3STC - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF LOOP 7 TRUNCATED MUTANT OF 3-DEOXY-D-MA OCTULOSONATE 8-PHOSPHATE SYNTHASE (KDO8PS) FROM NEISSERIA MENINGITIDIS
• Keywords: MANNO-OCTULOSONATE, SYNTHASE, LIPOPOLYSACCHARIDE, KDOP, KDO8 KDO8PS, TIM BARREL, BIOSYNTHESIS, TRANSFERASE, LYASE, LIPOPOLYSACCHARIDE BIOSYNTHESIS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3STC	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE	A	249	1904	0
2	Protein	2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE	B	254	1943	0
3	Protein	2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE	C	260	2005	0
4	Protein	2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE	D	259	1991	0
5	Ligand	2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE	A	1	0	1
6	Ligand	2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE	B	2	0	2
7	Ligand	2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE	C	3	0	3
8	Ligand	2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE	D	2	0	2
9	Water			699	0	699
total				1729	7843	707

Proteins

Unit 1	MET 1 ASP 2 ILE 3 LYS 4 ILE 5 ASN 6 ASP 7 ILE 8 THR 9 LEU 10 GLY 11 ASN 12 ASN 13 SER 14 PRO 15 PHE 16 VAL 17 LEU 18 PHE 19 GLY 20 GLY 21 ILE 22 ASN 23 VAL 24 LEU 25 GLU 26 SER 27 LEU 28 ASP 29 SER 30 THR 31 LEU 32 GLN 33 THR 34 CYS 35 ALA 36 HIS 37 TYR 38 VAL 39 GLU 40 VAL 41 THR 42 ARG 43 LYS 44 LEU 45 GLY 46 ILE 47 PRO 48 TYR 49 ILE 50 PHE 51 LYS 52 ALA 53 SER 54 PHE 55 ASP 56 LYS 57 ALA 58 ASN 59 ARG 60 SER 61 SER 62 ILE 63 HIS 64 SER 65 TYR 66 ARG 67 GLY 68 VAL 69 GLY 70 LEU 71 GLU 72 GLU 73 GLY 74 LEU 75 LYS 76 ILE 77 PHE 78 GLU 79 LYS 80 VAL 81 LYS 82 ALA 83 GLU 84 PHE 85 GLY 86 ILE 87 PRO 88 VAL 89 ILE 90 THR 91 ASP 92 VAL 93 HIS 94 GLU 95 PRO 96 HIS 97 GLN 98 CYS 99 GLN 100 PRO 101 VAL 102 ALA 103 GLU 104 VAL 105 CYS 106 ASP 107 VAL 108 ILE 109 GLN 110 LEU 111 PRO 112 ALA 113 PHE 114 LEU 115 ALA 116 ARG 117 GLN 118 THR 119 ASP 120 LEU 121 VAL 122 VAL 123 ALA 124 MET 125 ALA 126 LYS 127 THR 128 GLY 129 ASN 130 VAL 131 VAL 132 ASN 133 ILE 134 LYS 135 LYS 136 PRO 137 GLN 138 PHE 139 LEU 140 SER 141 PRO 142 SER 143 GLN 144 MET 145 LYS 146 ASN 147 ILE 148 VAL 149 GLU 150 LYS 151 PHE 152 HIS 153 GLU 154 ALA 155 GLY 156 ASN 157 GLY 158 LYS 159 LEU 160 ILE 161 LEU 162 CYS 163 GLU 164 ARG 165 GLY 166 SER 167 SER 168 PHE 169 GLY 170 TYR 171 ASP 172 ASN 173 LEU 174 VAL 175 VAL 176 ASP 177 MET 178 LEU 179 GLY 180 PHE 181 GLY 182 VAL 183 MET 184 LYS 185 GLN 186 THR 187 CYS 188 GLY 189 ASN 190 LEU 191 PRO 192 VAL 193 ILE 194 PHE 195 ASP 196 VAL 197 THR 198 HIS 199 SER 200 LEU 201 GLY 202 ARG 203 ARG 204 ALA 205 GLN 206 ALA 207 LEU 208 ASP 209 LEU 210 ALA 211 LEU 212 ALA 213 GLY 214 MET 215 ALA 216 THR 217 ARG 218 LEU 219 ALA 220 GLY 221 LEU 222 PHE 223 LEU 224 GLU 225 LEU 243 HIS 244 LEU 245 LEU 246 GLU 247 ASP 248 PHE 249 LEU 250 ILE 251 ARG 252 ILE 253 LYS 254 ALA 255 LEU 256 ASP 257 ASP 258 LEU 259 ILE 260 LYS 261 SER 262 GLN 263 PRO 264 ILE 265 LEU 266
Unit 2	MET 1 ASP 2 ILE 3 LYS 4 ILE 5 ASN 6 ASP 7 ILE 8 THR 9 LEU 10 GLY 11 ASN 12 ASN 13 SER 14 PRO 15 PHE 16 VAL 17 LEU 18 PHE 19 GLY 20 GLY 21 ILE 22 ASN 23 VAL 24 LEU 25 GLU 26 SER 27 LEU 28 ASP 29 SER 30 THR 31 LEU 32 GLN 33 THR 34 CYS 35 ALA 36 HIS 37 TYR 38 VAL 39 GLU 40 VAL 41 THR 42 ARG 43 LYS 44 LEU 45 GLY 46 ILE 47 PRO 48 TYR 49 ILE 50 PHE 51 LYS 52 ALA 53 SER 54 PHE 55 ASP 56 LYS 57 ALA 58 ASN 59 ARG 60 SER 61 SER 62 ILE 63 HIS 64 SER 65 TYR 66 ARG 67 GLY 68 VAL 69 GLY 70 LEU 71 GLU 72 GLU 73 GLY 74 LEU 75 LYS 76 ILE 77 PHE 78 GLU 79 LYS 80 VAL 81 LYS 82 ALA 83 GLU 84 PHE 85 GLY 86 ILE 87 PRO 88 VAL 89 ILE 90 THR 91 ASP 92 VAL 93 HIS 94 GLU 95 PRO 96 HIS 97 GLN 98 CYS 99 GLN 100 PRO 101 VAL 102 ALA 103 GLU 104 VAL 105 CYS 106 ASP 107 VAL 108 ILE 109 GLN 110 LEU 111 PRO 112 ALA 113 PHE 114 LEU 115 ALA 116 ARG 117 GLN 118 THR 119 ASP 120 LEU 121 VAL 122 VAL 123 ALA 124 MET 125 ALA 126 LYS 127 THR 128 GLY 129 ASN 130 VAL 131 VAL 132 ASN 133 ILE 134 LYS 135 LYS 136 PRO 137 GLN 138 PHE 139 LEU 140 SER 141 PRO 142 SER 143 GLN 144 MET 145 LYS 146 ASN 147 ILE 148 VAL 149 GLU 150 LYS 151 PHE 152 HIS 153 GLU 154 ALA 155 GLY 156 ASN 157 GLY 158 LYS 159 LEU 160 ILE 161 LEU 162 CYS 163 GLU 164 ARG 165 GLY 166 SER 167 SER 168 PHE 169 GLY 170 TYR 171 ASP 172 ASN 173 LEU 174 VAL 175 VAL 176 ASP 177 MET 178 LEU 179 GLY 180 PHE 181 GLY 182 VAL 183 MET 184 LYS 185 GLN 186 THR 187 CYS 188 GLY 189 ASN 190 LEU 191 PRO 192 VAL 193 ILE 194 PHE 195 ASP 196 VAL 197 THR 198 HIS 199 SER 200 LEU 201 GLY 202 ARG 203 ARG 204 ALA 205 GLN 206 ALA 207 LEU 208 ASP 209 LEU 210 ALA 211 LEU 212 ALA 213 GLY 214 MET 215 ALA 216 THR 217 ARG 218 LEU 219 ALA 220 GLY 221 LEU 222 PHE 223 LEU 224 GLU 225 SER 226 SER 239 ALA 240 LEU 241 PRO 242 LEU 243 HIS 244 LEU 245 LEU 246 GLU 247 ASP 248 PHE 249 LEU 250 ILE 251 ARG 252 ILE 253 LYS 254 ALA 255 LEU 256 ASP 257 ASP 258 LEU 259 ILE 260 LYS 261 SER 262 GLN 263 PRO 264 ILE 265 LEU 266
Unit 3	MET 1 ASP 2 ILE 3 LYS 4 ILE 5 ASN 6 ASP 7 ILE 8 THR 9 LEU 10 GLY 11 ASN 12 ASN 13 SER 14 PRO 15 PHE 16 VAL 17 LEU 18 PHE 19 GLY 20 GLY 21 ILE 22 ASN 23 VAL 24 LEU 25 GLU 26 SER 27 LEU 28 ASP 29 SER 30 THR 31 LEU 32 GLN 33 THR 34 CYS 35 ALA 36 HIS 37 TYR 38 VAL 39 GLU 40 VAL 41 THR 42 ARG 43 LYS 44 LEU 45 GLY 46 ILE 47 PRO 48 TYR 49 ILE 50 PHE 51 LYS 52 ALA 53 SER 54 PHE 55 ASP 56 LYS 57 ALA 58 ASN 59 ARG 60 SER 61 SER 62 ILE 63 HIS 64 SER 65 TYR 66 ARG 67 GLY 68 VAL 69 GLY 70 LEU 71 GLU 72 GLU 73 GLY 74 LEU 75 LYS 76 ILE 77 PHE 78 GLU 79 LYS 80 VAL 81 LYS 82 ALA 83 GLU 84 PHE 85 GLY 86 ILE 87 PRO 88 VAL 89 ILE 90 THR 91 ASP 92 VAL 93 HIS 94 GLU 95 PRO 96 HIS 97 GLN 98 CYS 99 GLN 100 PRO 101 VAL 102 ALA 103 GLU 104 VAL 105 CYS 106 ASP 107 VAL 108 ILE 109 GLN 110 LEU 111 PRO 112 ALA 113 PHE 114 LEU 115 ALA 116 ARG 117 GLN 118 THR 119 ASP 120 LEU 121 VAL 122 VAL 123 ALA 124 MET 125 ALA 126 LYS 127 THR 128 GLY 129 ASN 130 VAL 131 VAL 132 ASN 133 ILE 134 LYS 135 LYS 136 PRO 137 GLN 138 PHE 139 LEU 140 SER 141 PRO 142 SER 143 GLN 144 MET 145 LYS 146 ASN 147 ILE 148 VAL 149 GLU 150 LYS 151 PHE 152 HIS 153 GLU 154 ALA 155 GLY 156 ASN 157 GLY 158 LYS 159 LEU 160 ILE 161 LEU 162 CYS 163 GLU 164 ARG 165 GLY 166 SER 167 SER 168 PHE 169 GLY 170 TYR 171 ASP 172 ASN 173 LEU 174 VAL 175 VAL 176 ASP 177 MET 178 LEU 179 GLY 180 PHE 181 GLY 182 VAL 183 MET 184 LYS 185 GLN 186 THR 187 CYS 188 GLY 189 ASN 190 LEU 191 PRO 192 VAL 193 ILE 194 PHE 195 ASP 196 VAL 197 THR 198 HIS 199 SER 200 LEU 201 GLY 202 ARG 203 ARG 204 ALA 205 GLN 206 ALA 207 LEU 208 ASP 209 LEU 210 ALA 211 LEU 212 ALA 213 GLY 214 MET 215 ALA 216 THR 217 ARG 218 LEU 219 ALA 220 GLY 221 LEU 222 PHE 223 LEU 224 GLU 225 SER 226 HIS 227 PRO 228 ASP 229 PRO 238 SER 239 ALA 240 LEU 241 PRO 242 LEU 243 HIS 244 LEU 245 LEU 246 GLU 247 ASP 248 PHE 249 LEU 250 ILE 251 ARG 252 ILE 253 LYS 254 ALA 255 LEU 256 ASP 257 ASP 258 LEU 259 ILE 260 LYS 261 SER 262 GLN 263 PRO 264 ILE 265 LEU 266 THR 267 ILE 268
Unit 4	MET 1 ASP 2 ILE 3 LYS 4 ILE 5 ASN 6 ASP 7 ILE 8 THR 9 LEU 10 GLY 11 ASN 12 ASN 13 SER 14 PRO 15 PHE 16 VAL 17 LEU 18 PHE 19 GLY 20 GLY 21 ILE 22 ASN 23 VAL 24 LEU 25 GLU 26 SER 27 LEU 28 ASP 29 SER 30 THR 31 LEU 32 GLN 33 THR 34 CYS 35 ALA 36 HIS 37 TYR 38 VAL 39 GLU 40 VAL 41 THR 42 ARG 43 LYS 44 LEU 45 GLY 46 ILE 47 PRO 48 TYR 49 ILE 50 PHE 51 LYS 52 ALA 53 SER 54 PHE 55 ASP 56 LYS 57 ALA 58 ASN 59 ARG 60 SER 61 SER 62 ILE 63 HIS 64 SER 65 TYR 66 ARG 67 GLY 68 VAL 69 GLY 70 LEU 71 GLU 72 GLU 73 GLY 74 LEU 75 LYS 76 ILE 77 PHE 78 GLU 79 LYS 80 VAL 81 LYS 82 ALA 83 GLU 84 PHE 85 GLY 86 ILE 87 PRO 88 VAL 89 ILE 90 THR 91 ASP 92 VAL 93 HIS 94 GLU 95 PRO 96 HIS 97 GLN 98 CYS 99 GLN 100 PRO 101 VAL 102 ALA 103 GLU 104 VAL 105 CYS 106 ASP 107 VAL 108 ILE 109 GLN 110 LEU 111 PRO 112 ALA 113 PHE 114 LEU 115 ALA 116 ARG 117 GLN 118 THR 119 ASP 120 LEU 121 VAL 122 VAL 123 ALA 124 MET 125 ALA 126 LYS 127 THR 128 GLY 129 ASN 130 VAL 131 VAL 132 ASN 133 ILE 134 LYS 135 LYS 136 PRO 137 GLN 138 PHE 139 LEU 140 SER 141 PRO 142 SER 143 GLN 144 MET 145 LYS 146 ASN 147 ILE 148 VAL 149 GLU 150 LYS 151 PHE 152 HIS 153 GLU 154 ALA 155 GLY 156 ASN 157 GLY 158 LYS 159 LEU 160 ILE 161 LEU 162 CYS 163 GLU 164 ARG 165 GLY 166 SER 167 SER 168 PHE 169 GLY 170 TYR 171 ASP 172 ASN 173 LEU 174 VAL 175 VAL 176 ASP 177 MET 178 LEU 179 GLY 180 PHE 181 GLY 182 VAL 183 MET 184 LYS 185 GLN 186 THR 187 CYS 188 GLY 189 ASN 190 LEU 191 PRO 192 VAL 193 ILE 194 PHE 195 ASP 196 VAL 197 THR 198 HIS 199 SER 200 LEU 201 GLY 202 ARG 203 ARG 204 ALA 205 GLN 206 ALA 207 LEU 208 ASP 209 LEU 210 ALA 211 LEU 212 ALA 213 GLY 214 MET 215 ALA 216 THR 217 ARG 218 LEU 219 ALA 220 GLY 221 LEU 222 PHE 223 LEU 224 GLU 225 SER 226 HIS 227 PRO 228 PRO 238 SER 239 ALA 240 LEU 241 PRO 242 LEU 243 HIS 244 LEU 245 LEU 246 GLU 247 ASP 248 PHE 249 LEU 250 ILE 251 ARG 252 ILE 253 LYS 254 ALA 255 LEU 256 ASP 257 ASP 258 LEU 259 ILE 260 LYS 261 SER 262 GLN 263 PRO 264 ILE 265 LEU 266 THR 267 ILE 268

Ligands

Unit 5	CL 270
Unit 6	CL 270 CL 271
Unit 7	CL 270 CL 271 NA 272
Unit 8	CL 270 CL 271