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Sequence, Chains, Asymmetric and Biological Units

Title		`CRYSTAL STRUCTURE OF GCGGCGGC DUPLEX`
Keywords		`CGG REPEATS, FRAGILE X MENTAL RETARDATION, RNA`
Experiment		`X-ray diffraction`
Number of Models		`1`


Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit

PDB	3R1C	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB
Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	RNA		A	8	172	0
2	RNA		B	8	172	0
3	RNA		C	8	172	0
4	RNA		D	8	172	0
5	RNA		E	8	172	0
6	RNA		F	8	172	0
7	RNA		G	8	172	0
8	RNA		H	8	172	0
9	RNA		I	8	172	0
10	RNA		J	8	172	0
11	RNA		K	8	172	0
12	RNA		L	8	172	0
13	RNA		M	8	172	0
14	RNA		N	8	172	0
15	RNA		O	8	172	0
16	RNA		P	8	172	0
17	RNA		Q	8	172	0
18	RNA		R	8	172	0
19	RNA		S	8	172	0
20	RNA		Y	8	172	0
21	RNA		T	8	172	0
22	RNA		U	8	172	0
23	RNA		W	8	172	0
24	RNA		X	8	172	0
25	RNA		V	8	172	0
26	RNA		Z	8	172	0
27	RNA		a	8	172	0
28	RNA		b	8	172	0
29	RNA		c	8	172	0
30	RNA		d	8	172	0
31	RNA		e	8	172	0
32	RNA		f	8	172	0
33	RNA		g	8	172	0
34	RNA		h	8	172	0
35	RNA		i	8	172	0
36	RNA		j	8	172	0
37	Ligand		S	1	0	5
38	Ligand	`RNA (5'-R(GPCPGPGPCPGPGPC)-3')`	W	1	0	5
39	Ligand	`RNA (5'-R(GPCPGPGPCPGPGPC)-3')`	X	1	0	5
40	Ligand	`RNA (5'-R(GPCPGPGPCPGPGPC)-3')`	b	1	0	5
41	Ligand	`RNA (5'-R(GPCPGPGPCPGPGPC)-3')`	c	1	0	5
42	Ligand	`RNA (5'-R(GPCPGPGPCPGPGPC)-3')`	d	1	0	5
43	Ligand	`RNA (5'-R(GPCPGPGPCPGPGPC)-3')`	e	1	0	5
44	Water			524	0	524
total				819	6192	559

Nucleic acids

Unit 1	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 2	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 3	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 4	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 5	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 6	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 7	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 8	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 9	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 10	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 11	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 12	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 13	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 14	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 15	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 16	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 17	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 18	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 19	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 20	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 21	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 22	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 23	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 24	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 25	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 26	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 27	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 28	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 29	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 30	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 31	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 32	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 33	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 34	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 35	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈
Unit 36	G₁ C₂ G₃ G₄ C₅ G₆ G₇ C₈

Ligands

Unit 37	SO4₉
Unit 38	SO4₉
Unit 39	SO4₉
Unit 40	SO4₉
Unit 41	SO4₉
Unit 42	SO4₉
Unit 43	SO4₉

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:	PDBscan.pl (15 Sep 2016)
Author:	Peter Slickers (`slickers@leibniz-fli.de`), IMB Jena, Germany