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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A PUTATIVE OXIDOREDUCTASE (SMA0793) FRO SINORHIZOBIUM MELILOTI 1021 AT 3.00 A RESOLUTION
Keywords FMN-BINDING SPLIT BARREL, NUDIX, STRUCTURAL GENOMICS, JOINT FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE BIOLOGY, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3RH7     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HYPOTHETICAL OXIDOREDUCTASE  A 292 2128 24
2  Protein   HYPOTHETICAL OXIDOREDUCTASE  B 286 2103 16
3  Protein   HYPOTHETICAL OXIDOREDUCTASE  C 286 2101 16
4  Protein   HYPOTHETICAL OXIDOREDUCTASE  D 286 2103 16
5  Protein   HYPOTHETICAL OXIDOREDUCTASE  E 291 2119 24
6  Protein   HYPOTHETICAL OXIDOREDUCTASE  F 286 2097 16
7  Ligand   HYPOTHETICAL OXIDOREDUCTASE  A 1 0 31
8  Ligand   HYPOTHETICAL OXIDOREDUCTASE  C 1 0 31
9  Ligand   HYPOTHETICAL OXIDOREDUCTASE  D 1 0 31
10  Ligand   HYPOTHETICAL OXIDOREDUCTASE  F 1 0 31
total       1731 12651 236

Proteins
Unit 1 THR-1 GLU0 MSE1 THR2 ALA3 GLU4 VAL5 PHE6 ASP7 PRO8 ARG9 ALA10 LEU11 ARG12 ASP13 ALA14 PHE15 GLY16 ALA17 PHE18 ALA19 THR20 GLY21 VAL22 THR23 VAL24 VAL25 THR26 ALA27 SER28 ASP29 ALA30 ALA31 GLY32 LYS33 PRO34 ILE35 GLY36 PHE37 THR38 ALA39 ASN40 SER41 PHE42 THR43 SER44 VAL45 SER46 LEU47 ASP48 PRO49 PRO50 LEU51 LEU52 LEU53 VAL54 CYS55 LEU56 ALA57 LYS58 SER59 SER60 ARG61 ASN62 TYR63 GLU64 SER65 MSE66 THR67 SER68 ALA69 GLY70 ARG71 PHE72 ALA73 ILE74 ASN75 VAL76 LEU77 SER78 GLU79 THR80 GLN81 LYS82 ASP83 VAL84 SER85 ASN86 THR87 PHE88 ALA89 ARG90 PRO91 VAL92 GLU93 ASP94 ARG95 PHE96 ALA97 ALA98 VAL99 ASP100 TRP101 ARG102 LEU103 GLY104 ARG105 ASP106 GLY107 CYS108 PRO109 ILE110 PHE111 SER112 ASP113 VAL114 ALA115 ALA116 TRP117 PHE118 GLU119 CYS120 SER121 MSE122 GLN123 ASP124 ILE125 ILE126 GLU127 ALA128 GLY129 ASP130 HIS131 VAL132 ILE133 ILE134 ILE135 GLY136 ARG137 VAL138 THR139 ALA140 PHE141 GLU142 ASN143 SER144 GLY145 LEU146 ASN147 GLY148 LEU149 GLY150 TYR151 ALA152 ARG153 GLY154 GLY155 TYR156 PHE157 THR158 PRO159 ARG160 LEU161 ALA162 GLY163 LYS164 ALA165 VAL166 SER167 ALA168 ALA169 VAL170 GLU171 GLY172 GLU173 ILE174 ARG175 LEU176 GLY177 ALA178 VAL179 LEU180 GLU181 GLN182 GLN183 GLY184 ALA185 VAL186 PHE187 LEU188 ALA189 GLY190 ASN191 GLU192 THR193 LEU194 SER195 LEU196 PRO197 ASN198 CYS199 THR200 VAL201 GLU202 GLY203 GLY204 ASP205 PRO206 ALA207 ARG208 THR209 LEU210 ALA211 ALA212 TYR213 LEU214 GLU215 GLN216 LEU217 THR218 GLY219 LEU220 ASN221 VAL222 THR223 ILE224 GLY225 PHE226 LEU227 TYR228 SER229 VAL230 TYR231 GLU232 ASP233 LYS234 SER235 ASP236 GLY237 ARG238 GLN239 ASN240 ILE241 VAL242 TYR243 HIS244 ALA245 LEU246 ALA247 SER248 ASP249 GLY250 ALA251 PRO252 ARG253 GLN254 GLY255 ARG256 PHE257 LEU258 ARG259 PRO260 ALA261 GLU262 LEU263 ALA264 ALA265 ALA266 LYS267 PHE268 SER269 SER270 SER271 ALA272 THR273 ALA274 ASP275 ILE276 ILE277 ASN278 ARG279 PHE280 VAL281 LEU282 GLU283 SER284 SER285 ILE286 GLY287 ASN288 PHE289 GLY290
Unit 2 VAL5 PHE6 ASP7 PRO8 ARG9 ALA10 LEU11 ARG12 ASP13 ALA14 PHE15 GLY16 ALA17 PHE18 ALA19 THR20 GLY21 VAL22 THR23 VAL24 VAL25 THR26 ALA27 SER28 ASP29 ALA30 ALA31 GLY32 LYS33 PRO34 ILE35 GLY36 PHE37 THR38 ALA39 ASN40 SER41 PHE42 THR43 SER44 VAL45 SER46 LEU47 ASP48 PRO49 PRO50 LEU51 LEU52 LEU53 VAL54 CYS55 LEU56 ALA57 LYS58 SER59 SER60 ARG61 ASN62 TYR63 GLU64 SER65 MSE66 THR67 SER68 ALA69 GLY70 ARG71 PHE72 ALA73 ILE74 ASN75 VAL76 LEU77 SER78 GLU79 THR80 GLN81 LYS82 ASP83 VAL84 SER85 ASN86 THR87 PHE88 ALA89 ARG90 PRO91 VAL92 GLU93 ASP94 ARG95 PHE96 ALA97 ALA98 VAL99 ASP100 TRP101 ARG102 LEU103 GLY104 ARG105 ASP106 GLY107 CYS108 PRO109 ILE110 PHE111 SER112 ASP113 VAL114 ALA115 ALA116 TRP117 PHE118 GLU119 CYS120 SER121 MSE122 GLN123 ASP124 ILE125 ILE126 GLU127 ALA128 GLY129 ASP130 HIS131 VAL132 ILE133 ILE134 ILE135 GLY136 ARG137 VAL138 THR139 ALA140 PHE141 GLU142 ASN143 SER144 GLY145 LEU146 ASN147 GLY148 LEU149 GLY150 TYR151 ALA152 ARG153 GLY154 GLY155 TYR156 PHE157 THR158 PRO159 ARG160 LEU161 ALA162 GLY163 LYS164 ALA165 VAL166 SER167 ALA168 ALA169 VAL170 GLU171 GLY172 GLU173 ILE174 ARG175 LEU176 GLY177 ALA178 VAL179 LEU180 GLU181 GLN182 GLN183 GLY184 ALA185 VAL186 PHE187 LEU188 ALA189 GLY190 ASN191 GLU192 THR193 LEU194 SER195 LEU196 PRO197 ASN198 CYS199 THR200 VAL201 GLU202 GLY203 GLY204 ASP205 PRO206 ALA207 ARG208 THR209 LEU210 ALA211 ALA212 TYR213 LEU214 GLU215 GLN216 LEU217 THR218 GLY219 LEU220 ASN221 VAL222 THR223 ILE224 GLY225 PHE226 LEU227 TYR228 SER229 VAL230 TYR231 GLU232 ASP233 LYS234 SER235 ASP236 GLY237 ARG238 GLN239 ASN240 ILE241 VAL242 TYR243 HIS244 ALA245 LEU246 ALA247 SER248 ASP249 GLY250 ALA251 PRO252 ARG253 GLN254 GLY255 ARG256 PHE257 LEU258 ARG259 PRO260 ALA261 GLU262 LEU263 ALA264 ALA265 ALA266 LYS267 PHE268 SER269 SER270 SER271 ALA272 THR273 ALA274 ASP275 ILE276 ILE277 ASN278 ARG279 PHE280 VAL281 LEU282 GLU283 SER284 SER285 ILE286 GLY287 ASN288 PHE289 GLY290
Unit 3 VAL5 PHE6 ASP7 PRO8 ARG9 ALA10 LEU11 ARG12 ASP13 ALA14 PHE15 GLY16 ALA17 PHE18 ALA19 THR20 GLY21 VAL22 THR23 VAL24 VAL25 THR26 ALA27 SER28 ASP29 ALA30 ALA31 GLY32 LYS33 PRO34 ILE35 GLY36 PHE37 THR38 ALA39 ASN40 SER41 PHE42 THR43 SER44 VAL45 SER46 LEU47 ASP48 PRO49 PRO50 LEU51 LEU52 LEU53 VAL54 CYS55 LEU56 ALA57 LYS58 SER59 SER60 ARG61 ASN62 TYR63 GLU64 SER65 MSE66 THR67 SER68 ALA69 GLY70 ARG71 PHE72 ALA73 ILE74 ASN75 VAL76 LEU77 SER78 GLU79 THR80 GLN81 LYS82 ASP83 VAL84 SER85 ASN86 THR87 PHE88 ALA89 ARG90 PRO91 VAL92 GLU93 ASP94 ARG95 PHE96 ALA97 ALA98 VAL99 ASP100 TRP101 ARG102 LEU103 GLY104 ARG105 ASP106 GLY107 CYS108 PRO109 ILE110 PHE111 SER112 ASP113 VAL114 ALA115 ALA116 TRP117 PHE118 GLU119 CYS120 SER121 MSE122 GLN123 ASP124 ILE125 ILE126 GLU127 ALA128 GLY129 ASP130 HIS131 VAL132 ILE133 ILE134 ILE135 GLY136 ARG137 VAL138 THR139 ALA140 PHE141 GLU142 ASN143 SER144 GLY145 LEU146 ASN147 GLY148 LEU149 GLY150 TYR151 ALA152 ARG153 GLY154 GLY155 TYR156 PHE157 THR158 PRO159 ARG160 LEU161 ALA162 GLY163 LYS164 ALA165 VAL166 SER167 ALA168 ALA169 VAL170 GLU171 GLY172 GLU173 ILE174 ARG175 LEU176 GLY177 ALA178 VAL179 LEU180 GLU181 GLN182 GLN183 GLY184 ALA185 VAL186 PHE187 LEU188 ALA189 GLY190 ASN191 GLU192 THR193 LEU194 SER195 LEU196 PRO197 ASN198 CYS199 THR200 VAL201 GLU202 GLY203 GLY204 ASP205 PRO206 ALA207 ARG208 THR209 LEU210 ALA211 ALA212 TYR213 LEU214 GLU215 GLN216 LEU217 THR218 GLY219 LEU220 ASN221 VAL222 THR223 ILE224 GLY225 PHE226 LEU227 TYR228 SER229 VAL230 TYR231 GLU232 ASP233 LYS234 SER235 ASP236 GLY237 ARG238 GLN239 ASN240 ILE241 VAL242 TYR243 HIS244 ALA245 LEU246 ALA247 SER248 ASP249 GLY250 ALA251 PRO252 ARG253 GLN254 GLY255 ARG256 PHE257 LEU258 ARG259 PRO260 ALA261 GLU262 LEU263 ALA264 ALA265 ALA266 LYS267 PHE268 SER269 SER270 SER271 ALA272 THR273 ALA274 ASP275 ILE276 ILE277 ASN278 ARG279 PHE280 VAL281 LEU282 GLU283 SER284 SER285 ILE286 GLY287 ASN288 PHE289 GLY290
Unit 4 VAL5 PHE6 ASP7 PRO8 ARG9 ALA10 LEU11 ARG12 ASP13 ALA14 PHE15 GLY16 ALA17 PHE18 ALA19 THR20 GLY21 VAL22 THR23 VAL24 VAL25 THR26 ALA27 SER28 ASP29 ALA30 ALA31 GLY32 LYS33 PRO34 ILE35 GLY36 PHE37 THR38 ALA39 ASN40 SER41 PHE42 THR43 SER44 VAL45 SER46 LEU47 ASP48 PRO49 PRO50 LEU51 LEU52 LEU53 VAL54 CYS55 LEU56 ALA57 LYS58 SER59 SER60 ARG61 ASN62 TYR63 GLU64 SER65 MSE66 THR67 SER68 ALA69 GLY70 ARG71 PHE72 ALA73 ILE74 ASN75 VAL76 LEU77 SER78 GLU79 THR80 GLN81 LYS82 ASP83 VAL84 SER85 ASN86 THR87 PHE88 ALA89 ARG90 PRO91 VAL92 GLU93 ASP94 ARG95 PHE96 ALA97 ALA98 VAL99 ASP100 TRP101 ARG102 LEU103 GLY104 ARG105 ASP106 GLY107 CYS108 PRO109 ILE110 PHE111 SER112 ASP113 VAL114 ALA115 ALA116 TRP117 PHE118 GLU119 CYS120 SER121 MSE122 GLN123 ASP124 ILE125 ILE126 GLU127 ALA128 GLY129 ASP130 HIS131 VAL132 ILE133 ILE134 ILE135 GLY136 ARG137 VAL138 THR139 ALA140 PHE141 GLU142 ASN143 SER144 GLY145 LEU146 ASN147 GLY148 LEU149 GLY150 TYR151 ALA152 ARG153 GLY154 GLY155 TYR156 PHE157 THR158 PRO159 ARG160 LEU161 ALA162 GLY163 LYS164 ALA165 VAL166 SER167 ALA168 ALA169 VAL170 GLU171 GLY172 GLU173 ILE174 ARG175 LEU176 GLY177 ALA178 VAL179 LEU180 GLU181 GLN182 GLN183 GLY184 ALA185 VAL186 PHE187 LEU188 ALA189 GLY190 ASN191 GLU192 THR193 LEU194 SER195 LEU196 PRO197 ASN198 CYS199 THR200 VAL201 GLU202 GLY203 GLY204 ASP205 PRO206 ALA207 ARG208 THR209 LEU210 ALA211 ALA212 TYR213 LEU214 GLU215 GLN216 LEU217 THR218 GLY219 LEU220 ASN221 VAL222 THR223 ILE224 GLY225 PHE226 LEU227 TYR228 SER229 VAL230 TYR231 GLU232 ASP233 LYS234 SER235 ASP236 GLY237 ARG238 GLN239 ASN240 ILE241 VAL242 TYR243 HIS244 ALA245 LEU246 ALA247 SER248 ASP249 GLY250 ALA251 PRO252 ARG253 GLN254 GLY255 ARG256 PHE257 LEU258 ARG259 PRO260 ALA261 GLU262 LEU263 ALA264 ALA265 ALA266 LYS267 PHE268 SER269 SER270 SER271 ALA272 THR273 ALA274 ASP275 ILE276 ILE277 ASN278 ARG279 PHE280 VAL281 LEU282 GLU283 SER284 SER285 ILE286 GLY287 ASN288 PHE289 GLY290
Unit 5 GLU0 MSE1 THR2 ALA3 GLU4 VAL5 PHE6 ASP7 PRO8 ARG9 ALA10 LEU11 ARG12 ASP13 ALA14 PHE15 GLY16 ALA17 PHE18 ALA19 THR20 GLY21 VAL22 THR23 VAL24 VAL25 THR26 ALA27 SER28 ASP29 ALA30 ALA31 GLY32 LYS33 PRO34 ILE35 GLY36 PHE37 THR38 ALA39 ASN40 SER41 PHE42 THR43 SER44 VAL45 SER46 LEU47 ASP48 PRO49 PRO50 LEU51 LEU52 LEU53 VAL54 CYS55 LEU56 ALA57 LYS58 SER59 SER60 ARG61 ASN62 TYR63 GLU64 SER65 MSE66 THR67 SER68 ALA69 GLY70 ARG71 PHE72 ALA73 ILE74 ASN75 VAL76 LEU77 SER78 GLU79 THR80 GLN81 LYS82 ASP83 VAL84 SER85 ASN86 THR87 PHE88 ALA89 ARG90 PRO91 VAL92 GLU93 ASP94 ARG95 PHE96 ALA97 ALA98 VAL99 ASP100 TRP101 ARG102 LEU103 GLY104 ARG105 ASP106 GLY107 CYS108 PRO109 ILE110 PHE111 SER112 ASP113 VAL114 ALA115 ALA116 TRP117 PHE118 GLU119 CYS120 SER121 MSE122 GLN123 ASP124 ILE125 ILE126 GLU127 ALA128 GLY129 ASP130 HIS131 VAL132 ILE133 ILE134 ILE135 GLY136 ARG137 VAL138 THR139 ALA140 PHE141 GLU142 ASN143 SER144 GLY145 LEU146 ASN147 GLY148 LEU149 GLY150 TYR151 ALA152 ARG153 GLY154 GLY155 TYR156 PHE157 THR158 PRO159 ARG160 LEU161 ALA162 GLY163 LYS164 ALA165 VAL166 SER167 ALA168 ALA169 VAL170 GLU171 GLY172 GLU173 ILE174 ARG175 LEU176 GLY177 ALA178 VAL179 LEU180 GLU181 GLN182 GLN183 GLY184 ALA185 VAL186 PHE187 LEU188 ALA189 GLY190 ASN191 GLU192 THR193 LEU194 SER195 LEU196 PRO197 ASN198 CYS199 THR200 VAL201 GLU202 GLY203 GLY204 ASP205 PRO206 ALA207 ARG208 THR209 LEU210 ALA211 ALA212 TYR213 LEU214 GLU215 GLN216 LEU217 THR218 GLY219 LEU220 ASN221 VAL222 THR223 ILE224 GLY225 PHE226 LEU227 TYR228 SER229 VAL230 TYR231 GLU232 ASP233 LYS234 SER235 ASP236 GLY237 ARG238 GLN239 ASN240 ILE241 VAL242 TYR243 HIS244 ALA245 LEU246 ALA247 SER248 ASP249 GLY250 ALA251 PRO252 ARG253 GLN254 GLY255 ARG256 PHE257 LEU258 ARG259 PRO260 ALA261 GLU262 LEU263 ALA264 ALA265 ALA266 LYS267 PHE268 SER269 SER270 SER271 ALA272 THR273 ALA274 ASP275 ILE276 ILE277 ASN278 ARG279 PHE280 VAL281 LEU282 GLU283 SER284 SER285 ILE286 GLY287 ASN288 PHE289 GLY290
Unit 6 VAL5 PHE6 ASP7 PRO8 ARG9 ALA10 LEU11 ARG12 ASP13 ALA14 PHE15 GLY16 ALA17 PHE18 ALA19 THR20 GLY21 VAL22 THR23 VAL24 VAL25 THR26 ALA27 SER28 ASP29 ALA30 ALA31 GLY32 LYS33 PRO34 ILE35 GLY36 PHE37 THR38 ALA39 ASN40 SER41 PHE42 THR43 SER44 VAL45 SER46 LEU47 ASP48 PRO49 PRO50 LEU51 LEU52 LEU53 VAL54 CYS55 LEU56 ALA57 LYS58 SER59 SER60 ARG61 ASN62 TYR63 GLU64 SER65 MSE66 THR67 SER68 ALA69 GLY70 ARG71 PHE72 ALA73 ILE74 ASN75 VAL76 LEU77 SER78 GLU79 THR80 GLN81 LYS82 ASP83 VAL84 SER85 ASN86 THR87 PHE88 ALA89 ARG90 PRO91 VAL92 GLU93 ASP94 ARG95 PHE96 ALA97 ALA98 VAL99 ASP100 TRP101 ARG102 LEU103 GLY104 ARG105 ASP106 GLY107 CYS108 PRO109 ILE110 PHE111 SER112 ASP113 VAL114 ALA115 ALA116 TRP117 PHE118 GLU119 CYS120 SER121 MSE122 GLN123 ASP124 ILE125 ILE126 GLU127 ALA128 GLY129 ASP130 HIS131 VAL132 ILE133 ILE134 ILE135 GLY136 ARG137 VAL138 THR139 ALA140 PHE141 GLU142 ASN143 SER144 GLY145 LEU146 ASN147 GLY148 LEU149 GLY150 TYR151 ALA152 ARG153 GLY154 GLY155 TYR156 PHE157 THR158 PRO159 ARG160 LEU161 ALA162 GLY163 LYS164 ALA165 VAL166 SER167 ALA168 ALA169 VAL170 GLU171 GLY172 GLU173 ILE174 ARG175 LEU176 GLY177 ALA178 VAL179 LEU180 GLU181 GLN182 GLN183 GLY184 ALA185 VAL186 PHE187 LEU188 ALA189 GLY190 ASN191 GLU192 THR193 LEU194 SER195 LEU196 PRO197 ASN198 CYS199 THR200 VAL201 GLU202 GLY203 GLY204 ASP205 PRO206 ALA207 ARG208 THR209 LEU210 ALA211 ALA212 TYR213 LEU214 GLU215 GLN216 LEU217 THR218 GLY219 LEU220 ASN221 VAL222 THR223 ILE224 GLY225 PHE226 LEU227 TYR228 SER229 VAL230 TYR231 GLU232 ASP233 LYS234 SER235 ASP236 GLY237 ARG238 GLN239 ASN240 ILE241 VAL242 TYR243 HIS244 ALA245 LEU246 ALA247 SER248 ASP249 GLY250 ALA251 PRO252 ARG253 GLN254 GLY255 ARG256 PHE257 LEU258 ARG259 PRO260 ALA261 GLU262 LEU263 ALA264 ALA265 ALA266 LYS267 PHE268 SER269 SER270 SER271 ALA272 THR273 ALA274 ASP275 ILE276 ILE277 ASN278 ARG279 PHE280 VAL281 LEU282 GLU283 SER284 SER285 ILE286 GLY287 ASN288 PHE289 GLY290

Ligands
Unit 7 FMN321
Unit 8 FMN321
Unit 9 FMN321
Unit 10 FMN321

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany