3RFS - Sequence, Chains, Asymmetric and Biological Units

• Title: DESIGN OF A BINDING SCAFFOLD BASED ON VARIABLE LYMPHOCYTE RE JAWLESS VERTEBRATES BY MODULE ENGINEERING
• Keywords: LRR, PROTEIN BINDING, PLASMA
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3RFS	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	INTERNALIN B, REPEAT MODULES, VARIABLE LYMPHOCYTE B	A	263	2060	0
2	Protein	INTERNALIN B, REPEAT MODULES, VARIABLE LYMPHOCYTE B	B	263	2060	0
3	Ligand	INTERNALIN B, REPEAT MODULES, VARIABLE LYMPHOCYTE B	A	1	0	1
4	Ligand	INTERNALIN B, REPEAT MODULES, VARIABLE LYMPHOCYTE B	B	1	0	1
5	Water			218	0	218
total				746	4120	220

Proteins

Unit 1

THR 2 ILE 3 THR 4 VAL 5 SER 6 THR 7 PRO 8 ILE 9 LYS 10 GLN 11 ILE 12 PHE 13 PRO 14 ASP 15 ASP 16 ALA 17 PHE 18 ALA 19 GLU 20 THR 21 ILE 22 LYS 23 ALA 24 ASN 25 LEU 26 LYS 27 LYS 28 LYS 29 SER 30 VAL 31 THR 32 ASP 33 ALA 34 VAL 35 THR 36 GLN 37 ASN 38 GLU 39 LEU 40 ASN 41 SER 42 ILE 43 ASP 44 GLN 45 ILE 46 ILE 47 ALA 48 ASN 49 ASN 50 SER 51 ASP 52 ILE 53 LYS 54 SER 55 VAL 56 GLN 57 GLY 58 ILE 59 GLN 60 TYR 61 LEU 62 PRO 63 ASN 64 VAL 65 ARG 66 TYR 67 LEU 68 ALA 69 LEU 70 GLY 71 GLY 72 ASN 73 LYS 74 LEU 75 HIS 76 ASP 77 ILE 78 SER 79 ALA 80 LEU 81 LYS 82 GLU 83 LEU 84 THR 85 ASN 86 LEU 87 THR 88 TYR 89 LEU 90 ILE 91 LEU 92 THR 93 GLY 94 ASN 95 GLN 96 LEU 97 GLN 98 SER 99 LEU 100 PRO 101 ASN 102 GLY 103 VAL 104 PHE 105 ASP 106 LYS 107 LEU 108 THR 109 ASN 110 LEU 111 LYS 112 GLU 113 LEU 114 VAL 115 LEU 116 VAL 117 GLU 118 ASN 119 GLN 120 LEU 121 GLN 122 SER 123 LEU 124 PRO 125 ASP 126 GLY 127 VAL 128 PHE 129 ASP 130 LYS 131 LEU 132 THR 133 ASN 134 LEU 135 THR 136 TYR 137 LEU 138 ASN 139 LEU 140 ALA 141 HIS 142 ASN 143 GLN 144 LEU 145 GLN 146 SER 147 LEU 148 PRO 149 LYS 150 GLY 151 VAL 152 PHE 153 ASP 154 LYS 155 LEU 156 THR 157 ASN 158 LEU 159 THR 160 GLU 161 LEU 162 ASP 163 LEU 164 SER 165 TYR 166 ASN 167 GLN 168 LEU 169 GLN 170 SER 171 LEU 172 PRO 173 GLU 174 GLY 175 VAL 176 PHE 177 ASP 178 LYS 179 LEU 180 THR 181 GLN 182 LEU 183 LYS 184 ASP 185 LEU 186 ARG 187 LEU 188 TYR 189 GLN 190 ASN 191 GLN 192 LEU 193 LYS 194 SER 195 VAL 196 PRO 197 ASP 198 GLY 199 VAL 200 PHE 201 ASP 202 ARG 203 LEU 204 THR 205 SER 206 LEU 207 GLN 208 TYR 209 ILE 210 TRP 211 LEU 212 HIS 213 ASP 214 ASN 215 PRO 216 TRP 217 ASP 218 CYS 219 THR 220 CYS 221 PRO 222 GLY 223 ILE 224 ARG 225 TYR 226 LEU 227 SER 228 GLU 229 TRP 230 ILE 231 ASN 232 LYS 233 HIS 234 SER 235 GLY 236 VAL 237 VAL 238 ARG 239 ASN 240 SER 241 ALA 242 GLY 243 SER 244 VAL 245 ALA 246 PRO 247 ASP 248 SER 249 ALA 250 LYS 251 CYS 252 SER 253 GLY 254 SER 255 GLY 256 LYS 257 PRO 258 VAL 259 ARG 260 SER 261 ILE 262 ILE 263 CYS 264

Unit 2

THR 2 ILE 3 THR 4 VAL 5 SER 6 THR 7 PRO 8 ILE 9 LYS 10 GLN 11 ILE 12 PHE 13 PRO 14 ASP 15 ASP 16 ALA 17 PHE 18 ALA 19 GLU 20 THR 21 ILE 22 LYS 23 ALA 24 ASN 25 LEU 26 LYS 27 LYS 28 LYS 29 SER 30 VAL 31 THR 32 ASP 33 ALA 34 VAL 35 THR 36 GLN 37 ASN 38 GLU 39 LEU 40 ASN 41 SER 42 ILE 43 ASP 44 GLN 45 ILE 46 ILE 47 ALA 48 ASN 49 ASN 50 SER 51 ASP 52 ILE 53 LYS 54 SER 55 VAL 56 GLN 57 GLY 58 ILE 59 GLN 60 TYR 61 LEU 62 PRO 63 ASN 64 VAL 65 ARG 66 TYR 67 LEU 68 ALA 69 LEU 70 GLY 71 GLY 72 ASN 73 LYS 74 LEU 75 HIS 76 ASP 77 ILE 78 SER 79 ALA 80 LEU 81 LYS 82 GLU 83 LEU 84 THR 85 ASN 86 LEU 87 THR 88 TYR 89 LEU 90 ILE 91 LEU 92 THR 93 GLY 94 ASN 95 GLN 96 LEU 97 GLN 98 SER 99 LEU 100 PRO 101 ASN 102 GLY 103 VAL 104 PHE 105 ASP 106 LYS 107 LEU 108 THR 109 ASN 110 LEU 111 LYS 112 GLU 113 LEU 114 VAL 115 LEU 116 VAL 117 GLU 118 ASN 119 GLN 120 LEU 121 GLN 122 SER 123 LEU 124 PRO 125 ASP 126 GLY 127 VAL 128 PHE 129 ASP 130 LYS 131 LEU 132 THR 133 ASN 134 LEU 135 THR 136 TYR 137 LEU 138 ASN 139 LEU 140 ALA 141 HIS 142 ASN 143 GLN 144 LEU 145 GLN 146 SER 147 LEU 148 PRO 149 LYS 150 GLY 151 VAL 152 PHE 153 ASP 154 LYS 155 LEU 156 THR 157 ASN 158 LEU 159 THR 160 GLU 161 LEU 162 ASP 163 LEU 164 SER 165 TYR 166 ASN 167 GLN 168 LEU 169 GLN 170 SER 171 LEU 172 PRO 173 GLU 174 GLY 175 VAL 176 PHE 177 ASP 178 LYS 179 LEU 180 THR 181 GLN 182 LEU 183 LYS 184 ASP 185 LEU 186 ARG 187 LEU 188 TYR 189 GLN 190 ASN 191 GLN 192 LEU 193 LYS 194 SER 195 VAL 196 PRO 197 ASP 198 GLY 199 VAL 200 PHE 201 ASP 202 ARG 203 LEU 204 THR 205 SER 206 LEU 207 GLN 208 TYR 209 ILE 210 TRP 211 LEU 212 HIS 213 ASP 214 ASN 215 PRO 216 TRP 217 ASP 218 CYS 219 THR 220 CYS 221 PRO 222 GLY 223 ILE 224 ARG 225 TYR 226 LEU 227 SER 228 GLU 229 TRP 230 ILE 231 ASN 232 LYS 233 HIS 234 SER 235 GLY 236 VAL 237 VAL 238 ARG 239 ASN 240 SER 241 ALA 242 GLY 243 SER 244 VAL 245 ALA 246 PRO 247 ASP 248 SER 249 ALA 250 LYS 251 CYS 252 SER 253 GLY 254 SER 255 GLY 256 LYS 257 PRO 258 VAL 259 ARG 260 SER 261 ILE 262 ILE 263 CYS 264

Ligands

Unit 3	MG 302
Unit 4	MG 301