3QY9 - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE REDUCTASE FROM STAPHYLOCOCCUS AUREUS
• Keywords: ROSSMANN FOLD, REDUCTASE, NADH, NADPH, DIHYDRODIPICOLINATE, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3QY9	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DIHYDRODIPICOLINATE REDUCTASE	A	239	1839	0
2	Protein	DIHYDRODIPICOLINATE REDUCTASE	B	241	1886	0
3	Protein	DIHYDRODIPICOLINATE REDUCTASE	C	241	1884	0
4	Protein	DIHYDRODIPICOLINATE REDUCTASE	D	241	1886	0
5	Ligand	DIHYDRODIPICOLINATE REDUCTASE	A	5	0	26
6	Ligand	DIHYDRODIPICOLINATE REDUCTASE	B	7	0	34
7	Ligand	DIHYDRODIPICOLINATE REDUCTASE	C	1	0	5
8	Ligand	DIHYDRODIPICOLINATE REDUCTASE	B	1	0	6
9	Ligand	DIHYDRODIPICOLINATE REDUCTASE	C	5	0	25
10	Ligand	DIHYDRODIPICOLINATE REDUCTASE	D	7	0	34
11	Water			711	0	711
total				1699	7495	841

Proteins

Unit 1	SER 0 MET 1 LYS 2 ILE 3 LEU 4 LEU 5 ILE 6 GLY 7 TYR 8 GLY 9 ALA 10 MET 11 ASN 12 GLN 13 ARG 14 VAL 15 ALA 16 ARG 17 LEU 18 ALA 19 GLU 20 GLU 21 LYS 22 GLY 23 HIS 24 GLU 25 ILE 26 VAL 27 GLY 28 VAL 29 ILE 30 GLU 31 ASN 32 THR 33 PRO 34 LYS 35 THR 38 PRO 39 TYR 40 GLN 41 GLN 42 TYR 43 GLN 44 HIS 45 ILE 46 ALA 47 ASP 48 VAL 49 LYS 50 GLY 51 ALA 52 ASP 53 VAL 54 ALA 55 ILE 56 ASP 57 PHE 58 SER 59 ASN 60 PRO 61 ASN 62 LEU 63 LEU 64 PHE 65 PRO 66 LEU 67 LEU 68 ASP 69 GLU 70 ASP 71 PHE 72 HIS 73 LEU 74 PRO 75 LEU 76 VAL 77 VAL 78 ALA 79 THR 80 THR 81 GLY 82 GLU 83 LYS 84 GLU 85 LYS 86 LEU 87 LEU 88 ASN 89 LYS 90 LEU 91 ASP 92 GLU 93 LEU 94 SER 95 GLN 96 ASN 97 MET 98 PRO 99 VAL 100 PHE 101 PHE 102 SER 103 ALA 104 ASN 105 MET 106 SER 107 TYR 108 GLY 109 VAL 110 HIS 111 ALA 112 LEU 113 THR 114 LYS 115 ILE 116 LEU 117 ALA 118 ALA 119 ALA 120 VAL 121 PRO 122 LEU 123 LEU 124 ASP 125 ASP 126 PHE 127 ASP 128 ILE 129 GLU 130 LEU 131 THR 132 GLU 133 ALA 134 HIS 135 HIS 136 ASN 137 LYS 138 LYS 139 VAL 140 ASP 141 ALA 142 PRO 143 SER 144 GLY 145 THR 146 LEU 147 GLU 148 LYS 149 LEU 150 TYR 151 ASP 152 VAL 153 ILE 154 VAL 155 SER 156 LEU 157 LYS 158 GLU 159 ASN 160 VAL 161 THR 162 PRO 163 VAL 164 TYR 165 ASP 166 ARG 167 HIS 168 GLU 169 LEU 170 ASN 171 GLU 172 LYS 173 ARG 174 GLN 175 PRO 176 GLN 177 ASP 178 ILE 179 GLY 180 ILE 181 HIS 182 SER 183 ILE 184 ARG 185 GLY 186 GLY 187 THR 188 ILE 189 VAL 190 GLY 191 GLU 192 HIS 193 GLU 194 VAL 195 LEU 196 PHE 197 ALA 198 GLY 199 THR 200 ASP 201 GLU 202 THR 203 ILE 204 GLN 205 ILE 206 THR 207 HIS 208 ARG 209 ALA 210 GLN 211 SER 212 LYS 213 ASP 214 ILE 215 PHE 216 ALA 217 ASN 218 GLY 219 ALA 220 ILE 221 GLN 222 ALA 223 ALA 224 GLU 225 ARG 226 LEU 227 VAL 228 ASN 229 LYS 230 PRO 231 ASN 232 GLY 233 PHE 234 TYR 235 THR 236 PHE 237 ASP 238 ASN 239 LEU 240
Unit 2	SER 0 MET 1 LYS 2 ILE 3 LEU 4 LEU 5 ILE 6 GLY 7 TYR 8 GLY 9 ALA 10 MET 11 ASN 12 GLN 13 ARG 14 VAL 15 ALA 16 ARG 17 LEU 18 ALA 19 GLU 20 GLU 21 LYS 22 GLY 23 HIS 24 GLU 25 ILE 26 VAL 27 GLY 28 VAL 29 ILE 30 GLU 31 ASN 32 THR 33 PRO 34 LYS 35 ALA 36 THR 37 THR 38 PRO 39 TYR 40 GLN 41 GLN 42 TYR 43 GLN 44 HIS 45 ILE 46 ALA 47 ASP 48 VAL 49 LYS 50 GLY 51 ALA 52 ASP 53 VAL 54 ALA 55 ILE 56 ASP 57 PHE 58 SER 59 ASN 60 PRO 61 ASN 62 LEU 63 LEU 64 PHE 65 PRO 66 LEU 67 LEU 68 ASP 69 GLU 70 ASP 71 PHE 72 HIS 73 LEU 74 PRO 75 LEU 76 VAL 77 VAL 78 ALA 79 THR 80 THR 81 GLY 82 GLU 83 LYS 84 GLU 85 LYS 86 LEU 87 LEU 88 ASN 89 LYS 90 LEU 91 ASP 92 GLU 93 LEU 94 SER 95 GLN 96 ASN 97 MET 98 PRO 99 VAL 100 PHE 101 PHE 102 SER 103 ALA 104 ASN 105 MET 106 SER 107 TYR 108 GLY 109 VAL 110 HIS 111 ALA 112 LEU 113 THR 114 LYS 115 ILE 116 LEU 117 ALA 118 ALA 119 ALA 120 VAL 121 PRO 122 LEU 123 LEU 124 ASP 125 ASP 126 PHE 127 ASP 128 ILE 129 GLU 130 LEU 131 THR 132 GLU 133 ALA 134 HIS 135 HIS 136 ASN 137 LYS 138 LYS 139 VAL 140 ASP 141 ALA 142 PRO 143 SER 144 GLY 145 THR 146 LEU 147 GLU 148 LYS 149 LEU 150 TYR 151 ASP 152 VAL 153 ILE 154 VAL 155 SER 156 LEU 157 LYS 158 GLU 159 ASN 160 VAL 161 THR 162 PRO 163 VAL 164 TYR 165 ASP 166 ARG 167 HIS 168 GLU 169 LEU 170 ASN 171 GLU 172 LYS 173 ARG 174 GLN 175 PRO 176 GLN 177 ASP 178 ILE 179 GLY 180 ILE 181 HIS 182 SER 183 ILE 184 ARG 185 GLY 186 GLY 187 THR 188 ILE 189 VAL 190 GLY 191 GLU 192 HIS 193 GLU 194 VAL 195 LEU 196 PHE 197 ALA 198 GLY 199 THR 200 ASP 201 GLU 202 THR 203 ILE 204 GLN 205 ILE 206 THR 207 HIS 208 ARG 209 ALA 210 GLN 211 SER 212 LYS 213 ASP 214 ILE 215 PHE 216 ALA 217 ASN 218 GLY 219 ALA 220 ILE 221 GLN 222 ALA 223 ALA 224 GLU 225 ARG 226 LEU 227 VAL 228 ASN 229 LYS 230 PRO 231 ASN 232 GLY 233 PHE 234 TYR 235 THR 236 PHE 237 ASP 238 ASN 239 LEU 240
Unit 3	SER 0 MET 1 LYS 2 ILE 3 LEU 4 LEU 5 ILE 6 GLY 7 TYR 8 GLY 9 ALA 10 MET 11 ASN 12 GLN 13 ARG 14 VAL 15 ALA 16 ARG 17 LEU 18 ALA 19 GLU 20 GLU 21 LYS 22 GLY 23 HIS 24 GLU 25 ILE 26 VAL 27 GLY 28 VAL 29 ILE 30 GLU 31 ASN 32 THR 33 PRO 34 LYS 35 ALA 36 THR 37 THR 38 PRO 39 TYR 40 GLN 41 GLN 42 TYR 43 GLN 44 HIS 45 ILE 46 ALA 47 ASP 48 VAL 49 LYS 50 GLY 51 ALA 52 ASP 53 VAL 54 ALA 55 ILE 56 ASP 57 PHE 58 SER 59 ASN 60 PRO 61 ASN 62 LEU 63 LEU 64 PHE 65 PRO 66 LEU 67 LEU 68 ASP 69 GLU 70 ASP 71 PHE 72 HIS 73 LEU 74 PRO 75 LEU 76 VAL 77 VAL 78 ALA 79 THR 80 THR 81 GLY 82 GLU 83 LYS 84 GLU 85 LYS 86 LEU 87 LEU 88 ASN 89 LYS 90 LEU 91 ASP 92 GLU 93 LEU 94 SER 95 GLN 96 ASN 97 MET 98 PRO 99 VAL 100 PHE 101 PHE 102 SER 103 ALA 104 ASN 105 MET 106 SER 107 TYR 108 GLY 109 VAL 110 HIS 111 ALA 112 LEU 113 THR 114 LYS 115 ILE 116 LEU 117 ALA 118 ALA 119 ALA 120 VAL 121 PRO 122 LEU 123 LEU 124 ASP 125 ASP 126 PHE 127 ASP 128 ILE 129 GLU 130 LEU 131 THR 132 GLU 133 ALA 134 HIS 135 HIS 136 ASN 137 LYS 138 LYS 139 VAL 140 ASP 141 ALA 142 PRO 143 SER 144 GLY 145 THR 146 LEU 147 GLU 148 LYS 149 LEU 150 TYR 151 ASP 152 VAL 153 ILE 154 VAL 155 SER 156 LEU 157 LYS 158 GLU 159 ASN 160 VAL 161 THR 162 PRO 163 VAL 164 TYR 165 ASP 166 ARG 167 HIS 168 GLU 169 LEU 170 ASN 171 GLU 172 LYS 173 ARG 174 GLN 175 PRO 176 GLN 177 ASP 178 ILE 179 GLY 180 ILE 181 HIS 182 SER 183 ILE 184 ARG 185 GLY 186 GLY 187 THR 188 ILE 189 VAL 190 GLY 191 GLU 192 HIS 193 GLU 194 VAL 195 LEU 196 PHE 197 ALA 198 GLY 199 THR 200 ASP 201 GLU 202 THR 203 ILE 204 GLN 205 ILE 206 THR 207 HIS 208 ARG 209 ALA 210 GLN 211 SER 212 LYS 213 ASP 214 ILE 215 PHE 216 ALA 217 ASN 218 GLY 219 ALA 220 ILE 221 GLN 222 ALA 223 ALA 224 GLU 225 ARG 226 LEU 227 VAL 228 ASN 229 LYS 230 PRO 231 ASN 232 GLY 233 PHE 234 TYR 235 THR 236 PHE 237 ASP 238 ASN 239 LEU 240
Unit 4	SER 0 MET 1 LYS 2 ILE 3 LEU 4 LEU 5 ILE 6 GLY 7 TYR 8 GLY 9 ALA 10 MET 11 ASN 12 GLN 13 ARG 14 VAL 15 ALA 16 ARG 17 LEU 18 ALA 19 GLU 20 GLU 21 LYS 22 GLY 23 HIS 24 GLU 25 ILE 26 VAL 27 GLY 28 VAL 29 ILE 30 GLU 31 ASN 32 THR 33 PRO 34 LYS 35 ALA 36 THR 37 THR 38 PRO 39 TYR 40 GLN 41 GLN 42 TYR 43 GLN 44 HIS 45 ILE 46 ALA 47 ASP 48 VAL 49 LYS 50 GLY 51 ALA 52 ASP 53 VAL 54 ALA 55 ILE 56 ASP 57 PHE 58 SER 59 ASN 60 PRO 61 ASN 62 LEU 63 LEU 64 PHE 65 PRO 66 LEU 67 LEU 68 ASP 69 GLU 70 ASP 71 PHE 72 HIS 73 LEU 74 PRO 75 LEU 76 VAL 77 VAL 78 ALA 79 THR 80 THR 81 GLY 82 GLU 83 LYS 84 GLU 85 LYS 86 LEU 87 LEU 88 ASN 89 LYS 90 LEU 91 ASP 92 GLU 93 LEU 94 SER 95 GLN 96 ASN 97 MET 98 PRO 99 VAL 100 PHE 101 PHE 102 SER 103 ALA 104 ASN 105 MET 106 SER 107 TYR 108 GLY 109 VAL 110 HIS 111 ALA 112 LEU 113 THR 114 LYS 115 ILE 116 LEU 117 ALA 118 ALA 119 ALA 120 VAL 121 PRO 122 LEU 123 LEU 124 ASP 125 ASP 126 PHE 127 ASP 128 ILE 129 GLU 130 LEU 131 THR 132 GLU 133 ALA 134 HIS 135 HIS 136 ASN 137 LYS 138 LYS 139 VAL 140 ASP 141 ALA 142 PRO 143 SER 144 GLY 145 THR 146 LEU 147 GLU 148 LYS 149 LEU 150 TYR 151 ASP 152 VAL 153 ILE 154 VAL 155 SER 156 LEU 157 LYS 158 GLU 159 ASN 160 VAL 161 THR 162 PRO 163 VAL 164 TYR 165 ASP 166 ARG 167 HIS 168 GLU 169 LEU 170 ASN 171 GLU 172 LYS 173 ARG 174 GLN 175 PRO 176 GLN 177 ASP 178 ILE 179 GLY 180 ILE 181 HIS 182 SER 183 ILE 184 ARG 185 GLY 186 GLY 187 THR 188 ILE 189 VAL 190 GLY 191 GLU 192 HIS 193 GLU 194 VAL 195 LEU 196 PHE 197 ALA 198 GLY 199 THR 200 ASP 201 GLU 202 THR 203 ILE 204 GLN 205 ILE 206 THR 207 HIS 208 ARG 209 ALA 210 GLN 211 SER 212 LYS 213 ASP 214 ILE 215 PHE 216 ALA 217 ASN 218 GLY 219 ALA 220 ILE 221 GLN 222 ALA 223 ALA 224 GLU 225 ARG 226 LEU 227 VAL 228 ASN 229 LYS 230 PRO 231 ASN 232 GLY 233 PHE 234 TYR 235 THR 236 PHE 237 ASP 238 ASN 239 LEU 240

Ligands

Unit 5	SO4 241 SO4 242 SO4 243 SO4 244 GOL 245
Unit 6	ACT 241 SO4 242 SO4 243 SO4 244 SO4 245 SO4 246 SO4 247
Unit 7	SO4 241
Unit 8	GOL 248
Unit 9	SO4 242 SO4 243 SO4 244 SO4 245 SO4 246
Unit 10	ACT 241 SO4 242 SO4 243 SO4 244 SO4 245 SO4 246 SO4 247