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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A PUTATIVE ICLR TRANSCRIPTIONAL REGULAT (TM1040_3717) FROM SILICIBACTER SP. TM1040 AT 2.46 A RESOLU
Keywords DNA/RNA-BINDING 3-HELICAL BUNDLE, PROFILIN-LIKE, STRUCTURAL JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTU INITIATIVE, PSI-BIOLOGY, DNA BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3R4K     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSCRIPTIONAL REGULATOR, ICLR FAMILY  A 255 1849 48
2  Protein   TRANSCRIPTIONAL REGULATOR, ICLR FAMILY  B 254 1840 40
3  Protein   TRANSCRIPTIONAL REGULATOR, ICLR FAMILY  C 255 1845 45
4  Protein   TRANSCRIPTIONAL REGULATOR, ICLR FAMILY  D 253 1838 48
5  Ligand   TRANSCRIPTIONAL REGULATOR, ICLR FAMILY  B 2 0 8
6  Ligand   TRANSCRIPTIONAL REGULATOR, ICLR FAMILY  C 3 0 12
7 Water     289 0 289
total       1311 7372 490
Proteins
Unit 1 MSE1 GLY2 THR3 VAL4 SER5 LYS6 ALA7 LEU8 THR9 LEU10 LEU11 THR12 TYR13 PHE14 ASN15 HIS16 GLY17 ARG18 LEU19 GLU20 ILE21 GLY22 LEU23 SER24 ASP25 LEU26 THR27 ARG28 LEU29 SER30 GLY31 MSE32 ASN33 LYS34 ALA35 THR36 VAL37 TYR38 ARG39 LEU40 MSE41 SER42 GLU43 LEU44 GLN45 GLU46 ALA47 GLY48 PHE49 VAL50 GLU51 GLN52 VAL53 GLU54 GLY55 ALA56 ARG57 SER58 TYR59 ARG60 LEU61 GLY62 PRO63 GLN64 VAL65 LEU66 ARG67 LEU68 ALA69 ALA70 LEU71 ARG72 GLU73 ALA74 SER75 VAL76 PRO77 ILE78 LEU79 SER80 ALA81 SER82 ARG83 ARG84 VAL85 LEU86 ARG87 GLU88 LEU89 SER90 GLU91 ASP92 THR93 GLY94 GLU95 THR96 THR97 HIS98 LEU99 SER100 LEU101 LEU102 GLN103 GLY104 GLU105 GLN106 LEU107 ALA108 SER109 LEU110 SER111 HIS112 ALA113 TYR114 SER115 SER116 ARG117 ASN118 ALA119 THR120 LYS121 VAL122 MSE123 MSE124 GLU125 ASP126 ALA127 GLU128 VAL129 LEU130 THR131 PHE132 HIS133 GLY134 THR135 ALA136 SER137 GLY138 LEU139 ALA140 VAL141 LEU142 ALA143 TYR144 SER145 GLU146 PRO147 SER148 PHE149 VAL150 ASP151 ALA152 VAL153 LEU154 ALA155 ALA156 PRO157 LEU158 THR159 ALA160 ARG161 THR162 PRO163 GLN164 THR165 GLN166 THR167 ASP168 PRO169 ALA170 ALA171 ILE172 ARG173 ALA174 GLU175 ILE176 ALA177 GLU178 VAL179 ARG180 ARG181 THR182 GLY183 LEU184 ALA185 GLN186 SER187 ILE188 GLY189 GLY190 PHE191 GLU192 ALA193 GLU194 VAL195 HIS196 SER197 HIS198 ALA199 VAL200 PRO201 ILE202 PHE203 GLY204 PRO205 ASP206 ARG207 ALA208 VAL209 LEU210 GLY211 ALA212 LEU213 ALA214 VAL215 ALA216 ALA217 PRO218 THR219 SER220 ARG221 MSE222 THR223 PRO224 ASP225 GLN226 LYS227 ARG228 THR229 ILE230 PRO231 PRO232 ALA233 LEU234 ARG235 ALA236 ALA237 GLY238 LEU239 SER240 LEU241 THR242 GLU243 ARG244 ILE245 GLY246 GLY247 ALA248 CYS249 PRO250 PRO251 GLU252 PHE253 PRO254 THR255
Unit 2 GLY2 THR3 VAL4 SER5 LYS6 ALA7 LEU8 THR9 LEU10 LEU11 THR12 TYR13 PHE14 ASN15 HIS16 GLY17 ARG18 LEU19 GLU20 ILE21 GLY22 LEU23 SER24 ASP25 LEU26 THR27 ARG28 LEU29 SER30 GLY31 MSE32 ASN33 LYS34 ALA35 THR36 VAL37 TYR38 ARG39 LEU40 MSE41 SER42 GLU43 LEU44 GLN45 GLU46 ALA47 GLY48 PHE49 VAL50 GLU51 GLN52 VAL53 GLU54 GLY55 ALA56 ARG57 SER58 TYR59 ARG60 LEU61 GLY62 PRO63 GLN64 VAL65 LEU66 ARG67 LEU68 ALA69 ALA70 LEU71 ARG72 GLU73 ALA74 SER75 VAL76 PRO77 ILE78 LEU79 SER80 ALA81 SER82 ARG83 ARG84 VAL85 LEU86 ARG87 GLU88 LEU89 SER90 GLU91 ASP92 THR93 GLY94 GLU95 THR96 THR97 HIS98 LEU99 SER100 LEU101 LEU102 GLN103 GLY104 GLU105 GLN106 LEU107 ALA108 SER109 LEU110 SER111 HIS112 ALA113 TYR114 SER115 SER116 ARG117 ASN118 ALA119 THR120 LYS121 VAL122 MSE123 MSE124 GLU125 ASP126 ALA127 GLU128 VAL129 LEU130 THR131 PHE132 HIS133 GLY134 THR135 ALA136 SER137 GLY138 LEU139 ALA140 VAL141 LEU142 ALA143 TYR144 SER145 GLU146 PRO147 SER148 PHE149 VAL150 ASP151 ALA152 VAL153 LEU154 ALA155 ALA156 PRO157 LEU158 THR159 ALA160 ARG161 THR162 PRO163 GLN164 THR165 GLN166 THR167 ASP168 PRO169 ALA170 ALA171 ILE172 ARG173 ALA174 GLU175 ILE176 ALA177 GLU178 VAL179 ARG180 ARG181 THR182 GLY183 LEU184 ALA185 GLN186 SER187 ILE188 GLY189 GLY190 PHE191 GLU192 ALA193 GLU194 VAL195 HIS196 SER197 HIS198 ALA199 VAL200 PRO201 ILE202 PHE203 GLY204 PRO205 ASP206 ARG207 ALA208 VAL209 LEU210 GLY211 ALA212 LEU213 ALA214 VAL215 ALA216 ALA217 PRO218 THR219 SER220 ARG221 MSE222 THR223 PRO224 ASP225 GLN226 LYS227 ARG228 THR229 ILE230 PRO231 PRO232 ALA233 LEU234 ARG235 ALA236 ALA237 GLY238 LEU239 SER240 LEU241 THR242 GLU243 ARG244 ILE245 GLY246 GLY247 ALA248 CYS249 PRO250 PRO251 GLU252 PHE253 PRO254 THR255
Unit 3 MSE1 GLY2 THR3 VAL4 SER5 LYS6 ALA7 LEU8 THR9 LEU10 LEU11 THR12 TYR13 PHE14 ASN15 HIS16 GLY17 ARG18 LEU19 GLU20 ILE21 GLY22 LEU23 SER24 ASP25 LEU26 THR27 ARG28 LEU29 SER30 GLY31 MSE32 ASN33 LYS34 ALA35 THR36 VAL37 TYR38 ARG39 LEU40 MSE41 SER42 GLU43 LEU44 GLN45 GLU46 ALA47 GLY48 PHE49 VAL50 GLU51 GLN52 VAL53 GLU54 GLY55 ALA56 ARG57 SER58 TYR59 ARG60 LEU61 GLY62 PRO63 GLN64 VAL65 LEU66 ARG67 LEU68 ALA69 ALA70 LEU71 ARG72 GLU73 ALA74 SER75 VAL76 PRO77 ILE78 LEU79 SER80 ALA81 SER82 ARG83 ARG84 VAL85 LEU86 ARG87 GLU88 LEU89 SER90 GLU91 ASP92 THR93 GLY94 GLU95 THR96 THR97 HIS98 LEU99 SER100 LEU101 LEU102 GLN103 GLY104 GLU105 GLN106 LEU107 ALA108 SER109 LEU110 SER111 HIS112 ALA113 TYR114 SER115 SER116 ARG117 ASN118 ALA119 THR120 LYS121 VAL122 MSE123 MSE124 GLU125 ASP126 ALA127 GLU128 VAL129 LEU130 THR131 PHE132 HIS133 GLY134 THR135 ALA136 SER137 GLY138 LEU139 ALA140 VAL141 LEU142 ALA143 TYR144 SER145 GLU146 PRO147 SER148 PHE149 VAL150 ASP151 ALA152 VAL153 LEU154 ALA155 ALA156 PRO157 LEU158 THR159 ALA160 ARG161 THR162 PRO163 GLN164 THR165 GLN166 THR167 ASP168 PRO169 ALA170 ALA171 ILE172 ARG173 ALA174 GLU175 ILE176 ALA177 GLU178 VAL179 ARG180 ARG181 THR182 GLY183 LEU184 ALA185 GLN186 SER187 ILE188 GLY189 GLY190 PHE191 GLU192 ALA193 GLU194 VAL195 HIS196 SER197 HIS198 ALA199 VAL200 PRO201 ILE202 PHE203 GLY204 PRO205 ASP206 ARG207 ALA208 VAL209 LEU210 GLY211 ALA212 LEU213 ALA214 VAL215 ALA216 ALA217 PRO218 THR219 SER220 ARG221 MSE222 THR223 PRO224 ASP225 GLN226 LYS227 ARG228 THR229 ILE230 PRO231 PRO232 ALA233 LEU234 ARG235 ALA236 ALA237 GLY238 LEU239 SER240 LEU241 THR242 GLU243 ARG244 ILE245 GLY246 GLY247 ALA248 CYS249 PRO250 PRO251 GLU252 PHE253 PRO254 THR255
Unit 4 MSE1 GLY2 THR3 VAL4 SER5 LYS6 ALA7 LEU8 THR9 LEU10 LEU11 THR12 TYR13 PHE14 ASN15 HIS16 GLY17 ARG18 LEU19 GLU20 ILE21 GLY22 LEU23 SER24 ASP25 LEU26 THR27 ARG28 LEU29 SER30 GLY31 MSE32 ASN33 LYS34 ALA35 THR36 VAL37 TYR38 ARG39 LEU40 MSE41 SER42 GLU43 LEU44 GLN45 GLU46 ALA47 GLY48 PHE49 VAL50 GLU51 GLN52 VAL53 GLU54 ARG57 SER58 TYR59 ARG60 LEU61 GLY62 PRO63 GLN64 VAL65 LEU66 ARG67 LEU68 ALA69 ALA70 LEU71 ARG72 GLU73 ALA74 SER75 VAL76 PRO77 ILE78 LEU79 SER80 ALA81 SER82 ARG83 ARG84 VAL85 LEU86 ARG87 GLU88 LEU89 SER90 GLU91 ASP92 THR93 GLY94 GLU95 THR96 THR97 HIS98 LEU99 SER100 LEU101 LEU102 GLN103 GLY104 GLU105 GLN106 LEU107 ALA108 SER109 LEU110 SER111 HIS112 ALA113 TYR114 SER115 SER116 ARG117 ASN118 ALA119 THR120 LYS121 VAL122 MSE123 MSE124 GLU125 ASP126 ALA127 GLU128 VAL129 LEU130 THR131 PHE132 HIS133 GLY134 THR135 ALA136 SER137 GLY138 LEU139 ALA140 VAL141 LEU142 ALA143 TYR144 SER145 GLU146 PRO147 SER148 PHE149 VAL150 ASP151 ALA152 VAL153 LEU154 ALA155 ALA156 PRO157 LEU158 THR159 ALA160 ARG161 THR162 PRO163 GLN164 THR165 GLN166 THR167 ASP168 PRO169 ALA170 ALA171 ILE172 ARG173 ALA174 GLU175 ILE176 ALA177 GLU178 VAL179 ARG180 ARG181 THR182 GLY183 LEU184 ALA185 GLN186 SER187 ILE188 GLY189 GLY190 PHE191 GLU192 ALA193 GLU194 VAL195 HIS196 SER197 HIS198 ALA199 VAL200 PRO201 ILE202 PHE203 GLY204 PRO205 ASP206 ARG207 ALA208 VAL209 LEU210 GLY211 ALA212 LEU213 ALA214 VAL215 ALA216 ALA217 PRO218 THR219 SER220 ARG221 MSE222 THR223 PRO224 ASP225 GLN226 LYS227 ARG228 THR229 ILE230 PRO231 PRO232 ALA233 LEU234 ARG235 ALA236 ALA237 GLY238 LEU239 SER240 LEU241 THR242 GLU243 ARG244 ILE245 GLY246 GLY247 ALA248 CYS249 PRO250 PRO251 GLU252 PHE253 PRO254 THR255
Ligands
Unit 5 EDO301 EDO303
Unit 6 EDO300 EDO302 EDO304
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany