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Sequence, Chains, Asymmetric and Biological Units

Title UNIQUE CARBOHYDRATE/CARBOHYDRATE INTERACTIONS ARE REQUIRED F AFFINITY BINDING OF FCGIII AND ANTIBODIES LACKING CORE FUCO
Keywords FC RECEPTOR, ANTIBODY, AFUCOSYLATION, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3SGK     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FC FRAGMENT  A 209 1668 0
2  Protein   FC FRAGMENT  B 212 1694 0
3  Protein   HUMAN FCG3A RECEPTOR  C 165 1331 0
4  Ligand    D 8 0 103
5  Ligand    E 8 0 103
6  Ligand    F 8 0 94
7  Ligand    G 2 0 28
8  Ligand   FC FRAGMENT  A 1 0 7
9 Water     135 0 135
total       748 4693 470
Proteins
Unit 1 GLY236 GLY237 PRO238 SER239 VAL240 PHE241 LEU242 PHE243 PRO244 PRO245 LYS246 PRO247 LYS248 ASP249 THR250 LEU251 MET252 ILE253 SER254 ARG255 THR256 PRO257 GLU258 VAL259 THR260 CYS261 VAL262 VAL263 VAL264 ASP265 VAL266 SER267 HIS268 GLU269 ASP270 PRO271 GLU272 VAL273 LYS274 PHE275 ASN276 TRP277 TYR278 VAL279 ASP280 GLY281 VAL282 GLU283 VAL284 HIS285 ASN286 ALA287 LYS288 THR289 LYS290 PRO291 ARG292 GLU293 GLU294 GLN295 TYR296 ASN297 SER298 THR299 TYR300 ARG301 VAL302 VAL303 SER304 VAL305 LEU306 THR307 VAL308 LEU309 HIS310 GLN311 ASP312 TRP313 LEU314 ASN315 GLY316 LYS317 GLU318 TYR319 LYS320 CYS321 LYS322 VAL323 SER324 ASN325 LYS326 ALA327 LEU328 PRO329 ALA330 PRO331 ILE332 GLU333 LYS334 THR335 ILE336 SER337 LYS338 ALA339 LYS340 GLY341 GLN342 PRO343 ARG344 GLU345 PRO346 GLN347 VAL348 TYR349 THR350 LEU351 PRO352 PRO353 SER354 ARG355 ASP356 GLU357 LEU358 THR359 LYS360 ASN361 GLN362 VAL363 SER364 LEU365 THR366 CYS367 LEU368 VAL369 LYS370 GLY371 PHE372 TYR373 PRO374 SER375 ASP376 ILE377 ALA378 VAL379 GLU380 TRP381 GLU382 SER383 ASN384 GLY385 GLN386 PRO387 GLU388 ASN389 ASN390 TYR391 LYS392 THR393 THR394 PRO395 PRO396 VAL397 LEU398 ASP399 SER400 ASP401 GLY402 SER403 PHE404 PHE405 LEU406 TYR407 SER408 LYS409 LEU410 THR411 VAL412 ASP413 LYS414 SER415 ARG416 TRP417 GLN418 GLN419 GLY420 ASN421 VAL422 PHE423 SER424 CYS425 SER426 VAL427 MET428 HIS429 GLU430 ALA431 LEU432 HIS433 ASN434 HIS435 TYR436 THR437 GLN438 LYS439 SER440 LEU441 SER442 LEU443 SER444
Unit 2 PRO232 GLU233 LEU234 LEU235 GLY236 GLY237 PRO238 SER239 VAL240 PHE241 LEU242 PHE243 PRO244 PRO245 LYS246 PRO247 LYS248 ASP249 THR250 LEU251 MET252 ILE253 SER254 ARG255 THR256 PRO257 GLU258 VAL259 THR260 CYS261 VAL262 VAL263 VAL264 ASP265 VAL266 SER267 HIS268 GLU269 ASP270 PRO271 GLU272 VAL273 LYS274 PHE275 ASN276 TRP277 TYR278 VAL279 ASP280 GLY281 VAL282 GLU283 VAL284 HIS285 ASN286 ALA287 LYS288 THR289 LYS290 PRO291 ARG292 GLU293 GLU294 GLN295 TYR296 ASN297 SER298 THR299 TYR300 ARG301 VAL302 VAL303 SER304 VAL305 LEU306 THR307 VAL308 LEU309 HIS310 GLN311 ASP312 TRP313 LEU314 ASN315 GLY316 LYS317 GLU318 TYR319 LYS320 CYS321 LYS322 VAL323 SER324 ASN325 LYS326 ALA327 LEU328 PRO329 ALA330 PRO331 ILE332 GLU333 LYS334 THR335 ILE336 SER337 LYS338 ALA339 LYS340 GLY341 GLN342 PRO343 ARG344 GLU345 PRO346 GLN347 VAL348 TYR349 THR350 LEU351 PRO352 PRO353 SER354 ARG355 ASP356 GLU357 LEU358 THR359 LYS360 ASN361 GLN362 VAL363 SER364 LEU365 THR366 CYS367 LEU368 VAL369 LYS370 GLY371 PHE372 TYR373 PRO374 SER375 ASP376 ILE377 ALA378 VAL379 GLU380 TRP381 GLU382 SER383 ASN384 GLY385 GLN386 PRO387 GLU388 ASN389 ASN390 TYR391 LYS392 THR393 THR394 PRO395 PRO396 VAL397 LEU398 ASP399 SER400 ASP401 GLY402 SER403 PHE404 PHE405 LEU406 TYR407 SER408 LYS409 LEU410 THR411 VAL412 ASP413 LYS414 SER415 ARG416 TRP417 GLN418 GLN419 GLY420 ASN421 VAL422 PHE423 SER424 CYS425 SER426 VAL427 MET428 HIS429 GLU430 ALA431 LEU432 HIS433 ASN434 HIS435 TYR436 THR437 GLN438 LYS439 SER440 LEU441 SER442 LEU443
Unit 3 LEU5 PRO6 LYS7 ALA8 VAL9 VAL10 PHE11 LEU12 GLU13 PRO14 GLN15 TRP16 TYR17 ARG18 VAL19 LEU20 GLU21 LYS22 ASP23 SER24 VAL25 THR26 LEU27 LYS28 CYS29 GLN30 GLY31 ALA32 GLN38 SER39 THR40 GLN41 TRP42 PHE43 HIS44 ASN45 GLU46 SER47 LEU48 ILE49 SER50 SER51 GLN52 ALA53 SER54 SER55 TYR56 PHE57 ILE58 ASP59 ALA60 ALA61 THR62 VAL63 ASP64 ASP65 SER66 GLY67 GLU68 TYR69 ARG70 CYS71 GLN72 THR73 GLN74 LEU75 SER76 THR77 LEU78 SER79 ASP80 PRO81 VAL82 GLN83 LEU84 GLU85 VAL86 HIS87 ILE88 GLY89 TRP90 LEU91 LEU92 LEU93 GLN94 ALA95 PRO96 ARG97 TRP98 VAL99 PHE100 LYS101 GLU102 GLU103 ASP104 PRO105 ILE106 HIS107 LEU108 ARG109 CYS110 HIS111 SER112 TRP113 LYS114 ASN115 THR116 ALA117 LEU118 HIS119 LYS120 VAL121 THR122 TYR123 LEU124 GLN125 ASN126 GLY127 LYS128 GLY129 ARG130 LYS131 TYR132 PHE133 HIS134 HIS135 ASN136 SER137 ASP138 PHE139 TYR140 ILE141 PRO142 LYS143 ALA144 THR145 LEU146 LYS147 ASP148 SER149 GLY150 SER151 TYR152 PHE153 CYS154 ARG155 GLY156 LEU157 VAL158 GLY159 SER160 LYS161 ASN162 VAL163 SER164 SER165 GLU166 THR167 VAL168 GLN169 ILE170 THR171 ILE172 THR173 GLN174
Ligands
Unit 4 NAG1 NAG2 BMA3 MAN4 NAG5 MAN6 NAG7 NAG8
Unit 5 NAG1 NAG2 BMA3 MAN4 NAG5 MAN6 NAG7 NAG8
Unit 6 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 MAN7 MAN8
Unit 7 NAG1 NAG2
Unit 8 MLI1
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany