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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN EXONUCLEASE 1 EXO1 (D173A) IN COM DNA (COMPLEX I)
Keywords EXONUCLEASE, HYDROLASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3QE9     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   EXONUCLEASE 1  Y 345 2711 0
2  Other macromolecule    C 13 262 0
3  Other macromolecule   DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3')  D 10 206 0
4  Protein   EXONUCLEASE 1  Z 344 2706 0
5  Other macromolecule    A 12 242 0
6  Other macromolecule   DNA (5'-D(P*TP*CP*GP*AP*CP*TP*AP*GP*CP*G)-3')  B 10 206 0
7  Ligand   EXONUCLEASE 1  Y 2 0 2
8  Ligand   EXONUCLEASE 1  Z 2 0 2
9 Water     312 0 312
total       1050 6333 316
Proteins
Unit 1 GLY2 ILE3 GLN4 GLY5 LEU6 LEU7 GLN8 PHE9 ILE10 LYS11 GLU12 ALA13 SER14 GLU15 PRO16 ILE17 HIS18 VAL19 ARG20 LYS21 TYR22 LYS23 GLY24 GLN25 VAL26 VAL27 ALA28 VAL29 ASP30 THR31 TYR32 CYS33 TRP34 LEU35 HIS36 LYS37 GLY38 ALA39 ILE40 ALA41 CYS42 ALA43 GLU44 LYS45 LEU46 ALA47 LYS48 GLY49 GLU50 PRO51 THR52 ASP53 ARG54 TYR55 VAL56 GLY57 PHE58 CYS59 MET60 LYS61 PHE62 VAL63 ASN64 MET65 LEU66 LEU67 SER68 HIS69 GLY70 ILE71 LYS72 PRO73 ILE74 LEU75 VAL76 PHE77 ASP78 GLY79 CYS80 THR81 LEU82 PRO83 SER84 LYS85 LYS86 GLU87 VAL88 GLU89 ARG90 SER91 ARG92 ARG93 GLU94 ARG95 ARG96 GLN97 ALA98 ASN99 LEU100 LEU101 LYS102 GLY103 LYS104 GLN105 LEU106 LEU107 ARG108 GLU109 GLY110 LYS111 VAL112 SER113 GLU114 ALA115 ARG116 GLU117 CYS118 PHE119 THR120 ARG121 SER122 ILE123 ASN124 ILE125 THR126 HIS127 ALA128 MET129 ALA130 HIS131 LYS132 VAL133 ILE134 LYS135 ALA136 ALA137 ARG138 SER139 GLN140 GLY141 VAL142 ASP143 CYS144 LEU145 VAL146 ALA147 PRO148 TYR149 GLU150 ALA151 ASP152 ALA153 GLN154 LEU155 ALA156 TYR157 LEU158 ASN159 LYS160 ALA161 GLY162 ILE163 VAL164 GLN165 ALA166 ILE167 ILE168 THR169 GLU170 ASP171 SER172 ALA173 LEU174 LEU175 ALA176 PHE177 GLY178 CYS179 LYS180 LYS181 VAL182 ILE183 LEU184 LYS185 MET186 ASP187 GLN188 PHE189 GLY190 ASN191 GLY192 LEU193 GLU194 ILE195 ASP196 GLN197 ALA198 ARG199 LEU200 GLY201 MET202 CYS203 ARG204 GLN205 LEU206 GLY207 ASP208 VAL209 PHE210 THR211 GLU212 GLU213 LYS214 PHE215 ARG216 TYR217 MET218 CYS219 ILE220 LEU221 SER222 GLY223 CYS224 ASP225 TYR226 LEU227 SER228 SER229 LEU230 ARG231 GLY232 ILE233 GLY234 LEU235 ALA236 LYS237 ALA238 CYS239 LYS240 VAL241 LEU242 ARG243 LEU244 ALA245 ASN246 ASN247 PRO248 ASP249 ILE250 VAL251 LYS252 VAL253 ILE254 LYS255 LYS256 ILE257 GLY258 HIS259 TYR260 LEU261 LYS262 MET263 ASN264 ILE265 THR266 VAL267 PRO268 GLU269 ASP270 TYR271 ILE272 ASN273 GLY274 PHE275 ILE276 ARG277 ALA278 ASN279 ASN280 THR281 PHE282 LEU283 TYR284 GLN285 LEU286 VAL287 PHE288 ASP289 PRO290 ILE291 LYS292 ARG293 LYS294 LEU295 ILE296 PRO297 LEU298 ASN299 ALA300 TYR301 GLU302 ASP303 ASP304 VAL305 ASP306 PRO307 GLU308 THR309 LEU310 SER311 TYR312 ALA313 GLY314 GLN315 TYR316 VAL317 ASP318 ASP319 SER320 ILE321 ALA322 LEU323 GLN324 ILE325 ALA326 LEU327 GLY328 ASN329 LYS330 ASP331 ILE332 ASN333 THR334 PHE335 GLU336 GLN337 ILE338 ASP339 ASP340 TYR341 ASN342 PRO343 ASP344 THR345 ALA346
Unit 4 GLY2 ILE3 GLN4 GLY5 LEU6 LEU7 GLN8 PHE9 ILE10 LYS11 GLU12 ALA13 SER14 GLU15 PRO16 ILE17 HIS18 VAL19 ARG20 LYS21 TYR22 LYS23 GLY24 GLN25 VAL26 VAL27 ALA28 VAL29 ASP30 THR31 TYR32 CYS33 TRP34 LEU35 HIS36 LYS37 GLY38 ALA39 ILE40 ALA41 CYS42 ALA43 GLU44 LYS45 LEU46 ALA47 LYS48 GLY49 GLU50 PRO51 THR52 ASP53 ARG54 TYR55 VAL56 GLY57 PHE58 CYS59 MET60 LYS61 PHE62 VAL63 ASN64 MET65 LEU66 LEU67 SER68 HIS69 GLY70 ILE71 LYS72 PRO73 ILE74 LEU75 VAL76 PHE77 ASP78 GLY79 CYS80 THR81 LEU82 PRO83 SER84 LYS85 LYS86 GLU87 VAL88 GLU89 ARG90 SER91 ARG92 ARG93 GLU94 ARG95 ARG96 GLN97 ALA98 ASN99 LEU100 LEU101 LYS102 GLY103 LYS104 GLN105 LEU106 LEU107 ARG108 GLU109 GLY110 LYS111 VAL112 SER113 GLU114 ALA115 ARG116 GLU117 CYS118 PHE119 THR120 ARG121 SER122 ILE123 ASN124 ILE125 THR126 HIS127 ALA128 MET129 ALA130 HIS131 LYS132 VAL133 ILE134 LYS135 ALA136 ALA137 ARG138 SER139 GLN140 GLY141 VAL142 ASP143 CYS144 LEU145 VAL146 ALA147 PRO148 TYR149 GLU150 ALA151 ASP152 ALA153 GLN154 LEU155 ALA156 TYR157 LEU158 ASN159 LYS160 ALA161 GLY162 ILE163 VAL164 GLN165 ALA166 ILE167 ILE168 THR169 GLU170 ASP171 SER172 ALA173 LEU174 LEU175 ALA176 PHE177 GLY178 CYS179 LYS180 LYS181 VAL182 ILE183 LEU184 LYS185 MET186 ASP187 GLN188 PHE189 GLY190 ASN191 GLY192 LEU193 GLU194 ILE195 ASP196 GLN197 ALA198 ARG199 LEU200 GLY201 MET202 CYS203 ARG204 GLN205 LEU206 GLY207 ASP208 VAL209 PHE210 THR211 GLU212 GLU213 LYS214 PHE215 ARG216 TYR217 MET218 CYS219 ILE220 LEU221 SER222 GLY223 CYS224 ASP225 TYR226 LEU227 SER228 SER229 LEU230 ARG231 GLY232 ILE233 GLY234 LEU235 ALA236 LYS237 ALA238 CYS239 LYS240 VAL241 LEU242 ARG243 LEU244 ALA245 ASN246 ASN247 PRO248 ASP249 ILE250 VAL251 LYS252 VAL253 ILE254 LYS255 LYS256 ILE257 GLY258 HIS259 TYR260 LEU261 LYS262 MET263 ASN264 ILE265 THR266 VAL267 PRO268 GLU269 ASP270 TYR271 ILE272 ASN273 GLY274 PHE275 ILE276 ARG277 ALA278 ASN279 ASN280 THR281 PHE282 LEU283 TYR284 GLN285 LEU286 VAL287 PHE288 ASP289 PRO290 ILE291 LYS292 ARG293 LYS294 LEU295 ILE296 PRO297 LEU298 ASN299 ALA300 TYR301 GLU302 ASP303 ASP304 VAL305 ASP306 PRO307 GLU308 THR309 LEU310 SER311 TYR312 ALA313 GLY314 GLN315 TYR316 VAL317 ASP318 ASP319 SER320 ILE321 ALA322 LEU323 GLN324 ILE325 ALA326 LEU327 GLY328 ASN329 LYS330 ASP331 ILE332 ASN333 THR334 PHE335 GLU336 GLN337 ILE338 ASP339 ASP340 TYR341 ASN342 PRO343 ASP344 THR345
Other macromolecules
Unit 2 DC11 DG12 DC13 DT14 DA15 DG16 DT17 DC18 DG19 DA20 DC21 DA22 DT23
Unit 3 DT1 DC2 DG3 DA4 DC5 DT6 DA7 DG8 DC9 DG10
Unit 5 DC11 DG12 DC13 DT14 DA15 DG16 DT17 DC18 DG19 DA20 DC21 DA22
Unit 6 DT1 DC2 DG3 DA4 DC5 DT6 DA7 DG8 DC9 DG10
Ligands
Unit 7 K353 CA354
Unit 8 K353 CA354
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany