3QPE - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF GALACTURONATE DEHYDRATASE FROM GEOBACIL COMPLEXED WITH D-GALACTURONATE AND 5-KETO-4-DEOXY-D-GALACTU
• Keywords: ENOLASE FOLD, GALACTURONATE DEHYDRATASE, METAL BINDING PROTE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3QPE	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN	A	385	3033	0
2	Protein	MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN	B	371	2936	0
3	Protein	MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN	C	376	2971	0
4	Protein	MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN	D	385	3033	0
5	Ligand	MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN	A	3	0	15
6	Ligand	MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN	B	3	0	14
7	Ligand	MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN	C	4	0	20
8	Ligand	MANDELATE RACEMASE/MUCONATE LACTONIZING PROTEIN	D	3	0	14
9	Water			755	0	755
total				2285	11973	818

Proteins

Unit 1	LEU 3 ASN 4 ILE 5 THR 6 GLY 7 ILE 8 GLN 9 SER 10 ASP 11 TRP 12 LYS 13 VAL 14 GLU 15 LYS 16 ILE 17 GLU 18 PHE 19 ALA 20 LYS 21 LEU 22 THR 23 GLY 24 GLU 25 ARG 26 ALA 27 ARG 28 SER 29 ALA 30 GLY 31 ALA 32 ASN 33 GLY 34 ARG 35 ILE 36 GLY 37 VAL 38 HIS 39 GLY 40 LYS 41 SER 42 CYS 43 THR 44 VAL 45 ASP 46 ILE 47 ALA 48 ARG 49 ILE 50 THR 51 ILE 52 ASP 53 GLY 54 GLN 55 THR 56 GLY 57 TYR 58 GLY 59 SER 60 SER 61 ILE 62 HIS 63 MET 64 THR 65 PRO 66 GLU 67 TRP 68 ALA 69 GLU 70 ASP 71 VAL 72 ILE 73 GLY 74 ARG 75 ARG 76 LEU 77 LEU 78 ASP 79 LEU 80 PHE 81 ASP 82 ASP 83 ARG 84 GLY 85 ARG 86 LEU 87 ARG 88 GLU 89 ALA 90 TYR 91 ARG 92 LEU 93 GLN 94 LEU 95 GLU 96 TYR 97 PRO 98 VAL 99 LEU 100 ASP 101 TRP 102 LEU 103 GLY 104 GLN 105 ARG 106 GLN 107 GLY 108 LYS 109 PRO 110 VAL 111 TYR 112 ASP 113 LEU 114 VAL 115 SER 116 GLY 117 ALA 118 HIS 119 LEU 120 GLU 121 THR 122 GLY 123 ALA 124 SER 125 LEU 126 VAL 127 VAL 128 PRO 129 CYS 130 TYR 131 ASP 132 THR 133 SER 134 LEU 135 TYR 136 PHE 137 ASP 138 ASP 139 LEU 140 HIS 141 LEU 142 ALA 143 ASP 144 GLU 145 ARG 146 ALA 147 ALA 148 VAL 149 ALA 150 LEU 151 MET 152 GLN 153 GLU 154 GLU 155 ALA 156 MET 157 GLN 158 GLY 159 TYR 160 ALA 161 LYS 162 GLY 163 GLN 164 ARG 165 HIS 166 PHE 167 LYS 168 ILE 169 LYS 170 VAL 171 GLY 172 ARG 173 GLY 174 GLY 175 ARG 176 HIS 177 MET 178 PRO 179 LEU 180 TRP 181 GLU 182 GLY 183 THR 184 LYS 185 ARG 186 ASP 187 ILE 188 ALA 189 ILE 190 VAL 191 ARG 192 GLY 193 ILE 194 SER 195 GLU 196 VAL 197 ALA 198 GLY 199 PRO 200 ALA 201 GLY 202 LYS 203 ILE 204 MET 205 ILE 206 ASP 207 ALA 208 ASN 209 ASN 210 ALA 211 TYR 212 ASN 213 LEU 214 ASN 215 LEU 216 THR 217 LYS 218 GLU 219 VAL 220 LEU 221 ALA 222 ALA 223 LEU 224 SER 225 ASP 226 VAL 227 ASN 228 LEU 229 TYR 230 TRP 231 LEU 232 GLU 233 GLU 234 ALA 235 PHE 236 HIS 237 GLU 238 ASP 239 GLU 240 ALA 241 LEU 242 TYR 243 GLU 244 ASP 245 LEU 246 LYS 247 GLU 248 TRP 249 LEU 250 GLY 251 GLN 252 ARG 253 GLY 254 GLN 255 ASN 256 VAL 257 LEU 258 ILE 259 ALA 260 ASP 261 GLY 262 GLU 263 GLY 264 LEU 265 ALA 266 SER 267 PRO 268 HIS 269 LEU 270 ILE 271 GLU 272 TRP 273 ALA 274 THR 275 ARG 276 GLY 277 ARG 278 VAL 279 ASP 280 VAL 281 LEU 282 GLN 283 TYR 284 ASP 285 ILE 286 ILE 287 TRP 288 PRO 289 GLY 290 PHE 291 THR 292 HIS 293 TRP 294 MET 295 GLU 296 LEU 297 GLY 298 GLU 299 LYS 300 LEU 301 ASP 302 ALA 303 HIS 304 GLY 305 LEU 306 ARG 307 SER 308 ALA 309 PRO 310 HIS 311 CYS 312 TYR 313 GLY 314 ASN 315 ALA 316 TYR 317 GLY 318 ILE 319 TYR 320 ALA 321 SER 322 GLY 323 HIS 324 LEU 325 SER 326 ALA 327 ALA 328 VAL 329 ARG 330 ASN 331 PHE 332 GLU 333 PHE 334 VAL 335 GLU 336 TYR 337 ASP 338 ASP 339 ILE 340 THR 341 ILE 342 GLU 343 GLY 344 MET 345 ASP 346 VAL 347 SER 348 GLY 349 TYR 350 ARG 351 ILE 352 GLU 353 ASN 354 GLY 355 GLU 356 ILE 357 HIS 358 VAL 359 PRO 360 ALA 361 THR 362 PRO 363 GLY 364 PHE 365 GLY 366 ILE 367 VAL 368 PHE 369 ASP 370 ASP 371 GLU 372 LEU 373 VAL 374 THR 375 TYR 376 LEU 377 ILE 378 ASN 379 ARG 380 SER 381 GLY 382 TRP 383 SER 384 GLU 385 GLY 386 HIS 387
Unit 2	ILE 8 GLN 9 SER 10 ASP 11 TRP 12 LYS 13 VAL 14 GLU 15 LYS 16 ILE 17 GLU 18 PHE 19 ALA 20 LYS 21 LEU 22 THR 23 GLY 24 GLU 25 ARG 26 ALA 27 ARG 28 SER 29 ALA 30 GLY 31 ALA 32 ASN 33 GLY 34 ARG 35 ILE 36 GLY 37 VAL 38 HIS 39 GLY 40 LYS 41 SER 42 CYS 43 THR 44 VAL 45 ASP 46 ILE 47 ALA 48 ARG 49 ILE 50 THR 51 ILE 52 ASP 53 GLY 54 GLN 55 THR 56 GLY 57 TYR 58 GLY 59 SER 60 SER 61 ILE 62 HIS 63 MET 64 THR 65 PRO 66 GLU 67 TRP 68 ALA 69 GLU 70 ASP 71 VAL 72 ILE 73 GLY 74 ARG 75 ARG 76 LEU 77 LEU 78 ASP 79 LEU 80 PHE 81 ASP 82 ASP 83 ARG 84 GLY 85 ARG 86 LEU 87 ARG 88 GLU 89 ALA 90 TYR 91 ARG 92 LEU 93 GLN 94 LEU 95 GLU 96 TYR 97 PRO 98 VAL 99 LEU 100 ASP 101 TRP 102 LEU 103 GLY 104 GLN 105 ARG 106 GLN 107 GLY 108 LYS 109 PRO 110 VAL 111 TYR 112 ASP 113 LEU 114 VAL 115 SER 116 SER 125 LEU 126 VAL 127 VAL 128 PRO 129 CYS 130 TYR 131 ASP 132 THR 133 SER 134 LEU 135 TYR 136 PHE 137 ASP 138 ASP 139 LEU 140 HIS 141 LEU 142 ALA 143 ASP 144 GLU 145 ARG 146 ALA 147 ALA 148 VAL 149 ALA 150 LEU 151 MET 152 GLN 153 GLU 154 GLU 155 ALA 156 MET 157 GLN 158 GLY 159 TYR 160 ALA 161 LYS 162 GLY 163 GLN 164 ARG 165 HIS 166 PHE 167 LYS 168 ILE 169 LYS 170 VAL 171 GLY 172 ARG 173 GLY 174 GLY 175 ARG 176 HIS 177 MET 178 PRO 179 LEU 180 TRP 181 GLU 182 GLY 183 THR 184 LYS 185 ARG 186 ASP 187 ILE 188 ALA 189 ILE 190 VAL 191 ARG 192 GLY 193 ILE 194 SER 195 GLU 196 VAL 197 ALA 198 GLY 199 PRO 200 ALA 201 GLY 202 LYS 203 ILE 204 MET 205 ILE 206 ASP 207 ALA 208 ASN 209 ASN 210 ALA 211 TYR 212 ASN 213 LEU 214 ASN 215 LEU 216 THR 217 LYS 218 GLU 219 VAL 220 LEU 221 ALA 222 ALA 223 LEU 224 SER 225 ASP 226 VAL 227 ASN 228 LEU 229 TYR 230 TRP 231 LEU 232 GLU 233 GLU 234 ALA 235 PHE 236 HIS 237 GLU 238 ASP 239 GLU 240 ALA 241 LEU 242 TYR 243 GLU 244 ASP 245 LEU 246 LYS 247 GLU 248 TRP 249 LEU 250 GLY 251 GLN 252 ARG 253 GLY 254 GLN 255 ASN 256 VAL 257 LEU 258 ILE 259 ALA 260 ASP 261 GLY 262 GLU 263 GLY 264 LEU 265 ALA 266 SER 267 PRO 268 HIS 269 LEU 270 ILE 271 GLU 272 TRP 273 ALA 274 THR 275 ARG 276 GLY 277 ARG 278 VAL 279 ASP 280 VAL 281 LEU 282 GLN 283 TYR 284 ASP 285 ILE 286 ILE 287 TRP 288 PRO 289 GLY 290 PHE 291 THR 292 HIS 293 TRP 294 MET 295 GLU 296 LEU 297 GLY 298 GLU 299 LYS 300 LEU 301 ASP 302 ALA 303 HIS 304 GLY 305 LEU 306 ARG 307 SER 308 ALA 309 PRO 310 HIS 311 CYS 312 TYR 313 GLY 314 ASN 315 ALA 316 TYR 317 GLY 318 ILE 319 TYR 320 ALA 321 SER 322 GLY 323 HIS 324 LEU 325 SER 326 ALA 327 ALA 328 VAL 329 ARG 330 ASN 331 PHE 332 GLU 333 PHE 334 VAL 335 GLU 336 TYR 337 ASP 338 ASP 339 ILE 340 THR 341 ILE 342 GLU 343 GLY 344 MET 345 ASP 346 VAL 347 SER 348 GLY 349 TYR 350 ARG 351 ILE 352 GLU 353 ASN 354 GLY 355 GLU 356 ILE 357 HIS 358 VAL 359 PRO 360 ALA 361 THR 362 PRO 363 GLY 364 PHE 365 GLY 366 ILE 367 VAL 368 PHE 369 ASP 370 ASP 371 GLU 372 LEU 373 VAL 374 THR 375 TYR 376 LEU 377 ILE 378 ASN 379 ARG 380 SER 381 GLY 382 TRP 383 SER 384 GLU 385 GLY 386
Unit 3	LEU 3 ASN 4 ILE 5 THR 6 GLY 7 ILE 8 GLN 9 SER 10 ASP 11 TRP 12 LYS 13 VAL 14 GLU 15 LYS 16 ILE 17 GLU 18 PHE 19 ALA 20 LYS 21 LEU 22 THR 23 GLY 24 GLU 25 ARG 26 ALA 27 ARG 28 SER 29 ALA 30 GLY 31 ALA 32 ASN 33 GLY 34 ARG 35 ILE 36 GLY 37 VAL 38 HIS 39 GLY 40 LYS 41 SER 42 CYS 43 THR 44 VAL 45 ASP 46 ILE 47 ALA 48 ARG 49 ILE 50 THR 51 ILE 52 ASP 53 GLY 54 GLN 55 THR 56 GLY 57 TYR 58 GLY 59 SER 60 SER 61 ILE 62 HIS 63 MET 64 THR 65 PRO 66 GLU 67 TRP 68 ALA 69 GLU 70 ASP 71 VAL 72 ILE 73 GLY 74 ARG 75 ARG 76 LEU 77 LEU 78 ASP 79 LEU 80 PHE 81 ASP 82 ASP 83 ARG 84 GLY 85 ARG 86 LEU 87 ARG 88 GLU 89 ALA 90 TYR 91 ARG 92 LEU 93 GLN 94 LEU 95 GLU 96 TYR 97 PRO 98 VAL 99 LEU 100 ASP 101 TRP 102 LEU 103 GLY 104 GLN 105 ARG 106 GLN 107 GLY 108 LYS 109 PRO 110 VAL 111 TYR 112 ASP 113 LEU 114 VAL 115 SER 116 SER 125 LEU 126 VAL 127 VAL 128 PRO 129 CYS 130 TYR 131 ASP 132 THR 133 SER 134 LEU 135 TYR 136 PHE 137 ASP 138 ASP 139 LEU 140 HIS 141 LEU 142 ALA 143 ASP 144 GLU 145 ARG 146 ALA 147 ALA 148 VAL 149 ALA 150 LEU 151 MET 152 GLN 153 GLU 154 GLU 155 ALA 156 MET 157 GLN 158 GLY 159 TYR 160 ALA 161 LYS 162 GLY 163 GLN 164 ARG 165 HIS 166 PHE 167 LYS 168 ILE 169 LYS 170 VAL 171 GLY 172 ARG 173 GLY 174 GLY 175 ARG 176 HIS 177 MET 178 PRO 179 LEU 180 TRP 181 GLU 182 GLY 183 THR 184 LYS 185 ARG 186 ASP 187 ILE 188 ALA 189 ILE 190 VAL 191 ARG 192 GLY 193 ILE 194 SER 195 GLU 196 VAL 197 ALA 198 GLY 199 PRO 200 ALA 201 GLY 202 LYS 203 ILE 204 MET 205 ILE 206 ASP 207 ALA 208 ASN 209 ASN 210 ALA 211 TYR 212 ASN 213 LEU 214 ASN 215 LEU 216 THR 217 LYS 218 GLU 219 VAL 220 LEU 221 ALA 222 ALA 223 LEU 224 SER 225 ASP 226 VAL 227 ASN 228 LEU 229 TYR 230 TRP 231 LEU 232 GLU 233 GLU 234 ALA 235 PHE 236 HIS 237 GLU 238 ASP 239 GLU 240 ALA 241 LEU 242 TYR 243 GLU 244 ASP 245 LEU 246 LYS 247 GLU 248 TRP 249 LEU 250 GLY 251 GLN 252 ARG 253 GLY 254 GLN 255 ASN 256 VAL 257 LEU 258 ILE 259 ALA 260 ASP 261 GLY 262 GLU 263 GLY 264 LEU 265 ALA 266 SER 267 PRO 268 HIS 269 LEU 270 ILE 271 GLU 272 TRP 273 ALA 274 THR 275 ARG 276 GLY 277 ARG 278 VAL 279 ASP 280 VAL 281 LEU 282 GLN 283 TYR 284 ASP 285 ILE 286 ILE 287 TRP 288 PRO 289 GLY 290 PHE 291 THR 292 HIS 293 TRP 294 MET 295 GLU 296 LEU 297 GLY 298 GLU 299 LYS 300 LEU 301 ASP 302 ALA 303 HIS 304 GLY 305 LEU 306 ARG 307 SER 308 ALA 309 PRO 310 HIS 311 CYS 312 TYR 313 GLY 314 ASN 315 ALA 316 TYR 317 GLY 318 ILE 319 TYR 320 ALA 321 SER 322 GLY 323 HIS 324 LEU 325 SER 326 ALA 327 ALA 328 VAL 329 ARG 330 ASN 331 PHE 332 GLU 333 PHE 334 VAL 335 GLU 336 TYR 337 ASP 338 ASP 339 ILE 340 THR 341 ILE 342 GLU 343 GLY 344 MET 345 ASP 346 VAL 347 SER 348 GLY 349 TYR 350 ARG 351 ILE 352 GLU 353 ASN 354 GLY 355 GLU 356 ILE 357 HIS 358 VAL 359 PRO 360 ALA 361 THR 362 PRO 363 GLY 364 PHE 365 GLY 366 ILE 367 VAL 368 PHE 369 ASP 370 ASP 371 GLU 372 LEU 373 VAL 374 THR 375 TYR 376 LEU 377 ILE 378 ASN 379 ARG 380 SER 381 GLY 382 TRP 383 SER 384 GLU 385 GLY 386
Unit 4	LEU 3 ASN 4 ILE 5 THR 6 GLY 7 ILE 8 GLN 9 SER 10 ASP 11 TRP 12 LYS 13 VAL 14 GLU 15 LYS 16 ILE 17 GLU 18 PHE 19 ALA 20 LYS 21 LEU 22 THR 23 GLY 24 GLU 25 ARG 26 ALA 27 ARG 28 SER 29 ALA 30 GLY 31 ALA 32 ASN 33 GLY 34 ARG 35 ILE 36 GLY 37 VAL 38 HIS 39 GLY 40 LYS 41 SER 42 CYS 43 THR 44 VAL 45 ASP 46 ILE 47 ALA 48 ARG 49 ILE 50 THR 51 ILE 52 ASP 53 GLY 54 GLN 55 THR 56 GLY 57 TYR 58 GLY 59 SER 60 SER 61 ILE 62 HIS 63 MET 64 THR 65 PRO 66 GLU 67 TRP 68 ALA 69 GLU 70 ASP 71 VAL 72 ILE 73 GLY 74 ARG 75 ARG 76 LEU 77 LEU 78 ASP 79 LEU 80 PHE 81 ASP 82 ASP 83 ARG 84 GLY 85 ARG 86 LEU 87 ARG 88 GLU 89 ALA 90 TYR 91 ARG 92 LEU 93 GLN 94 LEU 95 GLU 96 TYR 97 PRO 98 VAL 99 LEU 100 ASP 101 TRP 102 LEU 103 GLY 104 GLN 105 ARG 106 GLN 107 GLY 108 LYS 109 PRO 110 VAL 111 TYR 112 ASP 113 LEU 114 VAL 115 SER 116 GLY 117 ALA 118 HIS 119 LEU 120 GLU 121 THR 122 GLY 123 ALA 124 SER 125 LEU 126 VAL 127 VAL 128 PRO 129 CYS 130 TYR 131 ASP 132 THR 133 SER 134 LEU 135 TYR 136 PHE 137 ASP 138 ASP 139 LEU 140 HIS 141 LEU 142 ALA 143 ASP 144 GLU 145 ARG 146 ALA 147 ALA 148 VAL 149 ALA 150 LEU 151 MET 152 GLN 153 GLU 154 GLU 155 ALA 156 MET 157 GLN 158 GLY 159 TYR 160 ALA 161 LYS 162 GLY 163 GLN 164 ARG 165 HIS 166 PHE 167 LYS 168 ILE 169 LYS 170 VAL 171 GLY 172 ARG 173 GLY 174 GLY 175 ARG 176 HIS 177 MET 178 PRO 179 LEU 180 TRP 181 GLU 182 GLY 183 THR 184 LYS 185 ARG 186 ASP 187 ILE 188 ALA 189 ILE 190 VAL 191 ARG 192 GLY 193 ILE 194 SER 195 GLU 196 VAL 197 ALA 198 GLY 199 PRO 200 ALA 201 GLY 202 LYS 203 ILE 204 MET 205 ILE 206 ASP 207 ALA 208 ASN 209 ASN 210 ALA 211 TYR 212 ASN 213 LEU 214 ASN 215 LEU 216 THR 217 LYS 218 GLU 219 VAL 220 LEU 221 ALA 222 ALA 223 LEU 224 SER 225 ASP 226 VAL 227 ASN 228 LEU 229 TYR 230 TRP 231 LEU 232 GLU 233 GLU 234 ALA 235 PHE 236 HIS 237 GLU 238 ASP 239 GLU 240 ALA 241 LEU 242 TYR 243 GLU 244 ASP 245 LEU 246 LYS 247 GLU 248 TRP 249 LEU 250 GLY 251 GLN 252 ARG 253 GLY 254 GLN 255 ASN 256 VAL 257 LEU 258 ILE 259 ALA 260 ASP 261 GLY 262 GLU 263 GLY 264 LEU 265 ALA 266 SER 267 PRO 268 HIS 269 LEU 270 ILE 271 GLU 272 TRP 273 ALA 274 THR 275 ARG 276 GLY 277 ARG 278 VAL 279 ASP 280 VAL 281 LEU 282 GLN 283 TYR 284 ASP 285 ILE 286 ILE 287 TRP 288 PRO 289 GLY 290 PHE 291 THR 292 HIS 293 TRP 294 MET 295 GLU 296 LEU 297 GLY 298 GLU 299 LYS 300 LEU 301 ASP 302 ALA 303 HIS 304 GLY 305 LEU 306 ARG 307 SER 308 ALA 309 PRO 310 HIS 311 CYS 312 TYR 313 GLY 314 ASN 315 ALA 316 TYR 317 GLY 318 ILE 319 TYR 320 ALA 321 SER 322 GLY 323 HIS 324 LEU 325 SER 326 ALA 327 ALA 328 VAL 329 ARG 330 ASN 331 PHE 332 GLU 333 PHE 334 VAL 335 GLU 336 TYR 337 ASP 338 ASP 339 ILE 340 THR 341 ILE 342 GLU 343 GLY 344 MET 345 ASP 346 VAL 347 SER 348 GLY 349 TYR 350 ARG 351 ILE 352 GLU 353 ASN 354 GLY 355 GLU 356 ILE 357 HIS 358 VAL 359 PRO 360 ALA 361 THR 362 PRO 363 GLY 364 PHE 365 GLY 366 ILE 367 VAL 368 PHE 369 ASP 370 ASP 371 GLU 372 LEU 373 VAL 374 THR 375 TYR 376 LEU 377 ILE 378 ASN 379 ARG 380 SER 381 GLY 382 TRP 383 SER 384 GLU 385 GLY 386 HIS 387

Ligands

Unit 5	MG 393 MG 394 DGU 401
Unit 6	MG 393 MG 394 D54 401
Unit 7	MG 393 MG 394 GOL 395 D54 401
Unit 8	MG 393 MG 394 D54 401