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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF XRCC4/XLF-CERNUNNOS COMPLEX
Keywords DSB REPAIR, NUCLEAR, RECOMBINATION-RECOMBINATION COMPLEX, DN PROTEIN-PROTEIN BINDING COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3Q4F     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NON-HOMOLOGOUS END-JOINING FACTOR 1  E 227 1807 0
2  Protein   NON-HOMOLOGOUS END-JOINING FACTOR 1  F 227 1807 0
3  Protein   DNA REPAIR PROTEIN XRCC4  C 157 1267 0
4  Protein   DNA REPAIR PROTEIN XRCC4  D 157 1267 0
5  Protein   NON-HOMOLOGOUS END-JOINING FACTOR 1  A 227 1807 0
6  Protein   NON-HOMOLOGOUS END-JOINING FACTOR 1  B 227 1807 0
7  Protein   DNA REPAIR PROTEIN XRCC4  G 157 1267 0
8  Protein   DNA REPAIR PROTEIN XRCC4  H 157 1267 0
total       1536 12296 0

Proteins
Unit 1 MET1 GLU2 GLU3 LEU4 GLU5 GLN6 GLY7 LEU8 LEU9 MET10 GLN11 PRO12 TRP13 ALA14 TRP15 LEU16 GLN17 LEU18 ALA19 GLU20 ASN21 SER22 LEU23 LEU24 ALA25 LYS26 VAL27 PHE28 ILE29 THR30 LYS31 GLN32 GLY33 TYR34 ALA35 LEU36 LEU37 VAL38 SER39 ASP40 LEU41 GLN42 GLN43 VAL44 TRP45 HIS46 GLU47 GLN48 VAL49 ASP50 THR51 SER52 VAL53 VAL54 SER55 GLN56 ARG57 ALA58 LYS59 GLU60 LEU61 ASN62 LYS63 ARG64 LEU65 THR66 ALA67 PRO68 PRO69 ALA70 ALA71 PHE72 LEU73 CYS74 HIS75 LEU76 ASP77 ASN78 LEU79 LEU80 ARG81 PRO82 LEU83 LEU84 LYS85 ASP86 ALA87 ALA88 HIS89 PRO90 SER91 GLU92 ALA93 THR94 PHE95 SER96 CYS97 ASP98 CYS99 VAL100 ALA101 ASP102 ALA103 LEU104 ILE105 LEU106 ARG107 VAL108 ARG109 SER110 GLU111 LEU112 SER113 GLY114 LEU115 PRO116 PHE117 TYR118 TRP119 ASN120 PHE121 HIS122 CYS123 MET124 LEU125 ALA126 SER127 PRO128 SER129 LEU130 VAL131 SER132 GLN133 HIS134 LEU135 ILE136 ARG137 PRO138 LEU139 MET140 GLY141 MET142 SER143 LEU144 ALA145 LEU146 GLN147 CYS148 GLN149 VAL150 ARG151 GLU152 LEU153 ALA154 THR155 LEU156 LEU157 HIS158 MET159 LYS160 ASP161 LEU162 GLU163 ILE164 GLN165 ASP166 TYR167 GLN168 GLU169 SER170 GLY171 ALA172 THR173 LEU174 ILE175 ARG176 ASP177 ARG178 LEU179 LYS180 THR181 GLU182 PRO183 PHE184 GLU185 GLU186 ASN187 SER188 PHE189 LEU190 GLU191 GLN192 PHE193 MET194 ILE195 GLU196 LYS197 LEU198 PRO199 GLU200 ALA201 CYS202 SER203 ILE204 GLY205 ASP206 GLY207 LYS208 PRO209 PHE210 VAL211 MET212 ASN213 LEU214 GLN215 ASP216 LEU217 TYR218 MET219 ALA220 VAL221 THR222 THR223 GLN224 HIS225 HIS226 HIS227
Unit 2 MET1 GLU2 GLU3 LEU4 GLU5 GLN6 GLY7 LEU8 LEU9 MET10 GLN11 PRO12 TRP13 ALA14 TRP15 LEU16 GLN17 LEU18 ALA19 GLU20 ASN21 SER22 LEU23 LEU24 ALA25 LYS26 VAL27 PHE28 ILE29 THR30 LYS31 GLN32 GLY33 TYR34 ALA35 LEU36 LEU37 VAL38 SER39 ASP40 LEU41 GLN42 GLN43 VAL44 TRP45 HIS46 GLU47 GLN48 VAL49 ASP50 THR51 SER52 VAL53 VAL54 SER55 GLN56 ARG57 ALA58 LYS59 GLU60 LEU61 ASN62 LYS63 ARG64 LEU65 THR66 ALA67 PRO68 PRO69 ALA70 ALA71 PHE72 LEU73 CYS74 HIS75 LEU76 ASP77 ASN78 LEU79 LEU80 ARG81 PRO82 LEU83 LEU84 LYS85 ASP86 ALA87 ALA88 HIS89 PRO90 SER91 GLU92 ALA93 THR94 PHE95 SER96 CYS97 ASP98 CYS99 VAL100 ALA101 ASP102 ALA103 LEU104 ILE105 LEU106 ARG107 VAL108 ARG109 SER110 GLU111 LEU112 SER113 GLY114 LEU115 PRO116 PHE117 TYR118 TRP119 ASN120 PHE121 HIS122 CYS123 MET124 LEU125 ALA126 SER127 PRO128 SER129 LEU130 VAL131 SER132 GLN133 HIS134 LEU135 ILE136 ARG137 PRO138 LEU139 MET140 GLY141 MET142 SER143 LEU144 ALA145 LEU146 GLN147 CYS148 GLN149 VAL150 ARG151 GLU152 LEU153 ALA154 THR155 LEU156 LEU157 HIS158 MET159 LYS160 ASP161 LEU162 GLU163 ILE164 GLN165 ASP166 TYR167 GLN168 GLU169 SER170 GLY171 ALA172 THR173 LEU174 ILE175 ARG176 ASP177 ARG178 LEU179 LYS180 THR181 GLU182 PRO183 PHE184 GLU185 GLU186 ASN187 SER188 PHE189 LEU190 GLU191 GLN192 PHE193 MET194 ILE195 GLU196 LYS197 LEU198 PRO199 GLU200 ALA201 CYS202 SER203 ILE204 GLY205 ASP206 GLY207 LYS208 PRO209 PHE210 VAL211 MET212 ASN213 LEU214 GLN215 ASP216 LEU217 TYR218 MET219 ALA220 VAL221 THR222 THR223 GLN224 HIS225 HIS226 HIS227
Unit 3 MET1 GLU2 ARG3 LYS4 ILE5 SER6 ARG7 ILE8 HIS9 LEU10 VAL11 SER12 GLU13 PRO14 SER15 ILE16 THR17 HIS18 PHE19 LEU20 GLN21 VAL22 SER23 TRP24 GLU25 LYS26 THR27 LEU28 GLU29 SER30 GLY31 PHE32 VAL33 ILE34 THR35 LEU36 THR37 ASP38 GLY39 HIS40 SER41 ALA42 TRP43 THR44 GLY45 THR46 VAL47 SER48 GLU49 SER50 GLU51 ILE52 SER53 GLN54 GLU55 ALA56 ASP57 ASP58 MET59 ALA60 MET61 GLU62 LYS63 GLY64 LYS65 TYR66 VAL67 GLY68 GLU69 LEU70 ARG71 LYS72 ALA73 LEU74 LEU75 SER76 GLY77 ALA78 GLY79 PRO80 ALA81 ASP82 VAL83 TYR84 THR85 PHE86 ASN87 PHE88 SER89 LYS90 GLU91 SER92 CYS93 TYR94 PHE95 PHE96 PHE97 GLU98 LYS99 ASN100 LEU101 LYS102 ASP103 VAL104 SER105 PHE106 ARG107 LEU108 GLY109 SER110 PHE111 ASN112 LEU113 GLU114 LYS115 VAL116 GLU117 ASN118 PRO119 ALA120 GLU121 VAL122 ILE123 ARG124 GLU125 LEU126 ILE127 CYS128 TYR129 CYS130 LEU131 ASP132 THR133 ILE134 ALA135 GLU136 ASN137 GLN138 ALA139 LYS140 ASN141 GLU142 HIS143 LEU144 GLN145 LYS146 GLU147 ASN148 GLU149 ARG150 LEU151 LEU152 ARG153 ASP154 TRP155 ASN156 ASP157
Unit 4 MET1 GLU2 ARG3 LYS4 ILE5 SER6 ARG7 ILE8 HIS9 LEU10 VAL11 SER12 GLU13 PRO14 SER15 ILE16 THR17 HIS18 PHE19 LEU20 GLN21 VAL22 SER23 TRP24 GLU25 LYS26 THR27 LEU28 GLU29 SER30 GLY31 PHE32 VAL33 ILE34 THR35 LEU36 THR37 ASP38 GLY39 HIS40 SER41 ALA42 TRP43 THR44 GLY45 THR46 VAL47 SER48 GLU49 SER50 GLU51 ILE52 SER53 GLN54 GLU55 ALA56 ASP57 ASP58 MET59 ALA60 MET61 GLU62 LYS63 GLY64 LYS65 TYR66 VAL67 GLY68 GLU69 LEU70 ARG71 LYS72 ALA73 LEU74 LEU75 SER76 GLY77 ALA78 GLY79 PRO80 ALA81 ASP82 VAL83 TYR84 THR85 PHE86 ASN87 PHE88 SER89 LYS90 GLU91 SER92 CYS93 TYR94 PHE95 PHE96 PHE97 GLU98 LYS99 ASN100 LEU101 LYS102 ASP103 VAL104 SER105 PHE106 ARG107 LEU108 GLY109 SER110 PHE111 ASN112 LEU113 GLU114 LYS115 VAL116 GLU117 ASN118 PRO119 ALA120 GLU121 VAL122 ILE123 ARG124 GLU125 LEU126 ILE127 CYS128 TYR129 CYS130 LEU131 ASP132 THR133 ILE134 ALA135 GLU136 ASN137 GLN138 ALA139 LYS140 ASN141 GLU142 HIS143 LEU144 GLN145 LYS146 GLU147 ASN148 GLU149 ARG150 LEU151 LEU152 ARG153 ASP154 TRP155 ASN156 ASP157
Unit 5 MET1 GLU2 GLU3 LEU4 GLU5 GLN6 GLY7 LEU8 LEU9 MET10 GLN11 PRO12 TRP13 ALA14 TRP15 LEU16 GLN17 LEU18 ALA19 GLU20 ASN21 SER22 LEU23 LEU24 ALA25 LYS26 VAL27 PHE28 ILE29 THR30 LYS31 GLN32 GLY33 TYR34 ALA35 LEU36 LEU37 VAL38 SER39 ASP40 LEU41 GLN42 GLN43 VAL44 TRP45 HIS46 GLU47 GLN48 VAL49 ASP50 THR51 SER52 VAL53 VAL54 SER55 GLN56 ARG57 ALA58 LYS59 GLU60 LEU61 ASN62 LYS63 ARG64 LEU65 THR66 ALA67 PRO68 PRO69 ALA70 ALA71 PHE72 LEU73 CYS74 HIS75 LEU76 ASP77 ASN78 LEU79 LEU80 ARG81 PRO82 LEU83 LEU84 LYS85 ASP86 ALA87 ALA88 HIS89 PRO90 SER91 GLU92 ALA93 THR94 PHE95 SER96 CYS97 ASP98 CYS99 VAL100 ALA101 ASP102 ALA103 LEU104 ILE105 LEU106 ARG107 VAL108 ARG109 SER110 GLU111 LEU112 SER113 GLY114 LEU115 PRO116 PHE117 TYR118 TRP119 ASN120 PHE121 HIS122 CYS123 MET124 LEU125 ALA126 SER127 PRO128 SER129 LEU130 VAL131 SER132 GLN133 HIS134 LEU135 ILE136 ARG137 PRO138 LEU139 MET140 GLY141 MET142 SER143 LEU144 ALA145 LEU146 GLN147 CYS148 GLN149 VAL150 ARG151 GLU152 LEU153 ALA154 THR155 LEU156 LEU157 HIS158 MET159 LYS160 ASP161 LEU162 GLU163 ILE164 GLN165 ASP166 TYR167 GLN168 GLU169 SER170 GLY171 ALA172 THR173 LEU174 ILE175 ARG176 ASP177 ARG178 LEU179 LYS180 THR181 GLU182 PRO183 PHE184 GLU185 GLU186 ASN187 SER188 PHE189 LEU190 GLU191 GLN192 PHE193 MET194 ILE195 GLU196 LYS197 LEU198 PRO199 GLU200 ALA201 CYS202 SER203 ILE204 GLY205 ASP206 GLY207 LYS208 PRO209 PHE210 VAL211 MET212 ASN213 LEU214 GLN215 ASP216 LEU217 TYR218 MET219 ALA220 VAL221 THR222 THR223 GLN224 HIS225 HIS226 HIS227
Unit 6 MET1 GLU2 GLU3 LEU4 GLU5 GLN6 GLY7 LEU8 LEU9 MET10 GLN11 PRO12 TRP13 ALA14 TRP15 LEU16 GLN17 LEU18 ALA19 GLU20 ASN21 SER22 LEU23 LEU24 ALA25 LYS26 VAL27 PHE28 ILE29 THR30 LYS31 GLN32 GLY33 TYR34 ALA35 LEU36 LEU37 VAL38 SER39 ASP40 LEU41 GLN42 GLN43 VAL44 TRP45 HIS46 GLU47 GLN48 VAL49 ASP50 THR51 SER52 VAL53 VAL54 SER55 GLN56 ARG57 ALA58 LYS59 GLU60 LEU61 ASN62 LYS63 ARG64 LEU65 THR66 ALA67 PRO68 PRO69 ALA70 ALA71 PHE72 LEU73 CYS74 HIS75 LEU76 ASP77 ASN78 LEU79 LEU80 ARG81 PRO82 LEU83 LEU84 LYS85 ASP86 ALA87 ALA88 HIS89 PRO90 SER91 GLU92 ALA93 THR94 PHE95 SER96 CYS97 ASP98 CYS99 VAL100 ALA101 ASP102 ALA103 LEU104 ILE105 LEU106 ARG107 VAL108 ARG109 SER110 GLU111 LEU112 SER113 GLY114 LEU115 PRO116 PHE117 TYR118 TRP119 ASN120 PHE121 HIS122 CYS123 MET124 LEU125 ALA126 SER127 PRO128 SER129 LEU130 VAL131 SER132 GLN133 HIS134 LEU135 ILE136 ARG137 PRO138 LEU139 MET140 GLY141 MET142 SER143 LEU144 ALA145 LEU146 GLN147 CYS148 GLN149 VAL150 ARG151 GLU152 LEU153 ALA154 THR155 LEU156 LEU157 HIS158 MET159 LYS160 ASP161 LEU162 GLU163 ILE164 GLN165 ASP166 TYR167 GLN168 GLU169 SER170 GLY171 ALA172 THR173 LEU174 ILE175 ARG176 ASP177 ARG178 LEU179 LYS180 THR181 GLU182 PRO183 PHE184 GLU185 GLU186 ASN187 SER188 PHE189 LEU190 GLU191 GLN192 PHE193 MET194 ILE195 GLU196 LYS197 LEU198 PRO199 GLU200 ALA201 CYS202 SER203 ILE204 GLY205 ASP206 GLY207 LYS208 PRO209 PHE210 VAL211 MET212 ASN213 LEU214 GLN215 ASP216 LEU217 TYR218 MET219 ALA220 VAL221 THR222 THR223 GLN224 HIS225 HIS226 HIS227
Unit 7 MET1 GLU2 ARG3 LYS4 ILE5 SER6 ARG7 ILE8 HIS9 LEU10 VAL11 SER12 GLU13 PRO14 SER15 ILE16 THR17 HIS18 PHE19 LEU20 GLN21 VAL22 SER23 TRP24 GLU25 LYS26 THR27 LEU28 GLU29 SER30 GLY31 PHE32 VAL33 ILE34 THR35 LEU36 THR37 ASP38 GLY39 HIS40 SER41 ALA42 TRP43 THR44 GLY45 THR46 VAL47 SER48 GLU49 SER50 GLU51 ILE52 SER53 GLN54 GLU55 ALA56 ASP57 ASP58 MET59 ALA60 MET61 GLU62 LYS63 GLY64 LYS65 TYR66 VAL67 GLY68 GLU69 LEU70 ARG71 LYS72 ALA73 LEU74 LEU75 SER76 GLY77 ALA78 GLY79 PRO80 ALA81 ASP82 VAL83 TYR84 THR85 PHE86 ASN87 PHE88 SER89 LYS90 GLU91 SER92 CYS93 TYR94 PHE95 PHE96 PHE97 GLU98 LYS99 ASN100 LEU101 LYS102 ASP103 VAL104 SER105 PHE106 ARG107 LEU108 GLY109 SER110 PHE111 ASN112 LEU113 GLU114 LYS115 VAL116 GLU117 ASN118 PRO119 ALA120 GLU121 VAL122 ILE123 ARG124 GLU125 LEU126 ILE127 CYS128 TYR129 CYS130 LEU131 ASP132 THR133 ILE134 ALA135 GLU136 ASN137 GLN138 ALA139 LYS140 ASN141 GLU142 HIS143 LEU144 GLN145 LYS146 GLU147 ASN148 GLU149 ARG150 LEU151 LEU152 ARG153 ASP154 TRP155 ASN156 ASP157
Unit 8 MET1 GLU2 ARG3 LYS4 ILE5 SER6 ARG7 ILE8 HIS9 LEU10 VAL11 SER12 GLU13 PRO14 SER15 ILE16 THR17 HIS18 PHE19 LEU20 GLN21 VAL22 SER23 TRP24 GLU25 LYS26 THR27 LEU28 GLU29 SER30 GLY31 PHE32 VAL33 ILE34 THR35 LEU36 THR37 ASP38 GLY39 HIS40 SER41 ALA42 TRP43 THR44 GLY45 THR46 VAL47 SER48 GLU49 SER50 GLU51 ILE52 SER53 GLN54 GLU55 ALA56 ASP57 ASP58 MET59 ALA60 MET61 GLU62 LYS63 GLY64 LYS65 TYR66 VAL67 GLY68 GLU69 LEU70 ARG71 LYS72 ALA73 LEU74 LEU75 SER76 GLY77 ALA78 GLY79 PRO80 ALA81 ASP82 VAL83 TYR84 THR85 PHE86 ASN87 PHE88 SER89 LYS90 GLU91 SER92 CYS93 TYR94 PHE95 PHE96 PHE97 GLU98 LYS99 ASN100 LEU101 LYS102 ASP103 VAL104 SER105 PHE106 ARG107 LEU108 GLY109 SER110 PHE111 ASN112 LEU113 GLU114 LYS115 VAL116 GLU117 ASN118 PRO119 ALA120 GLU121 VAL122 ILE123 ARG124 GLU125 LEU126 ILE127 CYS128 TYR129 CYS130 LEU131 ASP132 THR133 ILE134 ALA135 GLU136 ASN137 GLN138 ALA139 LYS140 ASN141 GLU142 HIS143 LEU144 GLN145 LYS146 GLU147 ASN148 GLU149 ARG150 LEU151 LEU152 ARG153 ASP154 TRP155 ASN156 ASP157

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany