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Sequence, Chains, Asymmetric and Biological Units

Title PROBING OXYGEN CHANNELS IN MELANOCARPUS ALBOMYCES LACCASE
Keywords CU BINDING, XE BINDING, LACCASE, MULTICOPPER OXIDASE, OXIDOR
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3QPK     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LACCASE-1  A 559 4369 0
2  Protein   LACCASE-1  B 559 4369 0
3  Ligand    C 2 0 28
4  Ligand    D 2 0 28
5  Ligand    E 2 0 28
6  Ligand    F 2 0 28
7  Ligand    G 2 0 28
8  Ligand    H 2 0 28
9  Ligand    I 2 0 28
10  Ligand   LACCASE-1  A 12 0 46
11  Ligand   LACCASE-1  B 11 0 50
12 Water     1224 0 1224
total       2379 8738 1516
Proteins
Unit 1 GLU1 PRO2 THR3 CYS4 ASN5 THR6 PRO7 SER8 ASN9 ARG10 ALA11 CYS12 TRP13 SER14 ASP15 GLY16 PHE17 ASP18 ILE19 ASN20 THR21 ASP22 TYR23 GLU24 VAL25 SER26 THR27 PRO28 ASP29 THR30 GLY31 VAL32 THR33 GLN34 SER35 TYR36 VAL37 PHE38 ASN39 LEU40 THR41 GLU42 VAL43 ASP44 ASN45 TRP46 MET47 GLY48 PRO49 ASP50 GLY51 VAL52 VAL53 LYS54 GLU55 LYS56 VAL57 MET58 LEU59 ILE60 ASN61 GLY62 ASN63 ILE64 MET65 GLY66 PRO67 ASN68 ILE69 VAL70 ALA71 ASN72 TRP73 GLY74 ASP75 THR76 VAL77 GLU78 VAL79 THR80 VAL81 ILE82 ASN83 ASN84 LEU85 VAL86 THR87 ASN88 GLY89 THR90 SER91 ILE92 HIS93 TRP94 HIS95 GLY96 ILE97 HIS98 GLN99 LYS100 ASP101 THR102 ASN103 LEU104 HIS105 ASP106 GLY107 ALA108 ASN109 GLY110 VAL111 THR112 GLU113 CYS114 PRO115 ILE116 PRO117 PRO118 LYS119 GLY120 GLY121 GLN122 ARG123 THR124 TYR125 ARG126 TRP127 ARG128 ALA129 ARG130 GLN131 TYR132 GLY133 THR134 SER135 TRP136 TYR137 HIS138 SER139 HIS140 PHE141 SER142 ALA143 GLN144 TYR145 GLY146 ASN147 GLY148 VAL149 VAL150 GLY151 THR152 ILE153 GLN154 ILE155 ASN156 GLY157 PRO158 ALA159 SER160 LEU161 PRO162 TYR163 ASP164 ILE165 ASP166 LEU167 GLY168 VAL169 PHE170 PRO171 ILE172 THR173 ASP174 TYR175 TYR176 TYR177 ARG178 ALA179 ALA180 ASP181 ASP182 LEU183 VAL184 HIS185 PHE186 THR187 GLN188 ASN189 ASN190 ALA191 PRO192 PRO193 PHE194 SER195 ASP196 ASN197 VAL198 LEU199 ILE200 ASN201 GLY202 THR203 ALA204 VAL205 ASN206 PRO207 ASN208 THR209 GLY210 GLU211 GLY212 GLN213 TYR214 ALA215 ASN216 VAL217 THR218 LEU219 THR220 PRO221 GLY222 LYS223 ARG224 HIS225 ARG226 LEU227 ARG228 ILE229 LEU230 ASN231 THR232 SER233 THR234 GLU235 ASN236 HIS237 PHE238 GLN239 VAL240 SER241 LEU242 VAL243 ASN244 HIS245 THR246 MET247 THR248 VAL249 ILE250 ALA251 ALA252 ASP253 MET254 VAL255 PRO256 VAL257 ASN258 ALA259 MET260 THR261 VAL262 ASP263 SER264 LEU265 PHE266 LEU267 ALA268 VAL269 GLY270 GLN271 ARG272 TYR273 ASP274 VAL275 VAL276 ILE277 ASP278 ALA279 SER280 ARG281 ALA282 PRO283 ASP284 ASN285 TYR286 TRP287 PHE288 ASN289 VAL290 THR291 PHE292 GLY293 GLY294 GLN295 ALA296 ALA297 CYS298 GLY299 GLY300 SER301 LEU302 ASN303 PRO304 HIS305 PRO306 ALA307 ALA308 ILE309 PHE310 HIS311 TYR312 ALA313 GLY314 ALA315 PRO316 GLY317 GLY318 LEU319 PRO320 THR321 ASP322 GLU323 GLY324 THR325 PRO326 PRO327 VAL328 ASP329 HIS330 GLN331 CYS332 LEU333 ASP334 THR335 LEU336 ASP337 VAL338 ARG339 PRO340 VAL341 VAL342 PRO343 ARG344 SER345 VAL346 PRO347 VAL348 ASN349 SER350 PHE351 VAL352 LYS353 ARG354 PRO355 ASP356 ASN357 THR358 LEU359 PRO360 VAL361 ALA362 LEU363 ASP364 LEU365 THR366 GLY367 THR368 PRO369 LEU370 PHE371 VAL372 TRP373 LYS374 VAL375 ASN376 GLY377 SER378 ASP379 ILE380 ASN381 VAL382 ASP383 TRP384 GLY385 LYS386 PRO387 ILE388 ILE389 ASP390 TYR391 ILE392 LEU393 THR394 GLY395 ASN396 THR397 SER398 TYR399 PRO400 VAL401 SER402 ASP403 ASN404 ILE405 VAL406 GLN407 VAL408 ASP409 ALA410 VAL411 ASP412 GLN413 TRP414 THR415 TYR416 TRP417 LEU418 ILE419 GLU420 ASN421 ASP422 PRO423 GLU424 GLY425 PRO426 PHE427 SER428 LEU429 PRO430 HIS431 PRO432 MET433 HIS434 LEU435 HIS436 GLY437 HIS438 ASP439 PHE440 LEU441 VAL442 LEU443 GLY444 ARG445 SER446 PRO447 ASP448 VAL449 PRO450 ALA451 ALA452 SER453 GLN454 GLN455 ARG456 PHE457 VAL458 PHE459 ASP460 PRO461 ALA462 VAL463 ASP464 LEU465 ALA466 ARG467 LEU468 ASN469 GLY470 ASP471 ASN472 PRO473 PRO474 ARG475 ARG476 ASP477 THR478 THR479 MET480 LEU481 PRO482 ALA483 GLY484 GLY485 TRP486 LEU487 LEU488 LEU489 ALA490 PHE491 ARG492 THR493 ASP494 ASN495 PRO496 GLY497 ALA498 TRP499 LEU500 PHE501 HIS502 CYS503 HIS504 ILE505 ALA506 TRP507 HIS508 VAL509 SER510 GLY511 GLY512 LEU513 SER514 VAL515 ASP516 PHE517 LEU518 GLU519 ARG520 PRO521 ALA522 ASP523 LEU524 ARG525 GLN526 ARG527 ILE528 SER529 GLN530 GLU531 ASP532 GLU533 ASP534 ASP535 PHE536 ASN537 ARG538 VAL539 CYS540 ASP541 GLU542 TRP543 ARG544 ALA545 TYR546 TRP547 PRO548 THR549 ASN550 PRO551 TYR552 PRO553 LYS554 ILE555 ASP556 SER557 GLY558 LEU559
Unit 2 GLU1 PRO2 THR3 CYS4 ASN5 THR6 PRO7 SER8 ASN9 ARG10 ALA11 CYS12 TRP13 SER14 ASP15 GLY16 PHE17 ASP18 ILE19 ASN20 THR21 ASP22 TYR23 GLU24 VAL25 SER26 THR27 PRO28 ASP29 THR30 GLY31 VAL32 THR33 GLN34 SER35 TYR36 VAL37 PHE38 ASN39 LEU40 THR41 GLU42 VAL43 ASP44 ASN45 TRP46 MET47 GLY48 PRO49 ASP50 GLY51 VAL52 VAL53 LYS54 GLU55 LYS56 VAL57 MET58 LEU59 ILE60 ASN61 GLY62 ASN63 ILE64 MET65 GLY66 PRO67 ASN68 ILE69 VAL70 ALA71 ASN72 TRP73 GLY74 ASP75 THR76 VAL77 GLU78 VAL79 THR80 VAL81 ILE82 ASN83 ASN84 LEU85 VAL86 THR87 ASN88 GLY89 THR90 SER91 ILE92 HIS93 TRP94 HIS95 GLY96 ILE97 HIS98 GLN99 LYS100 ASP101 THR102 ASN103 LEU104 HIS105 ASP106 GLY107 ALA108 ASN109 GLY110 VAL111 THR112 GLU113 CYS114 PRO115 ILE116 PRO117 PRO118 LYS119 GLY120 GLY121 GLN122 ARG123 THR124 TYR125 ARG126 TRP127 ARG128 ALA129 ARG130 GLN131 TYR132 GLY133 THR134 SER135 TRP136 TYR137 HIS138 SER139 HIS140 PHE141 SER142 ALA143 GLN144 TYR145 GLY146 ASN147 GLY148 VAL149 VAL150 GLY151 THR152 ILE153 GLN154 ILE155 ASN156 GLY157 PRO158 ALA159 SER160 LEU161 PRO162 TYR163 ASP164 ILE165 ASP166 LEU167 GLY168 VAL169 PHE170 PRO171 ILE172 THR173 ASP174 TYR175 TYR176 TYR177 ARG178 ALA179 ALA180 ASP181 ASP182 LEU183 VAL184 HIS185 PHE186 THR187 GLN188 ASN189 ASN190 ALA191 PRO192 PRO193 PHE194 SER195 ASP196 ASN197 VAL198 LEU199 ILE200 ASN201 GLY202 THR203 ALA204 VAL205 ASN206 PRO207 ASN208 THR209 GLY210 GLU211 GLY212 GLN213 TYR214 ALA215 ASN216 VAL217 THR218 LEU219 THR220 PRO221 GLY222 LYS223 ARG224 HIS225 ARG226 LEU227 ARG228 ILE229 LEU230 ASN231 THR232 SER233 THR234 GLU235 ASN236 HIS237 PHE238 GLN239 VAL240 SER241 LEU242 VAL243 ASN244 HIS245 THR246 MET247 THR248 VAL249 ILE250 ALA251 ALA252 ASP253 MET254 VAL255 PRO256 VAL257 ASN258 ALA259 MET260 THR261 VAL262 ASP263 SER264 LEU265 PHE266 LEU267 ALA268 VAL269 GLY270 GLN271 ARG272 TYR273 ASP274 VAL275 VAL276 ILE277 ASP278 ALA279 SER280 ARG281 ALA282 PRO283 ASP284 ASN285 TYR286 TRP287 PHE288 ASN289 VAL290 THR291 PHE292 GLY293 GLY294 GLN295 ALA296 ALA297 CYS298 GLY299 GLY300 SER301 LEU302 ASN303 PRO304 HIS305 PRO306 ALA307 ALA308 ILE309 PHE310 HIS311 TYR312 ALA313 GLY314 ALA315 PRO316 GLY317 GLY318 LEU319 PRO320 THR321 ASP322 GLU323 GLY324 THR325 PRO326 PRO327 VAL328 ASP329 HIS330 GLN331 CYS332 LEU333 ASP334 THR335 LEU336 ASP337 VAL338 ARG339 PRO340 VAL341 VAL342 PRO343 ARG344 SER345 VAL346 PRO347 VAL348 ASN349 SER350 PHE351 VAL352 LYS353 ARG354 PRO355 ASP356 ASN357 THR358 LEU359 PRO360 VAL361 ALA362 LEU363 ASP364 LEU365 THR366 GLY367 THR368 PRO369 LEU370 PHE371 VAL372 TRP373 LYS374 VAL375 ASN376 GLY377 SER378 ASP379 ILE380 ASN381 VAL382 ASP383 TRP384 GLY385 LYS386 PRO387 ILE388 ILE389 ASP390 TYR391 ILE392 LEU393 THR394 GLY395 ASN396 THR397 SER398 TYR399 PRO400 VAL401 SER402 ASP403 ASN404 ILE405 VAL406 GLN407 VAL408 ASP409 ALA410 VAL411 ASP412 GLN413 TRP414 THR415 TYR416 TRP417 LEU418 ILE419 GLU420 ASN421 ASP422 PRO423 GLU424 GLY425 PRO426 PHE427 SER428 LEU429 PRO430 HIS431 PRO432 MET433 HIS434 LEU435 HIS436 GLY437 HIS438 ASP439 PHE440 LEU441 VAL442 LEU443 GLY444 ARG445 SER446 PRO447 ASP448 VAL449 PRO450 ALA451 ALA452 SER453 GLN454 GLN455 ARG456 PHE457 VAL458 PHE459 ASP460 PRO461 ALA462 VAL463 ASP464 LEU465 ALA466 ARG467 LEU468 ASN469 GLY470 ASP471 ASN472 PRO473 PRO474 ARG475 ARG476 ASP477 THR478 THR479 MET480 LEU481 PRO482 ALA483 GLY484 GLY485 TRP486 LEU487 LEU488 LEU489 ALA490 PHE491 ARG492 THR493 ASP494 ASN495 PRO496 GLY497 ALA498 TRP499 LEU500 PHE501 HIS502 CYS503 HIS504 ILE505 ALA506 TRP507 HIS508 VAL509 SER510 GLY511 GLY512 LEU513 SER514 VAL515 ASP516 PHE517 LEU518 GLU519 ARG520 PRO521 ALA522 ASP523 LEU524 ARG525 GLN526 ARG527 ILE528 SER529 GLN530 GLU531 ASP532 GLU533 ASP534 ASP535 PHE536 ASN537 ARG538 VAL539 CYS540 ASP541 GLU542 TRP543 ARG544 ALA545 TYR546 TRP547 PRO548 THR549 ASN550 PRO551 TYR552 PRO553 LYS554 ILE555 ASP556 SER557 GLY558 LEU559
Ligands
Unit 3 NAG1 NAG2
Unit 4 NAG1 NAG2
Unit 5 NAG1 NAG2
Unit 6 NAG1 NAG2
Unit 7 NAG1 NAG2
Unit 8 NAG1 NAG2
Unit 9 NAG1 NAG2
Unit 10 XE574 XE575 XE576 SO4577 SO4578 CU601 CU602 CU603 CU604 CL610 NAG700 NAG750
Unit 11 XE574 XE575 XE576 CU601 CU602 CU603 CU604 CL610 NAG700 NAG720 NAG750
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany