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Sequence, Chains, Asymmetric and Biological Units

Title X-RAY CRYSTAL STRUCTURE OF XENON-PRESSURIZED PHENOL HYDROXYL PSEUDOMONAS SP. OX1
Keywords 4-HELIX BUNDLE, HYDROXYLASE, DIOXYGEN, HYDROCARBONS, OXIDORE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3U52     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PHENOL HYDROXYLASE COMPONENT PHN  A 494 4123 0
2  Protein   PHENOL HYDROXYLASE COMPONENT PHN  B 493 4110 0
3  Protein   PHENOL HYDROXYLASE COMPONENT PHL  C 318 2589 0
4  Protein   PHENOL HYDROXYLASE COMPONENT PHL  D 328 2659 0
5  Protein   PHENOL HYDROXYLASE COMPONENT PHO  E 118 925 0
6  Protein   PHENOL HYDROXYLASE COMPONENT PHO  F 118 925 0
7  Ligand   PHENOL HYDROXYLASE COMPONENT PHN  A 19 0 39
8  Ligand   PHENOL HYDROXYLASE COMPONENT PHN  B 19 0 55
9  Ligand   PHENOL HYDROXYLASE COMPONENT PHL  C 3 0 13
10  Ligand   PHENOL HYDROXYLASE COMPONENT PHL  D 2 0 7
11  Ligand   PHENOL HYDROXYLASE COMPONENT PHO  F 1 0 6
12 Water     588 0 588
total       2501 15331 708
Proteins
Unit 1 LYS6 LYS7 LEU8 ASN9 LEU10 LYS11 ASP12 LYS13 TYR14 GLN15 TYR16 LEU17 THR18 ARG19 ASP20 MET21 ALA22 TRP23 GLU24 PRO25 THR26 TYR27 GLN28 ASP29 LYS30 LYS31 ASP32 ILE33 PHE34 PRO35 GLU36 GLU37 ASP38 PHE39 GLU40 GLY41 ILE42 LYS43 ILE44 THR45 ASP46 TRP47 SER48 GLN49 TRP50 GLU51 ASP52 PRO53 PHE54 ARG55 LEU56 THR57 MET58 ASP59 ALA60 TYR61 TRP62 LYS63 TYR64 GLN65 ALA66 GLU67 LYS68 GLU69 LYS70 LYS71 LEU72 TYR73 ALA74 ILE75 PHE76 ASP77 ALA78 PHE79 ALA80 GLN81 ASN82 ASN83 GLY84 HIS85 GLN86 ASN87 ILE88 SER89 ASP90 ALA91 ARG92 TYR93 VAL94 ASN95 ALA96 LEU97 LYS98 LEU99 PHE100 ILE101 SER102 GLY103 ILE104 SER105 PRO106 LEU107 GLU108 HIS109 ALA110 ALA111 PHE112 GLN113 GLY114 TYR115 SER116 LYS117 VAL118 GLY119 ARG120 GLN121 PHE122 SER123 GLY124 ALA125 GLY126 ALA127 ARG128 VAL129 ALA130 CYS131 GLN132 MET133 GLN134 ALA135 ILE136 ASP137 GLU138 LEU139 ARG140 HIS141 SER142 GLN143 THR144 GLN145 GLN146 HIS147 ALA148 MET149 SER150 HIS151 TYR152 ASN153 LYS154 HIS155 PHE156 ASN157 GLY158 LEU159 HIS160 ASP161 GLY162 PRO163 HIS164 MET165 HIS166 ASP167 ARG168 VAL169 TRP170 TYR171 LEU172 SER173 VAL174 PRO175 LYS176 SER177 PHE178 PHE179 ASP180 ASP181 ALA182 ARG183 SER184 ALA185 GLY186 PRO187 PHE188 GLU189 PHE190 LEU191 THR192 ALA193 ILE194 SER195 PHE196 SER197 PHE198 GLU199 TYR200 