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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ANTI-HIV LLAMA VHH ANTIBODY A12 IN COMP C186 GP120
Keywords IG VH DOMAIN, ANTI-HIV, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3RJQ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   C186 GP120  A 292 2302 0
2  Protein   LLAMA VHH A12  B 127 976 0
3  Ligand   C186 GP120  A 8 0 112
total       427 3278 112

Proteins
Unit 1 TRP45 LYS46 GLU47 ALA48 LYS49 THR50 THR51 LEU52 PHE53 CYS54 ALA55 SER56 ASP57 ALA58 LYS59 ALA60 TYR61 GLU62 LYS63 GLU64 VAL65 HIS66 ASN67 VAL68 TRP69 ALA70 THR71 HIS72 ALA73 CYS74 VAL75 PRO76 THR77 ASP78 PRO79 ASN80 PRO81 GLN82 GLU83 MET84 VAL85 LEU86 ALA87 ASN88 VAL89 THR90 GLU91 ASN92 PHE93 ASN94 MET95 TRP96 LYS97 ASN98 ASP99 MET100 VAL101 GLU102 GLN103 MET104 HIS105 GLU106 ASP107 ILE108 ILE109 SER110 LEU111 TRP112 ASP113 GLU114 SER115 LEU116 LYS117 VAL208 SER209 PHE210 ASP211 PRO212 ILE213 PRO214 LEU215 HIS216 TYR217 CYS218 ALA219 PRO220 ALA221 GLY222 PHE223 ALA224 ILE225 LEU226 LYS227 CYS228 ASN229 ASN230 LYS231 THR232 PHE233 ASN234 GLY235 THR236 GLY237 PRO238 CYS239 ARG240 ASN241 VAL242 SER243 THR244 VAL245 GLN246 CYS247 THR248 HIS249 GLY250 ILE251 LYS252 PRO253 VAL254 VAL255 SER256 THR257 GLN258 LEU259 LEU260 LEU261 ASN262 GLY263 SER264 LEU265 ALA266 GLU267 GLU268 GLU269 ILE270 ILE271 ILE272 ARG273 SER274 GLU275 ASN276 LEU277 THR278 ASN279 ASN280 ALA281 LYS282 THR283 ILE284 ILE285 VAL286 HIS287 LEU288 ASN289 GLU290 SER291 VAL292 ASN293 ILE294 VAL295 CYS296 THR297 ARG298 ALA329 HIS330 CYS331 ASN332 ILE333 ASN334 GLU335 SER336 LYS337 TRP338 ASN339 ASN340 THR341 LEU342 GLN343 LYS344 VAL345 GLY346 GLU347 GLU348 LEU349 ALA350 LYS351 HIS352 PHE353 PRO354 SER356 LYS357 THR358 ILE359 LYS360 PHE361 GLU362 PRO363 SER364 SER365 GLY366 GLY367 ASP368 LEU369 GLU370 ILE371 THR372 THR373 HIS374 SER375 PHE376 ASN377 CYS378 ARG379 GLY380 GLU381 PHE382 PHE383 TYR384 CYS385 ASN386 THR387 SER388 ASP389 LEU390 PHE391 ASN392 GLY393 THR394 TYR395 ARG396 ASN397 GLY398 THR399 TYR400 ASN401 HIS402 THR403 GLY404 THR413 ILE414 THR415 LEU416 GLN417 CYS418 LYS419 ILE420 LYS421 GLN422 THR444 CYS445 ASN446 SER447 ASN448 ILE449 THR450 GLY451 LEU452 LEU453 LEU454 LEU455 ARG456 ASP457 GLY458 ASP464 THR465 GLU466 THR467 PHE468 ARG469 PRO470 GLY471 GLY472 GLY473 ASP474 MET475 ARG476 ASP477 ASN478 TRP479 ARG480 SER481 GLU482 LEU483 TYR484 LYS485 TYR486 LYS487 VAL488 VAL489 GLU490 ILE491
Unit 2 ALA1 VAL2 GLN3 LEU4 GLN5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 ALA14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 THR23 ALA24 SER25 GLY26 ARG27 ILE28 SER29 SER30 SER31 TYR32 ASP33 MET34 GLY35 TRP36 PHE37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLU44 ARG45 GLU46 PHE47 VAL48 ALA49 ALA50 ILE51 SER52 TRP52A SER53 GLY54 GLY55 THR56 THR57 ASP58 TYR59 ALA60 ASP61 SER62 VAL63 LYS64 GLY65 ARG66 PHE67 ALA68 ILE69 SER70 LYS71 ASP72 ASN73 ALA74 LYS75 ASN76 ALA77 VAL78 TYR79 LEU80 GLN81 MET82 ASN82A SER82B LEU82C LYS83 PRO84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 ALA93 ALA94 LYS95 TRP96 ARG97 PRO98 LEU99 ARG100 TYR100A SER100B ASP100C TYR100D PRO100E SER100F ASN100G SER100H ASP100I TYR100J TYR101 ASP102 TRP103 GLY104 GLN105 GLY106 THR107 GLN108 VAL109 THR110 VAL111 SER112 SER113

Ligands
Unit 3 NAG734 NAG741 NAG762 NAG776 NAG789 NAG886 NAG892 NAG897

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany