3SIT - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PORCINE CRW-8 ROTAVIRUS VP8* IN COMPLEX ACERAMIDO-GM3
• Keywords: BETA SANDWICH, LECTIN, GM3, SUGAR BINDING PROTEIN, VIRAL PRO
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3SIT	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	OUTER CAPSID PROTEIN VP4	A	163	1304	0
2	Protein	OUTER CAPSID PROTEIN VP4	B	161	1294	0
3	Ligand		C	3	0	43
4	Ligand		D	3	0	43
5	Ligand	OUTER CAPSID PROTEIN VP4	A	2	0	9
6	Ligand	OUTER CAPSID PROTEIN VP4	B	2	0	9
7	Water			327	0	327
total				661	2598	431

Proteins

Unit 1

GLY 62 SER 63 LEU 64 LEU 65 ASP 66 GLY 67 PRO 68 TYR 69 GLN 70 PRO 71 THR 72 THR 73 PHE 74 ASN 75 PRO 76 PRO 77 THR 78 SER 79 TYR 80 TRP 81 ILE 82 LEU 83 LEU 84 ALA 85 PRO 86 THR 87 VAL 88 GLU 89 GLY 90 VAL 91 VAL 92 ILE 93 GLN 94 GLY 95 THR 96 ASN 97 ASN 98 ILE 99 ASP 100 ARG 101 TRP 102 LEU 103 ALA 104 THR 105 ILE 106 LEU 107 ILE 108 GLU 109 PRO 110 ASN 111 VAL 112 GLN 113 THR 114 THR 115 ASN 116 ARG 117 ILE 118 TYR 119 ASN 120 LEU 121 PHE 122 GLY 123 GLN 124 GLN 125 VAL 126 THR 127 LEU 128 SER 129 VAL 130 GLU 131 ASN 132 THR 133 SER 134 GLN 135 THR 136 GLN 137 TRP 138 LYS 139 PHE 140 ILE 141 ASP 142 VAL 143 SER 144 LYS 145 THR 146 THR 147 PRO 148 THR 149 GLY 150 ASN 151 TYR 152 THR 153 GLN 154 HIS 155 GLY 156 PRO 157 LEU 158 PHE 159 SER 160 THR 161 PRO 162 LYS 163 LEU 164 TYR 165 ALA 166 VAL 167 MET 168 LYS 169 PHE 170 SER 171 GLY 172 ARG 173 ILE 174 TYR 175 THR 176 TYR 177 ASN 178 GLY 179 THR 180 THR 181 PRO 182 ASN 183 ALA 184 THR 185 THR 186 GLY 187 TYR 188 TYR 189 SER 190 THR 191 THR 192 ASN 193 TYR 194 ASP 195 THR 196 VAL 197 ASN 198 MET 199 THR 200 SER 201 PHE 202 CYS 203 ASP 204 PHE 205 TYR 206 ILE 207 ILE 208 PRO 209 ARG 210 ASN 211 GLN 212 GLU 213 GLU 214 LYS 215 CYS 216 THR 217 GLU 218 TYR 219 ILE 220 ASN 221 HIS 222 GLY 223 LEU 224

Unit 2

LEU 64 LEU 65 ASP 66 GLY 67 PRO 68 TYR 69 GLN 70 PRO 71 THR 72 THR 73 PHE 74 ASN 75 PRO 76 PRO 77 THR 78 SER 79 TYR 80 TRP 81 ILE 82 LEU 83 LEU 84 ALA 85 PRO 86 THR 87 VAL 88 GLU 89 GLY 90 VAL 91 VAL 92 ILE 93 GLN 94 GLY 95 THR 96 ASN 97 ASN 98 ILE 99 ASP 100 ARG 101 TRP 102 LEU 103 ALA 104 THR 105 ILE 106 LEU 107 ILE 108 GLU 109 PRO 110 ASN 111 VAL 112 GLN 113 THR 114 THR 115 ASN 116 ARG 117 ILE 118 TYR 119 ASN 120 LEU 121 PHE 122 GLY 123 GLN 124 GLN 125 VAL 126 THR 127 LEU 128 SER 129 VAL 130 GLU 131 ASN 132 THR 133 SER 134 GLN 135 THR 136 GLN 137 TRP 138 LYS 139 PHE 140 ILE 141 ASP 142 VAL 143 SER 144 LYS 145 THR 146 THR 147 PRO 148 THR 149 GLY 150 ASN 151 TYR 152 THR 153 GLN 154 HIS 155 GLY 156 PRO 157 LEU 158 PHE 159 SER 160 THR 161 PRO 162 LYS 163 LEU 164 TYR 165 ALA 166 VAL 167 MET 168 LYS 169 PHE 170 SER 171 GLY 172 ARG 173 ILE 174 TYR 175 THR 176 TYR 177 ASN 178 GLY 179 THR 180 THR 181 PRO 182 ASN 183 ALA 184 THR 185 THR 186 GLY 187 TYR 188 TYR 189 SER 190 THR 191 THR 192 ASN 193 TYR 194 ASP 195 THR 196 VAL 197 ASN 198 MET 199 THR 200 SER 201 PHE 202 CYS 203 ASP 204 PHE 205 TYR 206 ILE 207 ILE 208 PRO 209 ARG 210 ASN 211 GLN 212 GLU 213 GLU 214 LYS 215 CYS 216 THR 217 GLU 218 TYR 219 ILE 220 ASN 221 HIS 222 GLY 223 LEU 224

Ligands

Unit 3	GLC 1 GAL 2 SIA 3
Unit 4	GLC 1 GAL 2 SIA 3
Unit 5	NA 3000 MRD 4210
Unit 6	NA 3001 MRD 4210