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Sequence, Chains, Asymmetric and Biological Units

Title PEPTIDE DEFORMYLASE FROM VIBRIO CHOLERAE
Keywords STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFEC DISEASES, CSGID, PEPTIDE DEFORMYLASE, METAL BINDING, HYDROL METAL BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3QU1     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PEPTIDE DEFORMYLASE 2  A 168 1309 0
2  Protein   PEPTIDE DEFORMYLASE 2  B 167 1301 0
3  Ligand   PEPTIDE DEFORMYLASE 2  A 5 0 5
4  Ligand   PEPTIDE DEFORMYLASE 2  B 5 0 9
5 Water     306 0 306
total       651 2610 320

Proteins
Unit 1 MET1 ALA2 VAL3 LEU4 GLU5 ILE6 LEU7 THR8 ALA9 PRO10 ASP11 PRO12 ARG13 LEU14 ARG15 VAL16 GLN17 SER18 LYS19 GLN20 VAL21 THR22 ASP23 VAL24 ALA25 SER26 VAL27 GLN28 THR29 LEU30 ILE31 ASP32 ASP33 LEU34 LEU35 ASP36 THR37 LEU38 TYR39 ALA40 THR41 ASP42 ASN43 GLY44 ILE45 GLY46 LEU47 ALA48 ALA49 PRO50 GLN51 VAL52 GLY53 ARG54 GLU55 GLU56 ALA57 ILE58 VAL59 VAL60 ILE61 ASP62 LEU63 SER64 ASP65 ASN66 ARG67 ASP68 GLN69 PRO70 LEU71 VAL72 LEU73 ILE74 ASN75 PRO76 LYS77 VAL78 VAL79 SER80 GLY81 SER82 ASN83 LYS84 GLU85 MET86 GLY87 GLN88 GLU89 GLY90 CYS91 LEU92 SER93 VAL94 PRO95 ASP96 TYR97 TYR98 ALA99 ASP100 VAL101 GLU102 ARG103 TYR104 THR105 SER106 VAL107 VAL108 VAL109 GLU110 ALA111 LEU112 ASP113 ARG114 GLU115 GLY116 LYS117 PRO118 LEU119 ARG120 ILE121 GLU122 THR123 SER124 ASP125 PHE126 LEU127 ALA128 ILE129 VAL130 MET131 GLN132 HIS133 GLU134 ILE135 ASP136 HIS137 LEU138 SER139 GLY140 ASN141 LEU142 PHE143 ILE144 ASP145 TYR146 LEU147 SER148 PRO149 LEU150 LYS151 GLN152 GLN153 MET154 ALA155 MET156 LYS157 LYS158 VAL159 LYS160 LYS161 HIS162 VAL163 LYS164 ASN165 ARG166 ALA167 ARG168
Unit 2 ALA2 VAL3 LEU4 GLU5 ILE6 LEU7 THR8 ALA9 PRO10 ASP11 PRO12 ARG13 LEU14 ARG15 VAL16 GLN17 SER18 LYS19 GLN20 VAL21 THR22 ASP23 VAL24 ALA25 SER26 VAL27 GLN28 THR29 LEU30 ILE31 ASP32 ASP33 LEU34 LEU35 ASP36 THR37 LEU38 TYR39 ALA40 THR41 ASP42 ASN43 GLY44 ILE45 GLY46 LEU47 ALA48 ALA49 PRO50 GLN51 VAL52 GLY53 ARG54 GLU55 GLU56 ALA57 ILE58 VAL59 VAL60 ILE61 ASP62 LEU63 SER64 ASP65 ASN66 ARG67 ASP68 GLN69 PRO70 LEU71 VAL72 LEU73 ILE74 ASN75 PRO76 LYS77 VAL78 VAL79 SER80 GLY81 SER82 ASN83 LYS84 GLU85 MET86 GLY87 GLN88 GLU89 GLY90 CYS91 LEU92 SER93 VAL94 PRO95 ASP96 TYR97 TYR98 ALA99 ASP100 VAL101 GLU102 ARG103 TYR104 THR105 SER106 VAL107 VAL108 VAL109 GLU110 ALA111 LEU112 ASP113 ARG114 GLU115 GLY116 LYS117 PRO118 LEU119 ARG120 ILE121 GLU122 THR123 SER124 ASP125 PHE126 LEU127 ALA128 ILE129 VAL130 MET131 GLN132 HIS133 GLU134 ILE135 ASP136 HIS137 LEU138 SER139 GLY140 ASN141 LEU142 PHE143 ILE144 ASP145 TYR146 LEU147 SER148 PRO149 LEU150 LYS151 GLN152 GLN153 MET154 ALA155 MET156 LYS157 LYS158 VAL159 LYS160 LYS161 HIS162 VAL163 LYS164 ASN165 ARG166 ALA167 ARG168

Ligands
Unit 3 ZN501 ZN503 ZN505 ZN507 CL508
Unit 4 ZN502 ZN504 ZN506 CL509 SO4511

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany