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Sequence, Chains, Asymmetric and Biological Units

Title 2.65 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF DTDP-4-DEHYDRO REDUCTASE (RFBD) FROM BACILLUS ANTHRACIS STR. AMES IN COMPL NADP
Keywords DTDP-4-DEHYDRORHAMNOSE REDUCTASE, RFBD, STRUCTURAL GENOMICS, INFECTIOUS DISEASES, BACILLUS ANTHRACIS STR. AMES, RHAMNOSE BIOSYNTHETIC PATHWAY, CENTER FOR STRUCTURAL GENOMICS OF INF DISEASES, CSGID, ROSSMANN FOLD, CATALYZES FORMATION OF DTDP DEHYDRO-6-DEOXY-L-MANNOSE, NADPH AND H+ FROM DTDP-6-DEOXY-L AND NADP+, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3SC6     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  A 281 2265 0
2  Protein   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  B 280 2250 0
3  Protein   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  C 281 2264 0
4  Protein   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  D 283 2277 0
5  Protein   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  E 278 2251 0
6  Protein   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  F 281 2264 0
7  Ligand   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  A 3 0 58
8  Ligand   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  B 5 0 68
9  Ligand   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  C 3 0 58
10  Ligand   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  D 3 0 58
11  Ligand   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  E 5 0 68
12  Ligand   DTDP-4-DEHYDRORHAMNOSE REDUCTASE  F 4 0 63
13 Water     240 0 240
total       1947 13571 613
Proteins
Unit 1 LYS2 GLU3 ARG4 VAL5 ILE6 ILE7 THR8 GLY9 ALA10 ASN11 GLY12 GLN13 LEU14 GLY15 LYS16 GLN17 LEU18 GLN19 GLU20 GLU21 LEU22 ASN23 PRO24 GLU25 GLU26 TYR27 ASP28 ILE29 TYR30 PRO31 PHE32 ASP33 LYS34 LYS35 LEU36 LEU37 ASP38 ILE39 THR40 ASN41 ILE42 SER43 GLN44 VAL45 GLN46 GLN47 VAL48 VAL49 GLN50 GLU51 ILE52 ARG53 PRO54 HIS55 ILE56 ILE57 ILE58 HIS59 CYS60 ALA61 ALA62 TYR63 THR64 LYS65 VAL66 ASP67 GLN68 ALA69 GLU70 LYS71 GLU72 ARG73 ASP74 LEU75 ALA76 TYR77 VAL78 ILE79 ASN80 ALA81 ILE82 GLY83 ALA84 ARG85 ASN86 VAL87 ALA88 VAL89 ALA90 SER91 GLN92 LEU93 VAL94 GLY95 ALA96 LYS97 LEU98 VAL99 TYR100 ILE101 SER102 THR103 ASP104 TYR105 VAL106 PHE107 GLN108 GLY109 ASP110 ARG111 PRO112 GLU113 GLY114 TYR115 ASP116 GLU117 PHE118 HIS119 ASN120 PRO121 ALA122 PRO123 ILE124 ASN125 ILE126 TYR127 GLY128 ALA129 SER130 LYS131 TYR132 ALA133 GLY134 GLU135 GLN136 PHE137 VAL138 LYS139 GLU140 LEU141 HIS142 ASN143 LYS144 TYR145 PHE146 ILE147 VAL148 ARG149 THR150 SER151 TRP152 LEU153 TYR154 GLY155 LYS156 TYR157 GLY158 ASN159 ASN160 PHE161 VAL162 LYS163 THR164 MET165 ILE166 ARG167 LEU168 GLY169 LYS170 GLU171 ARG172 GLU173 GLU174 ILE175 SER176 VAL177 VAL178 ALA179 ASP180 GLN181 ILE182 GLY183 SER184 PRO185 THR186 TYR187 VAL188 ALA189 ASP190 LEU191 ASN192 VAL193 MET194 ILE195 ASN196 LYS197 LEU198 ILE199 HIS200 THR201 SER202 LEU203 TYR204 GLY205 THR206 TYR207 HIS208 VAL209 SER210 ASN211 THR212 GLY213 SER214 CYS215 SER216 TRP217 PHE218 GLU219 PHE220 ALA221 LYS222 LYS223 ILE224 PHE225 SER226 TYR227 ALA228 ASN229 MET230 LYS231 VAL232 ASN233 VAL234 LEU235 PRO236 VAL237 SER238 THR239 GLU240 GLU241 PHE242 GLY243 ALA244 ALA245 ALA246 ALA247 ARG248 PRO249 LYS250 TYR251 SER252 ILE253 PHE254 GLN255 HIS256 ASN257 MET258 LEU259 ARG260 LEU261 ASN262 GLY263 PHE264 LEU265 GLN266 MET267 PRO268 SER269 TRP270 GLU271 GLU272 GLY273 LEU274 GLU275 ARG276 PHE277 PHE278 ILE279 GLU280 THR281 LYS282
Unit 2 SER-2 ASN-1 ALA0 MET1 LYS2 GLU3 ARG4 VAL5 ILE6 ILE7 THR8 GLY9 ALA10 ASN11 GLY12 GLN13 LEU14 GLY15 LYS16 GLN17 LEU18 GLN19 GLU20 GLU21 LEU22 ASN23 PRO24 GLU25 GLU26 TYR27 ASP28 ILE29 TYR30 PRO31 PHE32 ASP33 LYS34 LYS35 LEU36 LEU37 ASP38 ILE39 THR40 ASN41 ILE42 SER43 GLN44 VAL45 GLN46 GLN47 VAL48 VAL49 GLN50 GLU51 ILE52 ARG53 PRO54 HIS55 ILE56 ILE57 ILE58 HIS59 CYS60 ALA61 ALA62 TYR63 THR64 LYS65 VAL66 ASP67 GLN68 ALA69 GLU70 LYS71 GLU72 ARG73 ASP74 LEU75 ALA76 TYR77 VAL78 ILE79 ASN80 ALA81 ILE82 GLY83 ALA84 ARG85 ASN86 VAL87 ALA88 VAL89 ALA90 SER91 GLN92 LEU93 VAL94 GLY95 ALA96 LYS97 LEU98 VAL99 TYR100 ILE101 SER102 THR103 ASP104 TYR105 VAL106 PHE107 GLN108 GLY109 ASP110 ARG111 PRO112 GLU113 GLY114 TYR115 ASP116 GLU117 PHE118 HIS119 ASN120 PRO121 ALA122 PRO123 ILE124 ASN125 ILE126 TYR127 GLY128 ALA129 SER130 LYS131 TYR132 ALA133 GLY134 GLU135 GLN136 PHE137 VAL138 LYS139 GLU140 LEU141 HIS142 ASN143 LYS144 TYR145 PHE146 ILE147 VAL148 ARG149 THR150 SER151 TRP152 LEU153 TYR154 GLY155 LYS156 TYR157 GLY158 ASN159 ASN160 PHE161 VAL162 LYS163 THR164 MET165 ILE166 ARG167 LEU168 GLY169 LYS170 GLU171 ARG172 GLU173 GLU174 ILE175 SER176 VAL177 VAL178 ALA179 ASP180 GLN181 ILE182 GLY183 SER184 PRO185 THR186 TYR187 VAL188 ALA189 ASP190 LEU191 ASN192 VAL193 MET194 ILE195 ASN196 LYS197 LEU198 ILE199 HIS200 THR201 SER202 LEU203 TYR204 GLY205 THR206 TYR207 HIS208 VAL209 SER210 ASN211 THR212 GLY213 SER214 CYS215 SER216 TRP217 PHE218 GLU219 PHE220 ALA221 LYS222 LYS223 ILE224 PHE225 SER226 TYR227 ALA228 ASN229 MET230 LYS231 VAL232 ASN233 VAL234 LEU235 PRO236 VAL237 SER238 THR239 ALA244 ALA245 ALA246 ALA247 ARG248 PRO249 LYS250 TYR251 SER252 ILE253 PHE254 GLN255 HIS256 ASN257 MET258 LEU259 ARG260 LEU261 ASN262 GLY263 PHE264 LEU265 GLN266 MET267 PRO268 SER269 TRP270 GLU271 GLU272 GLY273 LEU274 GLU275 ARG276 PHE277 PHE278 ILE279 GLU280 THR281
Unit 3 MET1 LYS2 GLU3 ARG4 VAL5 ILE6 ILE7 THR8 GLY9 ALA10 ASN11 GLY12 GLN13 LEU14 GLY15 LYS16 GLN17 LEU18 GLN19 GLU20 GLU21 LEU22 ASN23 PRO24 GLU25 GLU26 TYR27 ASP28 ILE29 TYR30 PRO31 PHE32 ASP33 LYS34 LYS35 LEU36 LEU37 ASP38 ILE39 THR40 ASN41 ILE42 SER43 GLN44 VAL45 GLN46 GLN47 VAL48 VAL49 GLN50 GLU51 ILE52 ARG53 PRO54 HIS55 ILE56 ILE57 ILE58 HIS59 CYS60 ALA61 ALA62 TYR63 THR64 LYS65 VAL66 ASP67 GLN68 ALA69 GLU70 LYS71 GLU72 ARG73 ASP74 LEU75 ALA76 TYR77 VAL78 ILE79 ASN80 ALA81 ILE82 GLY83 ALA84 ARG85 ASN86 VAL87 ALA88 VAL89 ALA90 SER91 GLN92 LEU93 VAL94 GLY95 ALA96 LYS97 LEU98 VAL99 TYR100 ILE101 SER102 THR103 ASP104 TYR105 VAL106 PHE107 GLN108 GLY109 ASP110 ARG111 PRO112 GLU113 GLY114 TYR115 ASP116 GLU117 PHE118 HIS119 ASN120 PRO121 ALA122 PRO123 ILE124 ASN125 ILE126 TYR127 GLY128 ALA129 SER130 LYS131 TYR132 ALA133 GLY134 GLU135 GLN136 PHE137 VAL138 LYS139 GLU140 LEU141 HIS142 ASN143 LYS144 TYR145 PHE146 ILE147 VAL148 ARG149 THR150 SER151 TRP152 LEU153 TYR154 GLY155 LYS156 TYR157 GLY158 ASN159 ASN160 PHE161 VAL162 LYS163 THR164 MET165 ILE166 ARG167 LEU168 GLY169 LYS170 GLU171 ARG172 GLU173 GLU174 ILE175 SER176 VAL177 VAL178 ALA179 ASP180 GLN181 ILE182 GLY183 SER184 PRO185 THR186 TYR187 VAL188 ALA189 ASP190 LEU191 ASN192 VAL193 MET194 ILE195 ASN196 LYS197 LEU198 ILE199 HIS200 THR201 SER202 LEU203 TYR204 GLY205 THR206 TYR207 HIS208 VAL209 SER210 ASN211 THR212 GLY213 SER214 CYS215 SER216 TRP217 PHE218 GLU219 PHE220 ALA221 LYS222 LYS223 ILE224 PHE225 SER226 TYR227 ALA228 ASN229 MET230 LYS231 VAL232 ASN233 VAL234 LEU235 PRO236 VAL237 SER238 THR239 GLU240 GLU241 PHE242 GLY243 ALA244 ALA245 ALA246 ALA247 ARG248 PRO249 LYS250 TYR251 SER252 ILE253 PHE254 GLN255 HIS256 ASN257 MET258 LEU259 ARG260 LEU261 ASN262 GLY263 PHE264 LEU265 GLN266 MET267 PRO268 SER269 TRP270 GLU271 GLU272 GLY273 LEU274 GLU275 ARG276 PHE277 PHE278 ILE279 GLU280 THR281
Unit 4 ASN-1 ALA0 MET1 LYS2 GLU3 ARG4 VAL5 ILE6 ILE7 THR8 GLY9 ALA10 ASN11 GLY12 GLN13 LEU14 GLY15 LYS16 GLN17 LEU18 GLN19 GLU20 GLU21 LEU22 ASN23 PRO24 GLU25 GLU26 TYR27 ASP28 ILE29 TYR30 PRO31 PHE32 ASP33 LYS34 LYS35 LEU36 LEU37 ASP38 ILE39 THR40 ASN41 ILE42 SER43 GLN44 VAL45 GLN46 GLN47 VAL48 VAL49 GLN50 GLU51 ILE52 ARG53 PRO54 HIS55 ILE56 ILE57 ILE58 HIS59 CYS60 ALA61 ALA62 TYR63 THR64 LYS65 VAL66 ASP67 GLN68 ALA69 GLU70 LYS71 GLU72 ARG73 ASP74 LEU75 ALA76 TYR77 VAL78 ILE79 ASN80 ALA81 ILE82 GLY83 ALA84 ARG85 ASN86 VAL87 ALA88 VAL89 ALA90 SER91 GLN92 LEU93 VAL94 GLY95 ALA96 LYS97 LEU98 VAL99 TYR100 ILE101 SER102 THR103 ASP104 TYR105 VAL106 PHE107 GLN108 GLY109 ASP110 ARG111 PRO112 GLU113 GLY114 TYR115 ASP116 GLU117 PHE118 HIS119 ASN120 PRO121 ALA122 PRO123 ILE124 ASN125 ILE126 TYR127 GLY128 ALA129 SER130 LYS131 TYR132 ALA133 GLY134 GLU135 GLN136 PHE137 VAL138 LYS139 GLU140 LEU141 HIS142 ASN143 LYS144 TYR145 PHE146 ILE147 VAL148 ARG149 THR150 SER151 TRP152 LEU153 TYR154 GLY155 LYS156 TYR157 GLY158 ASN159 ASN160 PHE161 VAL162 LYS163 THR164 MET165 ILE166 ARG167 LEU168 GLY169 LYS170 GLU171 ARG172 GLU173 GLU174 ILE175 SER176 VAL177 VAL178 ALA179 ASP180 GLN181 ILE182 GLY183 SER184 PRO185 THR186 TYR187 VAL188 ALA189 ASP190 LEU191 ASN192 VAL193 MET194 ILE195 ASN196 LYS197 LEU198 ILE199 HIS200 THR201 SER202 LEU203 TYR204 GLY205 THR206 TYR207 HIS208 VAL209 SER210 ASN211 THR212 GLY213 SER214 CYS215 SER216 TRP217 PHE218 GLU219 PHE220 ALA221 LYS222 LYS223 ILE224 PHE225 SER226 TYR227 ALA228 ASN229 MET230 LYS231 VAL232 ASN233 VAL234 LEU235 PRO236 VAL237 SER238 THR239 GLU240 GLU241 PHE242 GLY243 ALA244 ALA245 ALA246 ALA247 ARG248 PRO249 LYS250 TYR251 SER252 ILE253 PHE254 GLN255 HIS256 ASN257 MET258 LEU259 ARG260 LEU261 ASN262 GLY263 PHE264 LEU265 GLN266 MET267 PRO268 SER269 TRP270 GLU271 GLU272 GLY273 LEU274 GLU275 ARG276 PHE277 PHE278 ILE279 GLU280 THR281
Unit 5 LYS2 GLU3 ARG4 VAL5 ILE6 ILE7 THR8 GLY9 ALA10 ASN11 GLY12 GLN13 LEU14 GLY15 LYS16 GLN17 LEU18 GLN19 GLU20 GLU21 LEU22 ASN23 PRO24 GLU25 GLU26 TYR27 ASP28 ILE29 TYR30 PRO31 PHE32 ASP33 LYS34 LYS35 LEU36 LEU37 ASP38 ILE39 THR40 ASN41 ILE42 SER43 GLN44 VAL45 GLN46 GLN47 VAL48 VAL49 GLN50 GLU51 ILE52 ARG53 PRO54 HIS55 ILE56 ILE57 ILE58 HIS59 CYS60 ALA61 ALA62 TYR63 THR64 LYS65 VAL66 ASP67 GLN68 ALA69 GLU70 LYS71 GLU72 ARG73 ASP74 LEU75 ALA76 TYR77 VAL78 ILE79 ASN80 ALA81 ILE82 GLY83 ALA84 ARG85 ASN86 VAL87 ALA88 VAL89 ALA90 SER91 GLN92 LEU93 VAL94 GLY95 ALA96 LYS97 LEU98 VAL99 TYR100 ILE101 SER102 THR103 ASP104 TYR105 VAL106 PHE107 GLN108 GLY109 ASP110 ARG111 PRO112 GLU113 GLY114 TYR115 ASP116 GLU117 PHE118 HIS119 ASN120 PRO121 ALA122 PRO123 ILE124 ASN125 ILE126 TYR127 GLY128 ALA129 SER130 LYS131 TYR132 ALA133 GLY134 GLU135 GLN136 PHE137 VAL138 LYS139 GLU140 LEU141 HIS142 ASN143 LYS144 TYR145 PHE146 ILE147 VAL148 ARG149 THR150 SER151 TRP152 LEU153 TYR154 GLY155 LYS156 TYR157 GLY158 ASN159 ASN160 PHE161 VAL162 LYS163 THR164 MET165 ILE166 ARG167 LEU168 GLY169 LYS170 GLU171 ARG172 GLU173 GLU174 ILE175 SER176 VAL177 VAL178 ALA179 ASP180 GLN181 ILE182 GLY183 SER184 PRO185 THR186 TYR187 VAL188 ALA189 ASP190 LEU191 ASN192 VAL193 MET194 ILE195 ASN196 LYS197 LEU198 ILE199 HIS200 THR201 SER202 LEU203 TYR204 GLY205 THR206 TYR207 HIS208 VAL209 SER210 ASN211 THR212 GLY213 SER214 CYS215 SER216 TRP217 PHE218 GLU219 PHE220 ALA221 LYS222 LYS223 ILE224 PHE225 SER226 TYR227 ALA228 ASN229 MET230 LYS231 VAL232 ASN233 VAL234 LEU235 PRO236 VAL237 SER238 THR239 GLU240 GLU241 PHE242 ALA246 ALA247 ARG248 PRO249 LYS250 TYR251 SER252 ILE253 PHE254 GLN255 HIS256 ASN257 MET258 LEU259 ARG260 LEU261 ASN262 GLY263 PHE264 LEU265 GLN266 MET267 PRO268 SER269 TRP270 GLU271 GLU272 GLY273 LEU274 GLU275 ARG276 PHE277 PHE278 ILE279 GLU280 THR281 LYS282
Unit 6 MET1 LYS2 GLU3 ARG4 VAL5 ILE6 ILE7 THR8 GLY9 ALA10 ASN11 GLY12 GLN13 LEU14 GLY15 LYS16 GLN17 LEU18 GLN19 GLU20 GLU21 LEU22 ASN23 PRO24 GLU25 GLU26 TYR27 ASP28 ILE29 TYR30 PRO31 PHE32 ASP33 LYS34 LYS35 LEU36 LEU37 ASP38 ILE39 THR40 ASN41 ILE42 SER43 GLN44 VAL45 GLN46 GLN47 VAL48 VAL49 GLN50 GLU51 ILE52 ARG53 PRO54 HIS55 ILE56 ILE57 ILE58 HIS59 CYS60 ALA61 ALA62 TYR63 THR64 LYS65 VAL66 ASP67 GLN68 ALA69 GLU70 LYS71 GLU72 ARG73 ASP74 LEU75 ALA76 TYR77 VAL78 ILE79 ASN80 ALA81 ILE82 GLY83 ALA84 ARG85 ASN86 VAL87 ALA88 VAL89 ALA90 SER91 GLN92 LEU93 VAL94 GLY95 ALA96 LYS97 LEU98 VAL99 TYR100 ILE101 SER102 THR103 ASP104 TYR105 VAL106 PHE107 GLN108 GLY109 ASP110 ARG111 PRO112 GLU113 GLY114 TYR115 ASP116 GLU117 PHE118 HIS119 ASN120 PRO121 ALA122 PRO123 ILE124 ASN125 ILE126 TYR127 GLY128 ALA129 SER130 LYS131 TYR132 ALA133 GLY134 GLU135 GLN136 PHE137 VAL138 LYS139 GLU140 LEU141 HIS142 ASN143 LYS144 TYR145 PHE146 ILE147 VAL148 ARG149 THR150 SER151 TRP152 LEU153 TYR154 GLY155 LYS156 TYR157 GLY158 ASN159 ASN160 PHE161 VAL162 LYS163 THR164 MET165 ILE166 ARG167 LEU168 GLY169 LYS170 GLU171 ARG172 GLU173 GLU174 ILE175 SER176 VAL177 VAL178 ALA179 ASP180 GLN181 ILE182 GLY183 SER184 PRO185 THR186 TYR187 VAL188 ALA189 ASP190 LEU191 ASN192 VAL193 MET194 ILE195 ASN196 LYS197 LEU198 ILE199 HIS200 THR201 SER202 LEU203 TYR204 GLY205 THR206 TYR207 HIS208 VAL209 SER210 ASN211 THR212 GLY213 SER214 CYS215 SER216 TRP217 PHE218 GLU219 PHE220 ALA221 LYS222 LYS223 ILE224 PHE225 SER226 TYR227 ALA228 ASN229 MET230 LYS231 VAL232 ASN233 VAL234 LEU235 PRO236 VAL237 SER238 THR239 GLU240 GLU241 PHE242 GLY243 ALA244 ALA245 ALA246 ALA247 ARG248 PRO249 LYS250 TYR251 SER252 ILE253 PHE254 GLN255 HIS256 ASN257 MET258 LEU259 ARG260 LEU261 ASN262 GLY263 PHE264 LEU265 GLN266 MET267 PRO268 SER269 TRP270 GLU271 GLU272 GLY273 LEU274 GLU275 ARG276 PHE277 PHE278 ILE279 GLU280 THR281
Ligands
Unit 7 NAP285 SO4286 SO4287
Unit 8 NAP285 SO4286 SO4287 SO4288 SO4289
Unit 9 NAP285 SO4286 SO4287
Unit 10 NAP285 SO4286 SO4287
Unit 11 NAP285 SO4286 SO4287 SO4288 SO4289
Unit 12 NAP285 SO4286 SO4287 SO4288
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany