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Title | CRYSTAL STRUCTURE OF RNA:DNA DODECAMER CORRESPONDING TO HIV- POLYPURINE TRACT, AT 1.6 A RESOLUTION. | |
Keywords | POLYPURINE TRACT (PPT) OF HIV-1; RNA-DNA HYBRID; REVERSE TRANSCRIPTION, RNA-DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3SSF | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 12 | 262 | 0 | |
2 | Other macromolecule | 5'-D(*CP*CP*TP*TP*TP*TP*CP*TP*TP*TP*TP*A)-3' | B | 12 | 235 | 0 |
3 | Ligand | 5'-R(*UP*AP*AP*AP*AP*GP*AP*AP*AP*AP*GP*G)-3' | A | 2 | 0 | 2 |
4 | Ligand | 5'-D(*CP*CP*TP*TP*TP*TP*CP*TP*TP*TP*TP*A)-3' | B | 1 | 0 | 1 |
5 | Water | 76 | 0 | 76 | ||
total | 103 | 497 | 79 |
Unit 1 | U1 A2 A3 A4 A5 G6 A7 A8 A9 A10 G11 G12 |
Unit 2 | DC13 DC14 DT15 DT16 DT17 DT18 DC19 DT20 DT21 DT22 DT23 DA24 |
Unit 3 | MG13 MG14 |
Unit 4 | MG1 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |