3PZL - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF AGMATINE UREOHYDROLASE OF THERMOPLA VOLCANIUM
• Keywords: STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NE SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, HYDRO
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3PZL	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	AGMATINE UREOHYDROLASE	A	290	2216	56
2	Protein	AGMATINE UREOHYDROLASE	B	293	2240	56
3	Protein	AGMATINE UREOHYDROLASE	C	290	2216	56
4	Ligand	AGMATINE UREOHYDROLASE	A	2	0	2
5	Ligand	AGMATINE UREOHYDROLASE	B	2	0	2
6	Ligand	AGMATINE UREOHYDROLASE	C	2	0	2
7	Water			50	0	50
total				929	6672	224

Proteins

Unit 1	ALA 13 SER 14 GLU 15 LEU 16 ARG 17 SER 18 ILE 19 PHE 20 SER 21 LEU 22 LYS 23 LYS 24 ILE 25 ALA 26 ASP 27 ALA 28 VAL 29 ASN 30 GLY 31 TYR 32 GLU 33 GLU 34 ALA 35 LYS 36 TYR 37 VAL 38 VAL 39 PHE 40 GLY 41 ILE 42 PRO 43 PHE 44 ASP 45 ASN 46 THR 47 SER 48 SER 49 TYR 50 ARG 51 ARG 52 GLY 53 SER 54 LYS 55 TYR 56 ALA 57 PRO 58 ASP 59 SER 60 ILE 61 ARG 62 GLY 63 ALA 64 TYR 65 VAL 66 ASN 67 LEU 68 GLU 69 SER 70 TYR 71 GLU 72 TYR 73 SER 74 TYR 75 GLY 76 ILE 77 ASP 78 LEU 79 LEU 80 ALA 81 SER 82 GLY 83 MSE 84 ALA 85 ASP 86 LEU 87 GLY 88 ASP 89 MSE 90 GLU 91 GLU 92 SER 93 GLU 94 ASP 95 VAL 96 GLU 97 TYR 98 VAL 99 ILE 100 ASP 101 THR 102 VAL 103 GLU 104 SER 105 VAL 106 VAL 107 SER 108 ALA 109 VAL 110 MSE 111 SER 112 ASP 113 GLY 114 LYS 115 ILE 116 PRO 117 ILE 118 MSE 119 LEU 120 GLY 121 GLY 122 GLU 123 HIS 124 SER 125 ILE 126 THR 127 VAL 128 GLY 129 ALA 130 VAL 131 ARG 132 ALA 133 LEU 134 PRO 135 LYS 136 ASP 137 VAL 138 ASP 139 LEU 140 VAL 141 ILE 142 VAL 143 ASP 144 ALA 145 HIS 146 SER 147 ASP 148 PHE 149 ARG 150 SER 151 SER 152 TYR 153 MSE 154 GLY 155 ASN 156 LYS 157 TYR 158 ASN 159 HIS 160 ALA 161 CYS 162 VAL 163 THR 164 ARG 165 ARG 166 ALA 167 LEU 168 ASP 169 LEU 170 LEU 171 GLY 172 GLU 173 GLY 174 ARG 175 ILE 176 THR 177 SER 178 ILE 179 GLY 180 ILE 181 ARG 182 SER 183 VAL 184 SER 185 ARG 186 GLU 187 GLU 188 PHE 189 GLU 190 ASP 191 PRO 192 ASP 193 PHE 194 ARG 195 LYS 196 VAL 197 SER 198 PHE 199 ILE 200 SER 201 SER 202 PHE 203 ASP 204 VAL 205 LYS 206 LYS 207 ASN 208 GLY 209 ILE 210 ASP 211 LYS 212 TYR 213 ILE 214 GLU 215 GLU 216 VAL 217 ASP 218 ARG 219 LYS 220 SER 221 ARG 222 ARG 223 VAL 224 TYR 225 ILE 226 SER 227 VAL 228 ASP 229 MSE 230 ASP 231 GLY 232 ILE 233 ASP 234 PRO 235 ALA 236 TYR 237 ALA 238 PRO 239 ALA 240 VAL 241 GLY 242 THR 243 PRO 244 GLU 245 PRO 246 PHE 247 GLY 248 LEU 249 ALA 250 ASP 251 THR 252 ASP 253 VAL 254 ARG 255 ARG 256 LEU 257 ILE 258 GLU 259 ARG 260 LEU 261 SER 262 TYR 263 LYS 264 ALA 265 VAL 266 GLY 267 PHE 268 ASP 269 ILE 270 VAL 271 GLU 272 PHE 273 SER 274 PRO 275 LEU 276 TYR 277 ASP 278 ASN 279 GLY 280 ASN 281 THR 282 SER 283 MSE 284 LEU 285 ALA 286 ALA 287 LYS 288 LEU 289 LEU 290 GLN 291 VAL 292 PHE 293 ILE 294 ALA 295 SER 296 ARG 297 GLU 298 LYS 299 TYR 300 TYR 301 LYS 302
Unit 2	ALA 13 SER 14 GLU 15 LEU 16 ARG 17 SER 18 ILE 19 PHE 20 SER 21 LEU 22 LYS 23 LYS 24 ILE 25 ALA 26 ASP 27 ALA 28 VAL 29 ASN 30 GLY 31 TYR 32 GLU 33 GLU 34 ALA 35 LYS 36 TYR 37 VAL 38 VAL 39 PHE 40 GLY 41 ILE 42 PRO 43 PHE 44 ASP 45 ASN 46 THR 47 SER 48 SER 49 TYR 50 ARG 51 ARG 52 GLY 53 SER 54 LYS 55 TYR 56 ALA 57 PRO 58 ASP 59 SER 60 ILE 61 ARG 62 GLY 63 ALA 64 TYR 65 VAL 66 ASN 67 LEU 68 GLU 69 SER 70 TYR 71 GLU 72 TYR 73 SER 74 TYR 75 GLY 76 ILE 77 ASP 78 LEU 79 LEU 80 ALA 81 SER 82 GLY 83 MSE 84 ALA 85 ASP 86 LEU 87 GLY 88 ASP 89 MSE 90 GLU 91 GLU 92 SER 93 GLU 94 ASP 95 VAL 96 GLU 97 TYR 98 VAL 99 ILE 100 ASP 101 THR 102 VAL 103 GLU 104 SER 105 VAL 106 VAL 107 SER 108 ALA 109 VAL 110 MSE 111 SER 112 ASP 113 GLY 114 LYS 115 ILE 116 PRO 117 ILE 118 MSE 119 LEU 120 GLY 121 GLY 122 GLU 123 HIS 124 SER 125 ILE 126 THR 127 VAL 128 GLY 129 ALA 130 VAL 131 ARG 132 ALA 133 LEU 134 PRO 135 LYS 136 ASP 137 VAL 138 ASP 139 LEU 140 VAL 141 ILE 142 VAL 143 ASP 144 ALA 145 HIS 146 SER 147 ASP 148 PHE 149 ARG 150 SER 151 SER 152 TYR 153 MSE 154 GLY 155 ASN 156 LYS 157 TYR 158 ASN 159 HIS 160 ALA 161 CYS 162 VAL 163 THR 164 ARG 165 ARG 166 ALA 167 LEU 168 ASP 169 LEU 170 LEU 171 GLY 172 GLU 173 GLY 174 ARG 175 ILE 176 THR 177 SER 178 ILE 179 GLY 180 ILE 181 ARG 182 SER 183 VAL 184 SER 185 ARG 186 GLU 187 GLU 188 PHE 189 GLU 190 ASP 191 PRO 192 ASP 193 PHE 194 ARG 195 LYS 196 VAL 197 SER 198 PHE 199 ILE 200 SER 201 SER 202 PHE 203 ASP 204 VAL 205 LYS 206 LYS 207 ASN 208 GLY 209 ILE 210 ASP 211 LYS 212 TYR 213 ILE 214 GLU 215 GLU 216 VAL 217 ASP 218 ARG 219 LYS 220 SER 221 ARG 222 ARG 223 VAL 224 TYR 225 ILE 226 SER 227 VAL 228 ASP 229 MSE 230 ASP 231 GLY 232 ILE 233 ASP 234 PRO 235 ALA 236 TYR 237 ALA 238 PRO 239 ALA 240 VAL 241 GLY 242 THR 243 PRO 244 GLU 245 PRO 246 PHE 247 GLY 248 LEU 249 ALA 250 ASP 251 THR 252 ASP 253 VAL 254 ARG 255 ARG 256 LEU 257 ILE 258 GLU 259 ARG 260 LEU 261 SER 262 TYR 263 LYS 264 ALA 265 VAL 266 GLY 267 PHE 268 ASP 269 ILE 270 VAL 271 GLU 272 PHE 273 SER 274 PRO 275 LEU 276 TYR 277 ASP 278 ASN 279 GLY 280 ASN 281 THR 282 SER 283 MSE 284 LEU 285 ALA 286 ALA 287 LYS 288 LEU 289 LEU 290 GLN 291 VAL 292 PHE 293 ILE 294 ALA 295 SER 296 ARG 297 GLU 298 LYS 299 TYR 300 TYR 301 LYS 302 GLU 303 HIS 304 ILE 305
Unit 3	ALA 13 SER 14 GLU 15 LEU 16 ARG 17 SER 18 ILE 19 PHE 20 SER 21 LEU 22 LYS 23 LYS 24 ILE 25 ALA 26 ASP 27 ALA 28 VAL 29 ASN 30 GLY 31 TYR 32 GLU 33 GLU 34 ALA 35 LYS 36 TYR 37 VAL 38 VAL 39 PHE 40 GLY 41 ILE 42 PRO 43 PHE 44 ASP 45 ASN 46 THR 47 SER 48 SER 49 TYR 50 ARG 51 ARG 52 GLY 53 SER 54 LYS 55 TYR 56 ALA 57 PRO 58 ASP 59 SER 60 ILE 61 ARG 62 GLY 63 ALA 64 TYR 65 VAL 66 ASN 67 LEU 68 GLU 69 SER 70 TYR 71 GLU 72 TYR 73 SER 74 TYR 75 GLY 76 ILE 77 ASP 78 LEU 79 LEU 80 ALA 81 SER 82 GLY 83 MSE 84 ALA 85 ASP 86 LEU 87 GLY 88 ASP 89 MSE 90 GLU 91 GLU 92 SER 93 GLU 94 ASP 95 VAL 96 GLU 97 TYR 98 VAL 99 ILE 100 ASP 101 THR 102 VAL 103 GLU 104 SER 105 VAL 106 VAL 107 SER 108 ALA 109 VAL 110 MSE 111 SER 112 ASP 113 GLY 114 LYS 115 ILE 116 PRO 117 ILE 118 MSE 119 LEU 120 GLY 121 GLY 122 GLU 123 HIS 124 SER 125 ILE 126 THR 127 VAL 128 GLY 129 ALA 130 VAL 131 ARG 132 ALA 133 LEU 134 PRO 135 LYS 136 ASP 137 VAL 138 ASP 139 LEU 140 VAL 141 ILE 142 VAL 143 ASP 144 ALA 145 HIS 146 SER 147 ASP 148 PHE 149 ARG 150 SER 151 SER 152 TYR 153 MSE 154 GLY 155 ASN 156 LYS 157 TYR 158 ASN 159 HIS 160 ALA 161 CYS 162 VAL 163 THR 164 ARG 165 ARG 166 ALA 167 LEU 168 ASP 169 LEU 170 LEU 171 GLY 172 GLU 173 GLY 174 ARG 175 ILE 176 THR 177 SER 178 ILE 179 GLY 180 ILE 181 ARG 182 SER 183 VAL 184 SER 185 ARG 186 GLU 187 GLU 188 PHE 189 GLU 190 ASP 191 PRO 192 ASP 193 PHE 194 ARG 195 LYS 196 VAL 197 SER 198 PHE 199 ILE 200 SER 201 SER 202 PHE 203 ASP 204 VAL 205 LYS 206 LYS 207 ASN 208 GLY 209 ILE 210 ASP 211 LYS 212 TYR 213 ILE 214 GLU 215 GLU 216 VAL 217 ASP 218 ARG 219 LYS 220 SER 221 ARG 222 ARG 223 VAL 224 TYR 225 ILE 226 SER 227 VAL 228 ASP 229 MSE 230 ASP 231 GLY 232 ILE 233 ASP 234 PRO 235 ALA 236 TYR 237 ALA 238 PRO 239 ALA 240 VAL 241 GLY 242 THR 243 PRO 244 GLU 245 PRO 246 PHE 247 GLY 248 LEU 249 ALA 250 ASP 251 THR 252 ASP 253 VAL 254 ARG 255 ARG 256 LEU 257 ILE 258 GLU 259 ARG 260 LEU 261 SER 262 TYR 263 LYS 264 ALA 265 VAL 266 GLY 267 PHE 268 ASP 269 ILE 270 VAL 271 GLU 272 PHE 273 SER 274 PRO 275 LEU 276 TYR 277 ASP 278 ASN 279 GLY 280 ASN 281 THR 282 SER 283 MSE 284 LEU 285 ALA 286 ALA 287 LYS 288 LEU 289 LEU 290 GLN 291 VAL 292 PHE 293 ILE 294 ALA 295 SER 296 ARG 297 GLU 298 LYS 299 TYR 300 TYR 301 LYS 302

Ligands

Unit 4	MN 314 MN 315
Unit 5	MN 314 MN 315
Unit 6	MN 314 MN 315