VAL201 LEU202 THR203 ASN204 LEU205 LEU206 PHE207 VAL208 PRO209 PHE210 MET211 SER212 GLY213 ALA214 ALA215 TYR216 ASN217 GLY218 ASP219 MET220 ALA221 THR222 VAL223 THR224 PHE225 GLY226 PHE227 SER228 ALA229 GLN230 SER231 ASP232 GLU233 ALA234 ARG235 HIS236 MET237 THR238 LEU239 GLY240 LEU241 GLU242 VAL243 ILE244 LYS245 PHE246 ILE247 LEU248 GLU249 GLN250 HIS251 GLU252 ASP253 ASN254 VAL255 PRO256 ILE257 VAL258 GLN259 ARG260 TRP261 ILE262 ASP263 LYS264 TRP265 PHE266 TRP267 ARG268 GLY269 PHE270 ARG271 LEU272 LEU273 SER274 LEU275 VAL276 SER277 MET278 MET279 MET280 ASP281 TYR282 MET283 LEU284 PRO285 ASN286 LYS287 VAL288 MET289 SER290 TRP291 SER292 GLU293 ALA294 TRP295 GLU296 VAL297 TYR298 TYR299 GLU300 GLN301 ASN302 GLY303 GLY304 ALA305 LEU306 PHE307 LYS308 ASP309 LEU310 GLU311 ARG312 TYR313 GLY314 ILE315 ARG316 PRO317 PRO318 LYS319 TYR320 GLN321 ASP322 VAL323 ALA324 ASN325 ASP326 ALA327 LYS328 HIS329 HIS330 LEU331 SER332 HIS333 GLN334 LEU335 TRP336 THR337 THR338 PHE339 TYR340 GLN341 TYR342 CYS343 GLN344 ALA345 THR346 ASN347 PHE348 HIS349 THR350 TRP351 ILE352 PRO353 GLU354 LYS355 GLU356 GLU357 MET358 ASP359 TRP360 MET361 SER362 GLU363 LYS364 TYR365 PRO366 ASP367 THR368 PHE369 ASP370 LYS371 TYR372 TYR373 ARG374 PRO375 ARG376 TYR377 GLU378 TYR379 LEU380 ALA381 LYS382 GLU383 ALA384 ALA385 ALA386 GLY387 ARG388 ARG389 PHE390 TYR391 ASN392 ASN393 THR394 LEU395 PRO396 GLN397 LEU398 CYS399 GLN400 VAL401 CYS402 GLN403 ILE404 PRO405 THR406 ILE407 PHE408 THR409 GLU410 LYS411 ASP412 ALA413 PRO414 THR415 MET416 LEU417 SER418 HIS419 ARG420 GLN421 ILE422 GLU423 HIS424 GLU425 GLY426 GLU427 ARG428 TYR429 HIS430 PHE431 CYS432 SER433 ASP434 GLY435 CYS436 CYS437 ASP438 ILE439 PHE440 LYS441 HIS442 GLU443 PRO444 GLU445 LYS446 TYR447 ILE448 GLN449 ALA450 TRP451 LEU452 PRO453 VAL454 HIS455 GLN456 ILE457 TYR458 GLN459 GLY460 ASN461 CYS462 GLU463 GLY464 GLY465 ASP466 LEU467 GLU468 THR469 VAL470 VAL471 GLN472 LYS473 TYR474 TYR475 HIS476 ILE477 ASN478 ILE479 GLY480 GLU481 ASP482 ASN483 PHE484 ASP485 TYR486 VAL487 GLY488 SER489 PRO490 ASP491 GLN492 LYS493 HIS494 TRP495 LEU496 SER497 ILE498 LYS499
Unit 2 LYS6 LYS7 LEU8 ASN9 LEU10 LYS11 ASP12 LYS13 TYR14 GLN15 TYR16 LEU17 THR18 ARG19 ASP20 MET21 ALA22 TRP23 GLU24 PRO25 THR26 TYR27 GLN28 ASP29 LYS30 LYS31 ASP32 ILE33 PHE34 PRO35 GLU36 GLU37 ASP38 PHE39 GLU40 GLY41 ILE42 LYS43 ILE44 THR45 ASP46 TRP47 SER48 GLN49 TRP50 GLU51 ASP52 PRO53 PHE54 ARG55 LEU56 THR57 MET58 ASP59 ALA60 TYR61 TRP62 LYS63 TYR64 GLN65 ALA66 GLU67 LYS68 GLU69 LYS70 LYS71 LEU72 TYR73 ALA74 ILE75 PHE76 ASP77 ALA78 PHE79 ALA80 GLN81 ASN82 ASN83 GLY84 HIS85 GLN86 ASN87 ILE88 SER89 ASP90 ALA91 ARG92 TYR93 VAL94 ASN95 ALA96 LEU97 LYS98 LEU99 PHE100 ILE101 SER102 GLY103 ILE104 SER105 PRO106 LEU107 GLU108 HIS109 ALA110 ALA111 PHE112 GLN113 GLY114 TYR115 SER116 LYS117 VAL118 GLY119 ARG120 GLN121 PHE122 SER123 GLY124 ALA125 GLY126 ALA127 ARG128 VAL129 ALA130 CYS131 GLN132 MET133 GLN134 ALA135 ILE136 ASP137 GLU138 LEU139 ARG140 HIS141 SER142 GLN143 THR144 GLN145 GLN146 HIS147 ALA148 MET149 SER150 HIS151 TYR152 ASN153 LYS154 HIS155 PHE156 ASN157 GLY158 LEU159 HIS160 ASP161 GLY162 PRO163 HIS164 MET165 HIS166 ASP167 ARG168 VAL169 TRP170 TYR171 LEU172 SER173 VAL174 PRO175 LYS176 SER177 PHE178 PHE179 ASP180 ASP181 ALA182 ARG183 SER184 ALA185 GLY186 PRO187 PHE188 GLU189 PHE190 LEU191 THR192 ALA193 ILE194 SER195 PHE196 SER197 PHE198 GLU199 TYR200 VAL201 LEU202 THR203 ASN204 LEU205 LEU206 PHE207 VAL208 PRO209 PHE210 MET211 SER212 GLY213 ALA214 ALA215 TYR216 ASN217 GLY218 ASP219 MET220 ALA221 THR222 VAL223 THR224 PHE225 GLY226 PHE227 SER228 ALA229 GLN230 SER231 ASP232 GLU233 ALA234 ARG235 HIS236 MET237 THR238 LEU239 GLY240 LEU241 GLU242 VAL243 ILE244 LYS245 PHE246 ILE247 LEU248 GLU249 GLN250 HIS251 GLU252 ASP253 ASN254 VAL255 PRO256 ILE257 VAL258 GLN259 ARG260 TRP261 ILE262 ASP263 LYS264 TRP265 PHE266 TRP267 ARG268 GLY269 PHE270 ARG271 LEU272 LEU273 SER274 LEU275 VAL276 SER277 MET278 MET279 MET280 ASP281 TYR282 MET283 LEU284 PRO285 ASN286 LYS287 VAL288 MET289 SER290 TRP291 SER292 GLU293 ALA294 TRP295 GLU296 VAL297 TYR298 TYR299 GLU300 GLN301 ASN302 GLY303 GLY304 ALA305 LEU306 PHE307 LYS308 ASP309 LEU310 GLU311 ARG312 TYR313 GLY314 ILE315 ARG316 PRO317 PRO318 LYS319 TYR320 GLN321 ASP322 VAL323 ALA324 ASN325 ASP326 ALA327 LYS328 HIS329 HIS330 LEU331 SER332 HIS333 GLN334 LEU335 TRP336 THR337 THR338 PHE339 TYR340 GLN341 TYR342 CYS343 GLN344 ALA345 THR346 ASN347 PHE348 HIS349 THR350 TRP351 ILE352 PRO353 GLU354 LYS355 GLU356 GLU357 MET358 ASP359 TRP360 MET361 SER362 GLU363 LYS364 TYR365 PRO366 ASP367 THR368 PHE369 ASP370 LYS371 TYR372 TYR373 ARG374 PRO375 ARG376 TYR377 GLU378 TYR379 LEU380 ALA381 LYS382 GLU383 ALA384 ALA385 ALA386 GLY387 ARG388 ARG389 PHE390 TYR391 ASN392 ASN393 THR394 LEU395 PRO396 GLN397 LEU398 CYS399 GLN400 VAL401 CYS402 GLN403 ILE404 PRO405 THR406 ILE407 PHE408 THR409 GLU410 LYS411 ASP412 ALA413 PRO414 THR415 MET416 LEU417 SER418 HIS419 ARG420 GLN421 ILE422 GLU423 HIS424 GLU425 GLY426 GLU427 ARG428 TYR429 HIS430 PHE431 CYS432 SER433 ASP434 GLY435 CYS436 CYS437 ASP438 ILE439 PHE440 LYS441 HIS442 GLU443 PRO444 GLU445 LYS446 TYR447 ILE448 GLN449 ALA450 TRP451 LEU452 PRO453 VAL454 HIS455 GLN456 ILE457 TYR458 GLN459 GLY460 ASN461 CYS462 GLU463 GLY464 GLY465 ASP466 LEU467 GLU468 THR469 VAL470 VAL471 GLN472 LYS473 TYR474 TYR475 HIS476 ILE477 ASN478 ILE479 GLY480 GLU481 ASP482 ASN483 PHE484 ASP485 TYR486 VAL487 GLY488 SER489 PRO490 ASP491 GLN492 LYS493 HIS494 TRP495 LEU496 SER497 ILE498
Unit 3 PRO12 ILE13 ARG14 HIS15 THR16 TYR17 GLY18 HIS19 ILE20 ALA21 ARG22 ARG23 PHE24 GLY25 ASP26 LYS27 PRO28 ALA29 THR30 ARG31 TYR32 GLN33 GLU34 ALA35 SER36 TYR37 ASP38 ILE39 GLU40 ALA41 LYS42 THR43 ASN44 PHE45 HIS46 TYR47 ARG48 PRO49 GLN50 TRP51 ASP52 SER53 GLU54 HIS55 THR56 LEU57 ASN58 ASP59 PRO60 THR61 ARG62 THR63 ALA64 ILE65 ARG66 MET67 GLU68 ASP69 TRP70 CYS71 ALA72 VAL73 SER74 ASP75 PRO76 ARG77 GLN78 PHE79 TYR80 TYR81 GLY82 ALA83 TYR84 VAL85 GLY86 ASN87 ARG88 ALA89 LYS90 MET91 GLN92 GLU93 SER94 ALA95 GLU96 THR97 SER98 PHE99 GLY100 PHE101 CYS102 GLU103 LYS104 ARG105 ASN106 LEU107 LEU108 THR109 ARG110 LEU111 SER112 GLU113 GLU114 THR115 GLN116 LYS117 GLN118 LEU119 LEU120 ARG121 LEU122 LEU123 VAL124 PRO125 LEU126 ARG127 HIS128 VAL129 GLU130 LEU131 GLY132 ALA133 ASN134 MET135 ASN136 ASN137 ALA138 LYS139 ILE140 ALA141 GLY142 ASP143 ALA144 THR145 ALA146 THR147 THR148 VAL149 SER150 GLN151 MET152 HIS153 ILE154 TYR155 THR156 GLY157 MET158 ASP159 ARG160 LEU161 GLY162 ILE163 GLY164 GLN165 TYR166 LEU167 SER168 ARG169 ILE170 ALA171 LEU172 MET173 ILE174 ASP175 GLY176 SER177 THR178 GLY179 ALA180 ALA181 LEU182 ASP183 GLU184 SER185 LYS186 ALA187 TYR188 TRP189 MET190 ASP191 ASP192 GLU193 MET194 TRP195 GLN196 PRO197 MET198 ARG199 LYS200 LEU201 VAL202 GLU203 ASP204 THR205 LEU206 VAL207 VAL208 ASP209 ASP210 TRP211 PHE212 GLU213 LEU214 THR215 LEU216 VAL217 GLN218 ASN219 ILE220 LEU221 ILE222 ASP223 GLY224 MET225 MET226 TYR227 PRO228 LEU229 VAL230 TYR231 ASP232 LYS233 MET234 ASP235 GLN236 TRP237 PHE238 GLU239 SER240 GLN241 GLY242 ALA243 GLU244 ASP245 VAL246 SER247 MET248 LEU249 THR250 GLU251 PHE252 MET253 ARG254 ASP255 TRP256 TYR257 LYS258 GLU259 SER260 LEU261 ARG262 TRP263 THR264 ASN265 ALA266 MET267 MET268 LYS269 ALA270 VAL271 ALA272 GLY273 GLU274 SER275 GLU276 THR277 ASN278 ARG279 GLU280 LEU281 LEU282 GLN283 LYS284 TRP285 ILE286 ASP287 HIS288 TRP289 GLU290 PRO291 GLN292 ALA293 TYR294 GLU295 ALA296 LEU297 LYS298 PRO299 LEU300 ALA301 GLU302 ALA303 SER304 VAL305 GLY306 ILE307 ASP308 GLY309 LEU310 ASN311 GLU312 ALA313 ARG314 ALA315 GLU316 LEU317 SER318 ALA319 ARG320 LEU321 LYS322 LYS323 PHE324 GLU325 LEU326 GLN327 SER328 ARG329
Unit 4 GLU4 ILE5 LYS6 THR7 ASN8 SER9 VAL10 GLU11 PRO12 ILE13 ARG14 HIS15 THR16 TYR17 GLY18 HIS19 ILE20 ALA21 ARG22 ARG23 PHE24 GLY25 ASP26 LYS27 PRO28 ALA29 THR30 ARG31 TYR32 GLN33 GLU34 ALA35 SER36 TYR37 ASP38 ILE39 GLU40 ALA41 LYS42 THR43 ASN44 PHE45 HIS46 TYR47 ARG48 PRO49 GLN50 TRP51 ASP52 SER53 GLU54 HIS55 THR56 LEU57 ASN58 ASP59 PRO60 THR61 ARG62 THR63 ALA64 ILE65 ARG66 MET67 GLU68 ASP69 TRP70 CYS71 ALA72 VAL73 SER74 ASP75 PRO76 ARG77 GLN78 PHE79 TYR80 TYR81 GLY82 ALA83 TYR84 VAL85 GLY86 ASN87 ARG88 ALA89 LYS90 MET91 GLN92 GLU93 SER94 ALA95 GLU96 THR97 SER98 PHE99 GLY100 PHE101 CYS102 GLU103 LYS104 ARG105 ASN106 LEU107 LEU108 THR109 ARG110 LEU111 SER112 GLU113 GLU114 THR115 GLN116 LYS117 GLN118 LEU119 LEU120 ARG121 LEU122 LEU123 VAL124 PRO125 LEU126 ARG127 HIS128 VAL129 GLU130 LEU131 GLY132 ALA133 ASN134 MET135 ASN136 ASN137 ALA138 LYS139 ILE140 ALA141 GLY142 ASP143 ALA144 THR145 ALA146 THR147 THR148 VAL149 SER150 GLN151 MET152 HIS153 ILE154 TYR155 THR156 GLY157 MET158 ASP159 ARG160 LEU161 GLY162 ILE163 GLY164 GLN165 TYR166 LEU167 SER168 ARG169 ILE170 ALA171 LEU172 MET173 ILE174 ASP175 GLY176 SER177 THR178 GLY179 ALA180 ALA181 LEU182 ASP183 GLU184 SER185 LYS186 ALA187 TYR188 TRP189 MET190 ASP191 ASP192 GLU193 MET194 TRP195 GLN196 PRO197 MET198 ARG199 LYS200 LEU201 VAL202 GLU203 ASP204 THR205 LEU206 VAL207 VAL208 ASP209 ASP210 TRP211 PHE212 GLU213 LEU214 THR215 LEU216 VAL217 GLN218 ASN219 ILE220 LEU221 ILE222 ASP223 GLY224 MET225 MET226 TYR227 PRO228 LEU229 VAL230 TYR231 ASP232 LYS233 MET234 ASP235 GLN236 TRP237 PHE238 GLU239 SER240 GLN241 GLY242 ALA243 GLU244 ASP245 VAL246 SER247 MET248 LEU249 THR250 GLU251 PHE252 MET253 ARG254 ASP255 TRP256 TYR257 LYS258 GLU259 SER260 LEU261 ARG262 TRP263 THR264 ASN265 ALA266 MET267 MET268 LYS269 ALA270 VAL271 ALA272 GLY273 GLU274 SER275 GLU276 THR277 ASN278 ARG279 GLU280 LEU281 LEU282 GLN283 LYS284 TRP285 ILE286 ASP287 HIS288 TRP289 GLU290 PRO291 GLN292 ALA293 TYR294 GLU295 ALA296 LEU297 LYS298 PRO299 LEU300 ALA301 GLU302 ALA303 SER304 VAL305 GLY306 ILE307 ASP308 GLY309 LEU310 ASN311 GLU312 ALA313 ARG314 ALA315 GLU316 LEU317 SER318 ALA319 ARG320 LEU321 LYS322 LYS323 PHE324 GLU325 LEU326 GLN327 SER328 ARG329 GLY330 VAL331
Unit 5 SER2 VAL3 ASN4 ALA5 LEU6 TYR7 ASP8 TYR9 LYS10 PHE11 GLU12 PRO13 LYS14 ASP15 LYS16 VAL17 GLU18 ASN19 PHE20 HIS21 GLY22 MET23 GLN24 LEU25 LEU26 TYR27 VAL28 TYR29 TRP30 PRO31 ASP32 HIS33 LEU34 LEU35 PHE36 CYS37 ALA38 PRO39 PHE40 ALA41 LEU42 LEU43 VAL44 GLN45 PRO46 GLY47 MET48 THR49 PHE50 SER51 ALA52 LEU53 VAL54 ASP55 GLU56 ILE57 LEU58 LYS59 PRO60 ALA61 THR62 ALA63 ALA64 HIS65 PRO66 ASP67 SER68 ALA69 LYS70 ALA71 ASP72 PHE73 LEU74 ASN75 ALA76 GLU77 TRP78 LEU79 LEU80 ASN81 ASP82 GLU83 PRO84 PHE85 THR86 PRO87 LYS88 ALA89 ASP90 ALA91 SER92 LEU93 LYS94 GLU95 GLN96 GLY97 ILE98 ASP99 HIS100 LYS101 SER102 MET103 LEU104 THR105 VAL106 THR107 THR108 PRO109 GLY110 LEU111 LYS112 GLY113 MET114 ALA115 ASN116 ALA117 GLY118 TYR119
Unit 6 SER2 VAL3 ASN4 ALA5 LEU6 TYR7 ASP8 TYR9 LYS10 PHE11 GLU12 PRO13 LYS14 ASP15 LYS16 VAL17 GLU18 ASN19 PHE20 HIS21 GLY22 MET23 GLN24 LEU25 LEU26 TYR27 VAL28 TYR29 TRP30 PRO31 ASP32 HIS33 LEU34 LEU35 PHE36 CYS37 ALA38 PRO39 PHE40 ALA41 LEU42 LEU43 VAL44 GLN45 PRO46 GLY47 MET48 THR49 PHE50 SER51 ALA52 LEU53 VAL54 ASP55 GLU56 ILE57 LEU58 LYS59 PRO60 ALA61 THR62 ALA63 ALA64 HIS65 PRO66 ASP67 SER68 ALA69 LYS70 ALA71 ASP72 PHE73 LEU74 ASN75 ALA76 GLU77 TRP78 LEU79 LEU80 ASN81 ASP82 GLU83 PRO84 PHE85 THR86 PRO87 LYS88 ALA89 ASP90 ALA91 SER92 LEU93 LYS94 GLU95 GLN96 GLY97 ILE98 ASP99 HIS100 LYS101 SER102 MET103 LEU104 THR105 VAL106 THR107 THR108 PRO109 GLY110 LEU111 LYS112 GLY113 MET114 ALA115 ASN116 ALA117 GLY118 TYR119
Ligands
Unit 7 FE512 FE513 ZN514 CU515 GOL516 GOL517 GOL518 GOL519 XE520 XE521 XE522 XE523 XE524 XE525 XE526 XE527 XE528 XE529 XE530
Unit 8 FE512 FE513 ZN514 CU515 MPO516 EPE517 GOL518 GOL519 XE520 XE521 XE522 XE523 XE524 XE525 XE526 XE527 XE528 XE529 XE530
Unit 9 GOL334 GOL335 XE336
Unit 10 GOL334 XE335
Unit 11 GOL120
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany