3PW7 - Sequence, Chains, Asymmetric and Biological Units

• Title: TERNARY COMPLEX OF AFLATOXIN B1 ADDUCT MODIFIED DNA (AFB1-N7 DNA POLYMERASE IV AND INCOMING DCTP
• Keywords: TERNARY COMPLEX OF DPO4-DNA-DCTP, DNA POLYMERASE, DNA ADDUCT TRANSFERASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3PW7	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA POLYMERASE IV	A	343	2764	0
2	Other macromolecule	DNA (5'-D(*AP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP 3')	B	16	315	0
3	Other macromolecule		C	12	254	0
4	Protein	DNA POLYMERASE IV	E	343	2764	0
5	Other macromolecule	DNA (5'-D(*AP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP 3')	F	16	315	0
6	Other macromolecule		G	12	254	0
7	Ligand	DNA POLYMERASE IV	A	2	0	29
8	Ligand	DNA (5'-D(*AP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP 3')	B	1	0	24
9	Ligand	DNA POLYMERASE IV	E	2	0	29
10	Ligand	DNA (5'-D(*AP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP 3')	F	1	0	24
11	Water			85	0	85
total				833	6666	191

Proteins

Unit 1

HIS 2 HIS 3 MET 4 ILE 5 VAL 6 LEU 7 PHE 8 VAL 9 ASP 10 PHE 11 ASP 12 TYR 13 PHE 14 TYR 15 ALA 16 GLN 17 VAL 18 GLU 19 GLU 20 VAL 21 LEU 22 ASN 23 PRO 24 SER 25 LEU 26 LYS 27 GLY 28 LYS 29 PRO 30 VAL 31 VAL 32 VAL 33 CYS 34 VAL 35 PHE 36 SER 37 GLY 38 ARG 39 PHE 40 GLU 41 ASP 42 SER 43 GLY 44 ALA 45 VAL 46 ALA 47 THR 48 ALA 49 ASN 50 TYR 51 GLU 52 ALA 53 ARG 54 LYS 55 PHE 56 GLY 57 VAL 58 LYS 59 ALA 60 GLY 61 ILE 62 PRO 63 ILE 64 VAL 65 GLU 66 ALA 67 LYS 68 LYS 69 ILE 70 LEU 71 PRO 72 ASN 73 ALA 74 VAL 75 TYR 76 LEU 77 PRO 78 MET 79 ARG 80 LYS 81 GLU 82 VAL 83 TYR 84 GLN 85 GLN 86 VAL 87 SER 88 SER 89 ARG 90 ILE 91 MET 92 ASN 93 LEU 94 LEU 95 ARG 96 GLU 97 TYR 98 SER 99 GLU 100 LYS 101 ILE 102 GLU 103 ILE 104 ALA 105 SER 106 ILE 107 ASP 108 GLU 109 ALA 110 TYR 111 LEU 112 ASP 113 ILE 114 SER 115 ASP 116 LYS 117 VAL 118 ARG 119 ASP 120 TYR 121 ARG 122 GLU 123 ALA 124 TYR 125 ASN 126 LEU 127 GLY 128 LEU 129 GLU 130 ILE 131 LYS 132 ASN 133 LYS 134 ILE 135 LEU 136 GLU 137 LYS 138 GLU 139 LYS 140 ILE 141 THR 142 VAL 143 THR 144 VAL 145 GLY 146 ILE 147 SER 148 LYS 149 ASN 150 LYS 151 VAL 152 PHE 153 ALA 154 LYS 155 ILE 156 ALA 157 ALA 158 ASP 159 MET 160 ALA 161 LYS 162 PRO 163 ASN 164 GLY 165 ILE 166 LYS 167 VAL 168 ILE 169 ASP 170 ASP 171 GLU 172 GLU 173 VAL 174 LYS 175 ARG 176 LEU 177 ILE 178 ARG 179 GLU 180 LEU 181 ASP 182 ILE 183 ALA 184 ASP 185 VAL 186 PRO 187 GLY 188 ILE 189 GLY 190 ASN 191 ILE 192 THR 193 ALA 194 GLU 195 LYS 196 LEU 197 LYS 198 LYS 199 LEU 200 GLY 201 ILE 202 ASN 203 LYS 204 LEU 205 VAL 206 ASP 207 THR 208 LEU 209 SER 210 ILE 211 GLU 212 PHE 213 ASP 214 LYS 215 LEU 216 LYS 217 GLY 218 MET 219 ILE 220 GLY 221 GLU 222 ALA 223 LYS 224 ALA 225 LYS 226 TYR 227 LEU 228 ILE 229 SER 230 LEU 231 ALA 232 ARG 233 ASP 234 GLU 235 TYR 236 ASN 237 GLU 238 PRO 239 ILE 240 ARG 241 THR 242 ARG 243 VAL 244 ARG 245 LYS 246 SER 247 ILE 248 GLY 249 ARG 250 ILE 251 VAL 252 THR 253 MET 254 LYS 255 ARG 256 ASN 257 SER 258 ARG 259 ASN 260 LEU 261 GLU 262 GLU 263 ILE 264 LYS 265 PRO 266 TYR 267 LEU 268 PHE 269 ARG 270 ALA 271 ILE 272 GLU 273 GLU 274 SER 275 TYR 276 TYR 277 LYS 278 LEU 279 ASP 280 LYS 281 ARG 282 ILE 283 PRO 284 LYS 285 ALA 286 ILE 287 HIS 288 VAL 289 VAL 290 ALA 291 VAL 292 THR 293 GLU 294 ASP 295 LEU 296 ASP 297 ILE 298 VAL 299 SER 300 ARG 301 GLY 302 ARG 303 THR 304 PHE 305 PRO 306 HIS 307 GLY 308 ILE 309 SER 310 LYS 311 GLU 312 THR 313 ALA 314 TYR 315 SER 316 GLU 317 SER 318 VAL 319 LYS 320 LEU 321 LEU 322 GLN 323 LYS 324 ILE 325 LEU 326 GLU 327 GLU 328 ASP 329 GLU 330 ARG 331 LYS 332 ILE 333 ARG 334 ARG 335 ILE 336 GLY 337 VAL 338 ARG 339 PHE 340 SER 341 LYS 342 PHE 343 ILE 344

Unit 4

HIS 2 HIS 3 MET 4 ILE 5 VAL 6 LEU 7 PHE 8 VAL 9 ASP 10 PHE 11 ASP 12 TYR 13 PHE 14 TYR 15 ALA 16 GLN 17 VAL 18 GLU 19 GLU 20 VAL 21 LEU 22 ASN 23 PRO 24 SER 25 LEU 26 LYS 27 GLY 28 LYS 29 PRO 30 VAL 31 VAL 32 VAL 33 CYS 34 VAL 35 PHE 36 SER 37 GLY 38 ARG 39 PHE 40 GLU 41 ASP 42 SER 43 GLY 44 ALA 45 VAL 46 ALA 47 THR 48 ALA 49 ASN 50 TYR 51 GLU 52 ALA 53 ARG 54 LYS 55 PHE 56 GLY 57 VAL 58 LYS 59 ALA 60 GLY 61 ILE 62 PRO 63 ILE 64 VAL 65 GLU 66 ALA 67 LYS 68 LYS 69 ILE 70 LEU 71 PRO 72 ASN 73 ALA 74 VAL 75 TYR 76 LEU 77 PRO 78 MET 79 ARG 80 LYS 81 GLU 82 VAL 83 TYR 84 GLN 85 GLN 86 VAL 87 SER 88 SER 89 ARG 90 ILE 91 MET 92 ASN 93 LEU 94 LEU 95 ARG 96 GLU 97 TYR 98 SER 99 GLU 100 LYS 101 ILE 102 GLU 103 ILE 104 ALA 105 SER 106 ILE 107 ASP 108 GLU 109 ALA 110 TYR 111 LEU 112 ASP 113 ILE 114 SER 115 ASP 116 LYS 117 VAL 118 ARG 119 ASP 120 TYR 121 ARG 122 GLU 123 ALA 124 TYR 125 ASN 126 LEU 127 GLY 128 LEU 129 GLU 130 ILE 131 LYS 132 ASN 133 LYS 134 ILE 135 LEU 136 GLU 137 LYS 138 GLU 139 LYS 140 ILE 141 THR 142 VAL 143 THR 144 VAL 145 GLY 146 ILE 147 SER 148 LYS 149 ASN 150 LYS 151 VAL 152 PHE 153 ALA 154 LYS 155 ILE 156 ALA 157 ALA 158 ASP 159 MET 160 ALA 161 LYS 162 PRO 163 ASN 164 GLY 165 ILE 166 LYS 167 VAL 168 ILE 169 ASP 170 ASP 171 GLU 172 GLU 173 VAL 174 LYS 175 ARG 176 LEU 177 ILE 178 ARG 179 GLU 180 LEU 181 ASP 182 ILE 183 ALA 184 ASP 185 VAL 186 PRO 187 GLY 188 ILE 189 GLY 190 ASN 191 ILE 192 THR 193 ALA 194 GLU 195 LYS 196 LEU 197 LYS 198 LYS 199 LEU 200 GLY 201 ILE 202 ASN 203 LYS 204 LEU 205 VAL 206 ASP 207 THR 208 LEU 209 SER 210 ILE 211 GLU 212 PHE 213 ASP 214 LYS 215 LEU 216 LYS 217 GLY 218 MET 219 ILE 220 GLY 221 GLU 222 ALA 223 LYS 224 ALA 225 LYS 226 TYR 227 LEU 228 ILE 229 SER 230 LEU 231 ALA 232 ARG 233 ASP 234 GLU 235 TYR 236 ASN 237 GLU 238 PRO 239 ILE 240 ARG 241 THR 242 ARG 243 VAL 244 ARG 245 LYS 246 SER 247 ILE 248 GLY 249 ARG 250 ILE 251 VAL 252 THR 253 MET 254 LYS 255 ARG 256 ASN 257 SER 258 ARG 259 ASN 260 LEU 261 GLU 262 GLU 263 ILE 264 LYS 265 PRO 266 TYR 267 LEU 268 PHE 269 ARG 270 ALA 271 ILE 272 GLU 273 GLU 274 SER 275 TYR 276 TYR 277 LYS 278 LEU 279 ASP 280 LYS 281 ARG 282 ILE 283 PRO 284 LYS 285 ALA 286 ILE 287 HIS 288 VAL 289 VAL 290 ALA 291 VAL 292 THR 293 GLU 294 ASP 295 LEU 296 ASP 297 ILE 298 VAL 299 SER 300 ARG 301 GLY 302 ARG 303 THR 304 PHE 305 PRO 306 HIS 307 GLY 308 ILE 309 SER 310 LYS 311 GLU 312 THR 313 ALA 314 TYR 315 SER 316 GLU 317 SER 318 VAL 319 LYS 320 LEU 321 LEU 322 GLN 323 LYS 324 ILE 325 LEU 326 GLU 327 GLU 328 ASP 329 GLU 330 ARG 331 LYS 332 ILE 333 ARG 334 ARG 335 ILE 336 GLY 337 VAL 338 ARG 339 PHE 340 SER 341 LYS 342 PHE 343 ILE 344

Other macromolecules

Unit 2	DA 371 DT 372 DT 373 DG 374 DA 375 DA 376 DT 377 DC 378 DC 379 DT 380 DT 381 DC 382 DC 383 DC 384 DC 385 DC 386
Unit 3	DG 347 DG 348 DG 349 DG 350 DG 351 DA 352 DA 353 DG 354 DG 355 DA 356 DT 357 DT 358
Unit 5	DA 371 DT 372 DT 373 DG 374 DA 375 DA 376 DT 377 DC 378 DC 379 DT 380 DT 381 DC 382 DC 383 DC 384 DC 385 DC 386
Unit 6	DG 347 DG 348 DG 349 DG 350 DG 351 DA 352 DA 353 DG 354 DG 355 DA 356 DT 357 DT 358

Ligands

Unit 7	CA 345 DCP 400
Unit 8	AFN 387
Unit 9	CA 345 DCP 400
Unit 10	AFN 387