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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE MONOBODY YSMB-9 BOUND TO HUMAN SUMO
Keywords BETA SANDWICH, BETA GRASP, ANTIBODY MIMIC, ENGINEERED BINDIN PROTEIN, POST-TRANSLATIONAL MODIFICATION, PROTEIN BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MONOBODY YSMB-9  A 89 699 0
2  Protein   MONOBODY YSMB-9  B 89 699 0
3  Protein   SMALL UBIQUITIN-RELATED MODIFIER 1  C 75 620 0
4  Protein   SMALL UBIQUITIN-RELATED MODIFIER 1  D 78 636 0
5  Ligand   MONOBODY YSMB-9  B 2 0 12
6 Water     138 0 138
total       471 2654 150

Proteins
Unit 1 SER2 SER3 VAL4 PRO5 THR6 LYS7 LEU8 GLU9 VAL10 VAL11 ALA12 ALA13 THR14 PRO15 THR16 SER17 LEU18 LEU19 ILE20 SER21 TRP22 ASP23 ALA24 GLY25 TYR26 TRP27 PHE28 ILE29 ASP30 TYR31 TYR32 ARG33 ILE34 THR35 TYR36 GLY37 GLU38 THR39 GLY40 GLY41 ASN42 SER43 PRO44 VAL45 GLN46 GLU47 PHE48 THR49 VAL50 PRO51 GLY52 TYR53 SER54 SER55 THR56 ALA57 THR58 ILE59 SER60 GLY61 LEU62 SER63 PRO64 GLY65 VAL66 ASP67 TYR68 THR69 ILE70 THR71 VAL72 TYR73 ALA74 TYR75 TYR76 ASP77 ASN78 TYR79 GLY80 TRP81 SER82 PRO83 ILE84 SER85 ILE86 ASN87 TYR88 ARG89 THR90
Unit 2 SER2 SER3 VAL4 PRO5 THR6 LYS7 LEU8 GLU9 VAL10 VAL11 ALA12 ALA13 THR14 PRO15 THR16 SER17 LEU18 LEU19 ILE20 SER21 TRP22 ASP23 ALA24 GLY25 TYR26 TRP27 PHE28 ILE29 ASP30 TYR31 TYR32 ARG33 ILE34 THR35 TYR36 GLY37 GLU38 THR39 GLY40 GLY41 ASN42 SER43 PRO44 VAL45 GLN46 GLU47 PHE48 THR49 VAL50 PRO51 GLY52 TYR53 SER54 SER55 THR56 ALA57 THR58 ILE59 SER60 GLY61 LEU62 SER63 PRO64 GLY65 VAL66 ASP67 TYR68 THR69 ILE70 THR71 VAL72 TYR73 ALA74 TYR75 TYR76 ASP77 ASN78 TYR79 GLY80 TRP81 SER82 PRO83 ILE84 SER85 ILE86 ASN87 TYR88 ARG89 THR90
Unit 3 GLU20 TYR21 ILE22 LYS23 LEU24 LYS25 VAL26 ILE27 GLY28 GLN29 ASP30 SER31 SER32 GLU33 ILE34 HIS35 PHE36 LYS37 VAL38 LYS39 MET40 THR41 THR42 HIS43 LEU44 LYS45 LYS46 LEU47 LYS48 GLU49 SER50 TYR51 ALA52 GLN53 ARG54 GLN55 GLY56 VAL57 PRO58 MET59 ASN60 SER61 LEU62 ARG63 PHE64 LEU65 PHE66 GLU67 GLY68 GLN69 ARG70 ILE71 ALA72 ASP73 ASN74 HIS75 THR76 PRO77 LYS78 GLU79 LEU80 GLY81 MET82 GLU83 GLU84 GLU85 ASP86 VAL87 ILE88 GLU89 VAL90 TYR91 GLN92 GLU93 GLN94
Unit 4 GLU20 TYR21 ILE22 LYS23 LEU24 LYS25 VAL26 ILE27 GLY28 GLN29 ASP30 SER31 SER32 GLU33 ILE34 HIS35 PHE36 LYS37 VAL38 LYS39 MET40 THR41 THR42 HIS43 LEU44 LYS45 LYS46 LEU47 LYS48 GLU49 SER50 TYR51 ALA52 GLN53 ARG54 GLN55 GLY56 VAL57 PRO58 MET59 ASN60 SER61 LEU62 ARG63 PHE64 LEU65 PHE66 GLU67 GLY68 GLN69 ARG70 ILE71 ALA72 ASP73 ASN74 HIS75 THR76 PRO77 LYS78 GLU79 LEU80 GLY81 MET82 GLU83 GLU84 GLU85 ASP86 VAL87 ILE88 GLU89 VAL90 TYR91 GLN92 GLU93 GLN94 THR95 GLY96 GLY97

Ligands
Unit 5 GOL91 GOL92

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany