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Title | DESIGN OF A BINDING SCAFFOLD BASED ON VARIABLE LYMPHOCYTE RE JAWLESS VERTEBRATES BY MODULE ENGINEERING | |
Keywords | LRR, PROTEIN BINDING, PLASMA | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3RFS | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | INTERNALIN B, REPEAT MODULES, VARIABLE LYMPHOCYTE B | A | 263 | 2060 | 0 |
2 | Protein | INTERNALIN B, REPEAT MODULES, VARIABLE LYMPHOCYTE B | B | 263 | 2060 | 0 |
3 | Ligand | INTERNALIN B, REPEAT MODULES, VARIABLE LYMPHOCYTE B | A | 1 | 0 | 1 |
4 | Ligand | INTERNALIN B, REPEAT MODULES, VARIABLE LYMPHOCYTE B | B | 1 | 0 | 1 |
5 | Water | 218 | 0 | 218 | ||
total | 746 | 4120 | 220 |
Unit 1 | THR2 ILE3 THR4 VAL5 SER6 THR7 PRO8 ILE9 LYS10 GLN11 ILE12 PHE13 PRO14 ASP15 ASP16 ALA17 PHE18 ALA19 GLU20 THR21 ILE22 LYS23 ALA24 ASN25 LEU26 LYS27 LYS28 LYS29 SER30 VAL31 THR32 ASP33 ALA34 VAL35 THR36 GLN37 ASN38 GLU39 LEU40 ASN41 SER42 ILE43 ASP44 GLN45 ILE46 ILE47 ALA48 ASN49 ASN50 SER51 ASP52 ILE53 LYS54 SER55 VAL56 GLN57 GLY58 ILE59 GLN60 TYR61 LEU62 PRO63 ASN64 VAL65 ARG66 TYR67 LEU68 ALA69 LEU70 GLY71 GLY72 ASN73 LYS74 LEU75 HIS76 ASP77 ILE78 SER79 ALA80 LEU81 LYS82 GLU83 LEU84 THR85 ASN86 LEU87 THR88 TYR89 LEU90 ILE91 LEU92 THR93 GLY94 ASN95 GLN96 LEU97 GLN98 SER99 LEU100 PRO101 ASN102 GLY103 VAL104 PHE105 ASP106 LYS107 LEU108 THR109 ASN110 LEU111 LYS112 GLU113 LEU114 VAL115 LEU116 VAL117 GLU118 ASN119 GLN120 LEU121 GLN122 SER123 LEU124 PRO125 ASP126 GLY127 VAL128 PHE129 ASP130 LYS131 LEU132 THR133 ASN134 LEU135 THR136 TYR137 LEU138 ASN139 LEU140 ALA141 HIS142 ASN143 GLN144 LEU145 GLN146 SER147 LEU148 PRO149 LYS150 GLY151 VAL152 PHE153 ASP154 LYS155 LEU156 THR157 ASN158 LEU159 THR160 GLU161 LEU162 ASP163 LEU164 SER165 TYR166 ASN167 GLN168 LEU169 GLN170 SER171 LEU172 PRO173 GLU174 GLY175 VAL176 PHE177 ASP178 LYS179 LEU180 THR181 GLN182 LEU183 LYS184 ASP185 LEU186 ARG187 LEU188 TYR189 GLN190 ASN191 GLN192 LEU193 LYS194 SER195 VAL196 PRO197 ASP198 GLY199 VAL200 PHE201 ASP202 ARG203 LEU204 THR205 SER206 LEU207 GLN208 TYR209 ILE210 TRP211 LEU212 HIS213 ASP214 ASN215 PRO216 TRP217 ASP218 CYS219 THR220 CYS221 PRO222 GLY223 ILE224 ARG225 TYR226 LEU227 SER228 GLU229 TRP230 ILE231 ASN232 LYS233 HIS234 SER235 GLY236 VAL237 VAL238 ARG239 ASN240 SER241 ALA242 GLY243 SER244 VAL245 ALA246 PRO247 ASP248 SER249 ALA250 LYS251 CYS252 SER253 GLY254 SER255 GLY256 LYS257 PRO258 VAL259 ARG260 SER261 ILE262 ILE263 CYS264 |
Unit 2 | THR2 ILE3 THR4 VAL5 SER6 THR7 PRO8 ILE9 LYS10 GLN11 ILE12 PHE13 PRO14 ASP15 ASP16 ALA17 PHE18 ALA19 GLU20 THR21 ILE22 LYS23 ALA24 ASN25 LEU26 LYS27 LYS28 LYS29 SER30 VAL31 THR32 ASP33 ALA34 VAL35 THR36 GLN37 ASN38 GLU39 LEU40 ASN41 SER42 ILE43 ASP44 GLN45 ILE46 ILE47 ALA48 ASN49 ASN50 SER51 ASP52 ILE53 LYS54 SER55 VAL56 GLN57 GLY58 ILE59 GLN60 TYR61 LEU62 PRO63 ASN64 VAL65 ARG66 TYR67 LEU68 ALA69 LEU70 GLY71 GLY72 ASN73 LYS74 LEU75 HIS76 ASP77 ILE78 SER79 ALA80 LEU81 LYS82 GLU83 LEU84 THR85 ASN86 LEU87 THR88 TYR89 LEU90 ILE91 LEU92 THR93 GLY94 ASN95 GLN96 LEU97 GLN98 SER99 LEU100 PRO101 ASN102 GLY103 VAL104 PHE105 ASP106 LYS107 LEU108 THR109 ASN110 LEU111 LYS112 GLU113 LEU114 VAL115 LEU116 VAL117 GLU118 ASN119 GLN120 LEU121 GLN122 SER123 LEU124 PRO125 ASP126 GLY127 VAL128 PHE129 ASP130 LYS131 LEU132 THR133 ASN134 LEU135 THR136 TYR137 LEU138 ASN139 LEU140 ALA141 HIS142 ASN143 GLN144 LEU145 GLN146 SER147 LEU148 PRO149 LYS150 GLY151 VAL152 PHE153 ASP154 LYS155 LEU156 THR157 ASN158 LEU159 THR160 GLU161 LEU162 ASP163 LEU164 SER165 TYR166 ASN167 GLN168 LEU169 GLN170 SER171 LEU172 PRO173 GLU174 GLY175 VAL176 PHE177 ASP178 LYS179 LEU180 THR181 GLN182 LEU183 LYS184 ASP185 LEU186 ARG187 LEU188 TYR189 GLN190 ASN191 GLN192 LEU193 LYS194 SER195 VAL196 PRO197 ASP198 GLY199 VAL200 PHE201 ASP202 ARG203 LEU204 THR205 SER206 LEU207 GLN208 TYR209 ILE210 TRP211 LEU212 HIS213 ASP214 ASN215 PRO216 TRP217 ASP218 CYS219 THR220 CYS221 PRO222 GLY223 ILE224 ARG225 TYR226 LEU227 SER228 GLU229 TRP230 ILE231 ASN232 LYS233 HIS234 SER235 GLY236 VAL237 VAL238 ARG239 ASN240 SER241 ALA242 GLY243 SER244 VAL245 ALA246 PRO247 ASP248 SER249 ALA250 LYS251 CYS252 SER253 GLY254 SER255 GLY256 LYS257 PRO258 VAL259 ARG260 SER261 ILE262 ILE263 CYS264 |
Unit 3 | MG302 |
Unit 4 | MG301 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |