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Title | HUMAN SETD6 IN COMPLEX WITH RELA LYS310 | |
Keywords | EPIGENETICS, PROTEIN LYSINE METHYLTRANSFERASE, TRANSFERASE, NETWORK VIA METHYLLYSINE SIGNALING | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3QXY | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | N-LYSINE METHYLTRANSFERASE SETD6 | A | 420 | 3279 | 0 |
2 | Protein | TRANSCRIPTION FACTOR P65 | P | 1 | 9 | 0 |
3 | Protein | N-LYSINE METHYLTRANSFERASE SETD6 | B | 414 | 3245 | 0 |
4 | Protein | TRANSCRIPTION FACTOR P65 | Q | 1 | 9 | 0 |
5 | Ligand | N-LYSINE METHYLTRANSFERASE SETD6 | A | 12 | 0 | 71 |
6 | Ligand | N-LYSINE METHYLTRANSFERASE SETD6 | B | 7 | 0 | 51 |
7 | Water | 667 | 0 | 667 | ||
total | 1522 | 6542 | 789 |
Unit 1 | LEU19 ASP20 PRO21 VAL22 ALA23 CYS24 PHE25 LEU26 SER27 TRP28 CYS29 ARG30 ARG31 VAL32 GLY33 LEU34 GLU35 LEU36 SER37 PRO38 LYS39 VAL64 ALA65 VAL66 SER67 ARG68 GLN69 GLY70 THR71 VAL72 ALA73 GLY74 TYR75 GLY76 MET77 VAL78 ALA79 ARG80 GLU81 SER82 VAL83 GLN84 ALA85 GLY86 GLU87 LEU88 LEU89 PHE90 VAL91 VAL92 PRO93 ARG94 ALA95 ALA96 LEU97 LEU98 SER99 GLN100 HIS101 THR102 CYS103 SER104 ILE105 GLY106 GLY107 LEU108 LEU109 GLU110 ARG111 GLU112 ARG113 VAL114 ALA115 LEU116 GLN117 SER118 GLN119 SER120 GLY121 TRP122 VAL123 PRO124 LEU125 LEU126 LEU127 ALA128 LEU129 LEU130 HIS131 GLU132 LEU133 GLN134 ALA135 PRO136 ALA137 SER138 ARG139 TRP140 ARG141 PRO142 TYR143 PHE144 ALA145 LEU146 TRP147 PRO148 GLU149 LEU150 GLY151 ARG152 LEU153 GLU154 HIS155 PRO156 MET157 PHE158 TRP159 PRO160 GLU161 GLU162 GLU163 ARG164 ARG165 CYS166 LEU167 LEU168 GLN169 GLY170 THR171 GLY172 VAL173 PRO174 GLU175 ALA176 VAL177 GLU178 LYS179 ASP180 LEU181 ALA182 ASN183 ILE184 ARG185 SER186 GLU187 TYR188 GLN189 SER190 ILE191 VAL192 LEU193 PRO194 PHE195 MET196 GLU197 ALA198 HIS199 PRO200 ASP201 LEU202 PHE203 SER204 LEU205 ARG206 VAL207 ARG208 SER209 LEU210 GLU211 LEU212 TYR213 HIS214 GLN215 LEU216 VAL217 ALA218 LEU219 VAL220 MET221 ALA222 TYR223 SER224 PHE225 GLN226 GLU227 PRO228 LEU229 GLU230 LYS236 GLU237 PRO238 ASN239 SER240 PRO241 VAL242 MET243 VAL244 PRO245 ALA246 ALA247 ASP248 ILE249 LEU250 ASN251 HIS252 LEU253 ALA254 ASN255 HIS256 ASN257 ALA258 ASN259 LEU260 GLU261 TYR262 SER263 ALA264 ASN265 CYS266 LEU267 ARG268 MET269 VAL270 ALA271 THR272 GLN273 PRO274 ILE275 PRO276 LYS277 GLY278 HIS279 GLU280 ILE281 PHE282 ASN283 THR284 TYR285 GLY286 GLN287 MET288 ALA289 ASN290 TRP291 GLN292 LEU293 ILE294 HIS295 MET296 TYR297 GLY298 PHE299 VAL300 GLU301 PRO302 TYR303 PRO304 ASP305 ASN306 THR307 ASP308 ASP309 THR310 ALA311 ASP312 ILE313 GLN314 MET315 VAL316 THR317 VAL318 ARG319 GLU320 ALA321 ALA322 LEU323 GLN324 GLY325 THR326 LYS327 THR328 GLU329 ALA330 GLU331 ARG332 HIS333 LEU334 VAL335 TYR336 GLU337 ARG338 TRP339 ASP340 PHE341 LEU342 CYS343 LYS344 LEU345 GLU346 MET347 VAL348 GLY349 GLU350 GLU351 GLY352 ALA353 PHE354 VAL355 ILE356 GLY357 ARG358 GLU359 GLU360 VAL361 LEU362 THR363 GLU364 GLU365 GLU366 LEU367 THR368 THR369 THR370 LEU371 LYS372 VAL373 LEU374 CYS375 MET376 PRO377 ALA378 GLU379 GLU380 PHE381 ARG382 GLU383 LEU384 LYS385 ASP386 GLN387 LYS394 ARG395 GLU396 GLU397 GLY398 SER399 LEU400 THR401 ILE402 THR403 ASN404 ILE405 PRO406 LYS407 LEU408 LYS409 ALA410 SER411 TRP412 ARG413 GLN414 LEU415 LEU416 GLN417 ASN418 SER419 VAL420 LEU421 LEU422 THR423 LEU424 GLN425 THR426 TYR427 ALA428 THR429 ASP430 LEU431 LYS432 THR433 ASP434 GLN435 GLY436 LEU437 LEU438 SER439 ASN440 LYS441 GLU442 VAL443 TYR444 ALA445 LYS446 LEU447 SER448 TRP449 ARG450 GLU451 GLN452 GLN453 ALA454 LEU455 GLN456 VAL457 ARG458 TYR459 GLY460 GLN461 LYS462 MET463 ILE464 LEU465 HIS466 GLN467 LEU468 LEU469 GLU470 LEU471 THR472 SER473 |
Unit 2 | LYS310 |
Unit 3 | LEU19 ASP20 PRO21 VAL22 ALA23 CYS24 PHE25 LEU26 SER27 TRP28 CYS29 ARG30 ARG31 VAL32 GLY33 LEU34 GLU35 LEU36 SER37 PRO38 LYS39 VAL64 ALA65 VAL66 SER67 ARG68 GLN69 GLY70 THR71 VAL72 ALA73 GLY74 TYR75 GLY76 MET77 VAL78 ALA79 ARG80 GLU81 SER82 VAL83 GLN84 ALA85 GLY86 GLU87 LEU88 LEU89 PHE90 VAL91 VAL92 PRO93 ARG94 ALA95 ALA96 LEU97 LEU98 SER99 GLN100 HIS101 THR102 CYS103 SER104 ILE105 GLY106 GLY107 LEU108 LEU109 GLU110 ARG111 GLU112 ARG113 VAL114 ALA115 LEU116 GLN117 SER118 GLN119 SER120 GLY121 TRP122 VAL123 PRO124 LEU125 LEU126 LEU127 ALA128 LEU129 LEU130 HIS131 GLU132 LEU133 GLN134 ALA135 PRO136 ALA137 SER138 ARG139 TRP140 ARG141 PRO142 TYR143 PHE144 ALA145 LEU146 TRP147 PRO148 GLU149 LEU150 GLY151 ARG152 LEU153 GLU154 HIS155 PRO156 MET157 PHE158 TRP159 PRO160 GLU161 GLU162 GLU163 ARG164 ARG165 CYS166 LEU167 LEU168 GLN169 GLY170 THR171 GLY172 VAL173 PRO174 GLU175 ALA176 VAL177 GLU178 LYS179 ASP180 LEU181 ALA182 ASN183 ILE184 ARG185 SER186 GLU187 TYR188 GLN189 SER190 ILE191 VAL192 LEU193 PRO194 PHE195 MET196 GLU197 ALA198 HIS199 PRO200 ASP201 LEU202 PHE203 SER204 LEU205 ARG206 VAL207 ARG208 SER209 LEU210 GLU211 LEU212 TYR213 HIS214 GLN215 LEU216 VAL217 ALA218 LEU219 VAL220 MET221 ALA222 TYR223 SER224 PHE225 GLN226 GLU227 PRO228 LEU229 GLU230 GLU231 PRO238 ASN239 SER240 PRO241 VAL242 MET243 VAL244 PRO245 ALA246 ALA247 ASP248 ILE249 LEU250 ASN251 HIS252 LEU253 ALA254 ASN255 HIS256 ASN257 ALA258 ASN259 LEU260 GLU261 TYR262 SER263 ALA264 ASN265 CYS266 LEU267 ARG268 MET269 VAL270 ALA271 THR272 GLN273 PRO274 ILE275 PRO276 LYS277 GLY278 HIS279 GLU280 ILE281 PHE282 ASN283 THR284 TYR285 GLY286 GLN287 MET288 ALA289 ASN290 TRP291 GLN292 LEU293 ILE294 HIS295 MET296 TYR297 GLY298 PHE299 VAL300 GLU301 PRO302 TYR303 PRO304 ASP305 ASN306 THR307 ASP308 ASP309 THR310 ALA311 ASP312 ILE313 GLN314 MET315 VAL316 THR317 VAL318 ARG319 GLU320 ALA321 ALA322 LEU323 GLN324 GLY325 THR326 LYS327 THR328 GLU329 ALA330 GLU331 ARG332 HIS333 LEU334 VAL335 TYR336 GLU337 ARG338 TRP339 ASP340 PHE341 LEU342 CYS343 LYS344 LEU345 GLU346 MET347 VAL348 GLY349 GLU350 GLU351 GLY352 ALA353 PHE354 VAL355 ILE356 GLY357 ARG358 GLU359 GLU360 VAL361 LEU362 THR363 GLU364 GLU365 GLU366 LEU367 THR368 THR369 THR370 LEU371 LYS372 VAL373 LEU374 CYS375 MET376 PRO377 ALA378 GLU379 GLU380 PHE381 ARG382 GLU383 LEU384 LYS385 ASP386 GLN387 SER399 LEU400 THR401 ILE402 THR403 ASN404 ILE405 PRO406 LYS407 LEU408 LYS409 ALA410 SER411 TRP412 ARG413 GLN414 LEU415 LEU416 GLN417 ASN418 SER419 VAL420 LEU421 LEU422 THR423 LEU424 GLN425 THR426 TYR427 ALA428 THR429 ASP430 LEU431 LYS432 THR433 ASP434 GLN435 GLY436 LEU437 LEU438 SER439 ASN440 LYS441 GLU442 VAL443 TYR444 ALA445 LYS446 LEU447 SER448 TRP449 ARG450 GLU451 GLN452 GLN453 ALA454 LEU455 GLN456 VAL457 ARG458 TYR459 GLY460 GLN461 LYS462 MET463 ILE464 LEU465 HIS466 GLN467 LEU468 LEU469 GLU470 LEU471 THR472 SER473 |
Unit 4 | LYS310 |
Unit 5 | EDO474 EDO475 EDO476 EDO477 EDO478 EDO479 EDO480 EDO481 EDO482 EDO483 EDO484 SAM6734 |
Unit 6 | EDO474 EDO475 EDO476 EDO477 EDO478 EDO479 SAM6735 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |