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Title | CRYSTAL STRUCTURE OF BACILLUS THURINGIENSIS PLCR IN COMPLEX PEPTIDE PAPR7 AND DNA | |
Keywords | TERNARY COMPLEX, PLCR-PAPR7-DNA, HTH DNA-BINDING DOMAIN, QUO SENSING, HTH_3 (HELIX-TURN-HELIX) DOMAIN, TPR_1 (TETRATRICO REPEATS), PLEIOTROPIC REGULATOR, TRANSCRIPTION ACTIVATOR-DN | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3U3W | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | TRANSCRIPTIONAL ACTIVATOR PLCR PROTEIN | A | 280 | 2351 | 0 |
2 | Protein | TRANSCRIPTIONAL ACTIVATOR PLCR PROTEIN | B | 280 | 2351 | 0 |
3 | Protein | C-TERMINUS HEPTAPEPTIDE FROM PAPR PROTEIN | P | 7 | 60 | 0 |
4 | Protein | C-TERMINUS HEPTAPEPTIDE FROM PAPR PROTEIN | Q | 7 | 60 | 0 |
5 | Other macromolecule | 5'-D(P*CP*TP*AP*TP*GP*CP*AP*AP*TP*AP*TP*TP*TP*CP* )-3' | Y | 18 | 365 | 0 |
6 | Other macromolecule | 5'-D(P*AP*TP*AP*TP*GP*AP*AP*AP*TP*AP*TP*TP*GP*CP* )-3' | Z | 19 | 373 | 1 |
7 | Ligand | TRANSCRIPTIONAL ACTIVATOR PLCR PROTEIN | A | 1 | 0 | 1 |
8 | Ligand | TRANSCRIPTIONAL ACTIVATOR PLCR PROTEIN | B | 19 | 373 | 1 |
9 | Water | 255 | 0 | 255 | ||
total | 886 | 5933 | 258 |
Unit 1 | ALA3 GLU4 LYS5 LEU6 GLY7 SER8 GLU9 ILE10 LYS11 LYS12 ILE13 ARG14 VAL15 LEU16 ARG17 GLY18 LEU19 THR20 GLN21 LYS22 GLN23 LEU24 SER25 GLU26 ASN27 ILE28 CYS29 HIS30 GLN31 SER32 GLU33 VAL34 SER35 ARG36 ILE37 GLU38 SER39 GLY40 ALA41 VAL42 TYR43 PRO44 SER45 MET46 ASP47 ILE48 LEU49 GLN50 GLY51 ILE52 ALA53 ALA54 LYS55 LEU56 GLN57 ILE58 PRO59 ILE60 ILE61 HIS62 PHE63 TYR64 GLU65 VAL66 LEU67 ILE68 TYR69 SER70 ASP71 ILE72 GLU73 ARG74 LYS75 LYS76 GLN77 PHE78 LYS79 ASP80 GLN81 VAL82 ILE83 MET84 LEU85 CYS86 LYS87 GLN88 LYS89 ARG90 TYR91 LYS92 GLU93 ILE94 TYR95 ASN96 LYS97 VAL98 TRP99 ASN100 GLU101 LEU102 LYS103 LYS104 GLU105 GLU106 TYR107 HIS108 PRO109 GLU110 PHE111 GLN112 GLN113 PHE114 LEU115 GLN116 TRP117 GLN118 TYR119 TYR120 VAL121 ALA122 ALA123 TYR124 VAL125 LEU126 LYS127 LYS128 VAL129 ASP130 TYR131 GLU132 TYR133 CYS134 ILE135 LEU136 GLU137 LEU138 LYS139 LYS140 LEU141 LEU142 ASN143 GLN144 GLN145 LEU146 THR147 GLY148 ILE149 ASP150 VAL151 TYR152 GLN153 ASN154 LEU155 TYR156 ILE157 GLU158 ASN159 ALA160 ILE161 ALA162 ASN163 ILE164 TYR165 ALA166 GLU167 ASN168 GLY169 TYR170 LEU171 LYS172 LYS173 GLY174 ILE175 ASP176 LEU177 PHE178 GLU179 GLN180 ILE181 LEU182 LYS183 GLN184 LEU185 GLU186 ALA187 LEU188 HIS189 ASP190 ASN191 GLU192 GLU193 PHE194 ASP195 VAL196 LYS197 VAL198 ARG199 TYR200 ASN201 HIS202 ALA203 LYS204 ALA205 LEU206 TYR207 LEU208 ASP209 SER210 ARG211 TYR212 GLU213 GLU214 SER215 LEU216 TYR217 GLN218 VAL219 ASN220 LYS221 ALA222 ILE223 GLU224 ILE225 SER226 CYS227 ARG228 ILE229 ASN230 SER231 MET232 ALA233 LEU234 ILE235 GLY236 GLN237 LEU238 TYR239 TYR240 GLN241 ARG242 GLY243 GLU244 CYS245 LEU246 ARG247 LYS248 LEU249 GLU250 TYR251 GLU252 GLU253 ALA254 GLU255 ILE256 GLU257 ASP258 ALA259 TYR260 LYS261 LYS262 ALA263 SER264 PHE265 PHE266 PHE267 ASP268 ILE269 LEU270 GLU271 MET272 HIS273 ALA274 TYR275 LYS276 GLU277 ALA278 LEU279 VAL280 ASN281 LYS282 |
Unit 2 | ALA3 GLU4 LYS5 LEU6 GLY7 SER8 GLU9 ILE10 LYS11 LYS12 ILE13 ARG14 VAL15 LEU16 ARG17 GLY18 LEU19 THR20 GLN21 LYS22 GLN23 LEU24 SER25 GLU26 ASN27 ILE28 CYS29 HIS30 GLN31 SER32 GLU33 VAL34 SER35 ARG36 ILE37 GLU38 SER39 GLY40 ALA41 VAL42 TYR43 PRO44 SER45 MET46 ASP47 ILE48 LEU49 GLN50 GLY51 ILE52 ALA53 ALA54 LYS55 LEU56 GLN57 ILE58 PRO59 ILE60 ILE61 HIS62 PHE63 TYR64 GLU65 VAL66 LEU67 ILE68 TYR69 SER70 ASP71 ILE72 GLU73 ARG74 LYS75 LYS76 GLN77 PHE78 LYS79 ASP80 GLN81 VAL82 ILE83 MET84 LEU85 CYS86 LYS87 GLN88 LYS89 ARG90 TYR91 LYS92 GLU93 ILE94 TYR95 ASN96 LYS97 VAL98 TRP99 ASN100 GLU101 LEU102 LYS103 LYS104 GLU105 GLU106 TYR107 HIS108 PRO109 GLU110 PHE111 GLN112 GLN113 PHE114 LEU115 GLN116 TRP117 GLN118 TYR119 TYR120 VAL121 ALA122 ALA123 TYR124 VAL125 LEU126 LYS127 LYS128 VAL129 ASP130 TYR131 GLU132 TYR133 CYS134 ILE135 LEU136 GLU137 LEU138 LYS139 LYS140 LEU141 LEU142 ASN143 GLN144 GLN145 LEU146 THR147 GLY148 ILE149 ASP150 VAL151 TYR152 GLN153 ASN154 LEU155 TYR156 ILE157 GLU158 ASN159 ALA160 ILE161 ALA162 ASN163 ILE164 TYR165 ALA166 GLU167 ASN168 GLY169 TYR170 LEU171 LYS172 LYS173 GLY174 ILE175 ASP176 LEU177 PHE178 GLU179 GLN180 ILE181 LEU182 LYS183 GLN184 LEU185 GLU186 ALA187 LEU188 HIS189 ASP190 ASN191 GLU192 GLU193 PHE194 ASP195 VAL196 LYS197 VAL198 ARG199 TYR200 ASN201 HIS202 ALA203 LYS204 ALA205 LEU206 TYR207 LEU208 ASP209 SER210 ARG211 TYR212 GLU213 GLU214 SER215 LEU216 TYR217 GLN218 VAL219 ASN220 LYS221 ALA222 ILE223 GLU224 ILE225 SER226 CYS227 ARG228 ILE229 ASN230 SER231 MET232 ALA233 LEU234 ILE235 GLY236 GLN237 LEU238 TYR239 TYR240 GLN241 ARG242 GLY243 GLU244 CYS245 LEU246 ARG247 LYS248 LEU249 GLU250 TYR251 GLU252 GLU253 ALA254 GLU255 ILE256 GLU257 ASP258 ALA259 TYR260 LYS261 LYS262 ALA263 SER264 PHE265 PHE266 PHE267 ASP268 ILE269 LEU270 GLU271 MET272 HIS273 ALA274 TYR275 LYS276 GLU277 ALA278 LEU279 VAL280 ASN281 LYS282 |
Unit 3 | ALA501 ASP502 LEU503 PRO504 PHE505 GLU506 PHE507 |
Unit 4 | ALA501 ASP502 LEU503 PRO504 PHE505 GLU506 PHE507 |
Unit 5 | DC1 DT2 DA3 DT4 DG5 DC6 DA7 DA8 DT9 DA10 DT11 DT12 DT13 DC14 DA15 DT16 DA17 DT18 |
Unit 6 | DA1 DT2 DA3 DT4 DG5 DA6 DA7 DA8 DT9 DA10 DT11 DT12 DG13 DC14 DA15 DT16 DA17 DG18 CA1001 |
Unit 7 | CA1002 |
Unit 8 | DA1 DT2 DA3 DT4 DG5 DA6 DA7 DA8 DT9 DA10 DT11 DT12 DG13 DC14 DA15 DT16 DA17 DG18 CA1001 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |