Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF STAPHYLOCOCCUS AUREUS HFQ IN COMPLEX WITH A7 RN
Keywords HEXAMER, SM/LSM FAMILY, RNA CHAPERONE, TRANSLATIONAL REGULAT SRNA, CYTOPLASMA, CHAPERONE-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3QSU     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA CHAPERONE HFQ  A 60 486 0
2  Protein   RNA CHAPERONE HFQ  B 61 495 0
3  Protein   RNA CHAPERONE HFQ  H 61 495 0
4  Protein   RNA CHAPERONE HFQ  I 60 490 0
5  Protein   RNA CHAPERONE HFQ  K 61 499 0
6  Protein   RNA CHAPERONE HFQ  M 61 495 0
7  Protein   RNA CHAPERONE HFQ  C 60 490 0
8  Protein   RNA CHAPERONE HFQ  D 62 504 0
9  Protein   RNA CHAPERONE HFQ  E 61 495 0
10  Protein   RNA CHAPERONE HFQ  F 60 482 0
11  Protein   RNA CHAPERONE HFQ  G 61 499 0
12  Protein   RNA CHAPERONE HFQ  J 61 499 0
13  Protein   RNA CHAPERONE HFQ  N 61 491 0
14  Protein   RNA CHAPERONE HFQ  S 61 493 0
15  RNA    R 4 88 0
16  RNA    P 4 88 0
17  Ligand   RNA CHAPERONE HFQ  A 2 0 2
18  Ligand   RNA CHAPERONE HFQ  B 2 0 2
19  Ligand   RNA CHAPERONE HFQ  H 2 0 2
20  Ligand   RNA CHAPERONE HFQ  I 2 0 2
21  Ligand   RNA CHAPERONE HFQ  K 2 0 2
22  Ligand   RNA CHAPERONE HFQ  M 2 0 2
23  Ligand   RNA CHAPERONE HFQ  C 3 0 3
24  Ligand   RNA CHAPERONE HFQ  D 2 0 2
25  Ligand   RNA CHAPERONE HFQ  E 2 0 2
26  Ligand   RNA CHAPERONE HFQ  F 2 0 2
27  Ligand   RNA CHAPERONE HFQ  G 2 0 2
28  Ligand   RNA CHAPERONE HFQ  J 2 0 2
29  Ligand   RNA CHAPERONE HFQ  N 2 0 2
30  Ligand   RNA CHAPERONE HFQ  S 2 0 2
31 Water     207 0 207
total       1095 7089 236
Proteins
Unit 1 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65
Unit 2 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65 GLU66
Unit 3 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65 GLU66
Unit 4 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65
Unit 5 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65 GLU66
Unit 6 GLU5 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65
Unit 7 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65
Unit 8 GLU5 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65 GLU66
Unit 9 GLU5 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65
Unit 10 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65
Unit 11 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65 GLU66
Unit 12 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65 GLU66
Unit 13 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65 GLU66
Unit 14 ASN6 ILE7 GLN8 ASP9 LYS10 ALA11 LEU12 GLU13 ASN14 PHE15 LYS16 ALA17 ASN18 GLN19 THR20 GLU21 VAL22 THR23 VAL24 PHE25 PHE26 LEU27 ASN28 GLY29 PHE30 GLN31 MET32 LYS33 GLY34 VAL35 ILE36 GLU37 GLU38 TYR39 ASP40 LYS41 TYR42 VAL43 VAL44 SER45 LEU46 ASN47 SER48 GLN49 GLY50 LYS51 GLN52 HIS53 LEU54 ILE55 TYR56 LYS57 HIS58 ALA59 ILE60 SER61 THR62 TYR63 THR64 VAL65 GLU66
Nucleic acids
Unit 15 A1 A2 A3 A4
Unit 16 A5 A6 A7 A8
Ligands
Unit 17 ZN78 ZN79
Unit 18 ZN78 ZN79
Unit 19 ZN78 ZN79
Unit 20 ZN78 ZN79
Unit 21 ZN78 ZN79
Unit 22 ZN78 ZN79
Unit 23 ZN78 ZN79 ZN80
Unit 24 ZN78 ZN79
Unit 25 ZN78 ZN79
Unit 26 ZN78 ZN79
Unit 27 ZN78 ZN79
Unit 28 ZN78 ZN79
Unit 29 ZN78 ZN79
Unit 30 ZN78 ZN79
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany