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Sequence, Chains, Asymmetric and Biological Units

Title NUCLEOSIDE DIPHOSPHATE KINASE B FROM TRYPANOSOMA CRUZI
Keywords NUCLEOSIDE DIPHOSPHATE KINASE B, TRYPANOSOMATIDS, ALPHA-BETA FOLD, TRANSFERASE, SECRETED
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3PRV     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  A 150 1156 0
2  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  B 151 1172 0
3  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  C 151 1170 0
4  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  D 150 1164 0
5  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  E 140 1071 0
6  Protein   NUCLEOSIDE DIPHOSPHATE KINASE  F 150 1133 0
7 Water     118 0 118
total       1010 6866 118

Proteins
Unit 1 THR2 SER3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 VAL10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 CYS18 LEU19 VAL20 GLY21 GLU22 ILE23 ILE24 GLN25 ARG26 PHE27 GLU28 LYS29 LYS30 GLY31 TYR32 LYS33 LEU34 VAL35 ALA36 LEU37 LYS38 MET39 LEU40 GLN41 PRO42 SER43 ALA44 GLU45 GLN46 ALA47 GLN48 GLN49 HIS50 TYR51 ILE52 ASP53 LEU54 ALA55 SER56 LYS57 PRO58 PHE59 TYR60 LYS61 ASP62 LEU63 VAL64 ALA65 TYR66 PHE67 SER68 SER69 GLY70 PRO71 ILE72 VAL73 GLY74 MET75 VAL76 TRP77 GLU78 GLY79 LYS80 GLY81 VAL82 VAL83 LYS84 GLY85 GLY86 ARG87 VAL88 LEU89 LEU90 GLY91 ALA92 THR93 ASN94 PRO95 ALA96 ASP97 SER98 LEU99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 PHE107 ALA108 VAL109 ASP110 VAL111 GLY112 ARG113 ASN114 VAL115 CYS116 HIS117 GLY118 SER119 ASP120 SER121 VAL122 ASP123 SER124 ALA125 LYS126 ARG127 GLU128 ILE129 ALA130 PHE131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 ASN140 TRP141 THR142 SER143 HIS144 SER145 VAL146 LYS147 GLN148 VAL149 TYR150 GLU151
Unit 2 MET1 THR2 SER3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 VAL10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 CYS18 LEU19 VAL20 GLY21 GLU22 ILE23 ILE24 GLN25 ARG26 PHE27 GLU28 LYS29 LYS30 GLY31 TYR32 LYS33 LEU34 VAL35 ALA36 LEU37 LYS38 MET39 LEU40 GLN41 PRO42 SER43 ALA44 GLU45 GLN46 ALA47 GLN48 GLN49 HIS50 TYR51 ILE52 ASP53 LEU54 ALA55 SER56 LYS57 PRO58 PHE59 TYR60 LYS61 ASP62 LEU63 VAL64 ALA65 TYR66 PHE67 SER68 SER69 GLY70 PRO71 ILE72 VAL73 GLY74 MET75 VAL76 TRP77 GLU78 GLY79 LYS80 GLY81 VAL82 VAL83 LYS84 GLY85 GLY86 ARG87 VAL88 LEU89 LEU90 GLY91 ALA92 THR93 ASN94 PRO95 ALA96 ASP97 SER98 LEU99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 PHE107 ALA108 VAL109 ASP110 VAL111 GLY112 ARG113 ASN114 VAL115 CYS116 HIS117 GLY118 SER119 ASP120 SER121 VAL122 ASP123 SER124 ALA125 LYS126 ARG127 GLU128 ILE129 ALA130 PHE131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 ASN140 TRP141 THR142 SER143 HIS144 SER145 VAL146 LYS147 GLN148 VAL149 TYR150 GLU151
Unit 3 MET1 THR2 SER3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 VAL10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 CYS18 LEU19 VAL20 GLY21 GLU22 ILE23 ILE24 GLN25 ARG26 PHE27 GLU28 LYS29 LYS30 GLY31 TYR32 LYS33 LEU34 VAL35 ALA36 LEU37 LYS38 MET39 LEU40 GLN41 PRO42 SER43 ALA44 GLU45 GLN46 ALA47 GLN48 GLN49 HIS50 TYR51 ILE52 ASP53 LEU54 ALA55 SER56 LYS57 PRO58 PHE59 TYR60 LYS61 ASP62 LEU63 VAL64 ALA65 TYR66 PHE67 SER68 SER69 GLY70 PRO71 ILE72 VAL73 GLY74 MET75 VAL76 TRP77 GLU78 GLY79 LYS80 GLY81 VAL82 VAL83 LYS84 GLY85 GLY86 ARG87 VAL88 LEU89 LEU90 GLY91 ALA92 THR93 ASN94 PRO95 ALA96 ASP97 SER98 LEU99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 PHE107 ALA108 VAL109 ASP110 VAL111 GLY112 ARG113 ASN114 VAL115 CYS116 HIS117 GLY118 SER119 ASP120 SER121 VAL122 ASP123 SER124 ALA125 LYS126 ARG127 GLU128 ILE129 ALA130 PHE131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 ASN140 TRP141 THR142 SER143 HIS144 SER145 VAL146 LYS147 GLN148 VAL149 TYR150 GLU151
Unit 4 THR2 SER3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 VAL10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 CYS18 LEU19 VAL20 GLY21 GLU22 ILE23 ILE24 GLN25 ARG26 PHE27 GLU28 LYS29 LYS30 GLY31 TYR32 LYS33 LEU34 VAL35 ALA36 LEU37 LYS38 MET39 LEU40 GLN41 PRO42 SER43 ALA44 GLU45 GLN46 ALA47 GLN48 GLN49 HIS50 TYR51 ILE52 ASP53 LEU54 ALA55 SER56 LYS57 PRO58 PHE59 TYR60 LYS61 ASP62 LEU63 VAL64 ALA65 TYR66 PHE67 SER68 SER69 GLY70 PRO71 ILE72 VAL73 GLY74 MET75 VAL76 TRP77 GLU78 GLY79 LYS80 GLY81 VAL82 VAL83 LYS84 GLY85 GLY86 ARG87 VAL88 LEU89 LEU90 GLY91 ALA92 THR93 ASN94 PRO95 ALA96 ASP97 SER98 LEU99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 PHE107 ALA108 VAL109 ASP110 VAL111 GLY112 ARG113 ASN114 VAL115 CYS116 HIS117 GLY118 SER119 ASP120 SER121 VAL122 ASP123 SER124 ALA125 LYS126 ARG127 GLU128 ILE129 ALA130 PHE131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 ASN140 TRP141 THR142 SER143 HIS144 SER145 VAL146 LYS147 GLN148 VAL149 TYR150 GLU151
Unit 5 THR2 SER3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 VAL10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 CYS18 LEU19 VAL20 GLY21 GLU22 ILE23 ILE24 GLN25 ARG26 PHE27 GLU28 LYS29 LYS30 GLY31 TYR32 LYS33 LEU34 VAL35 ALA36 LEU37 LYS38 MET39 LEU40 GLN41 PRO42 SER43 ALA44 GLU45 GLN46 ALA47 GLN48 GLN49 TYR60 LYS61 ASP62 LEU63 VAL64 ALA65 TYR66 PHE67 SER68 SER69 GLY70 PRO71 ILE72 VAL73 GLY74 MET75 VAL76 TRP77 GLU78 GLY79 LYS80 GLY81 VAL82 VAL83 LYS84 GLY85 GLY86 ARG87 VAL88 LEU89 LEU90 GLY91 ALA92 THR93 ASN94 PRO95 ALA96 ASP97 SER98 LEU99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 PHE107 ALA108 VAL109 ASP110 VAL111 GLY112 ARG113 ASN114 VAL115 CYS116 HIS117 GLY118 SER119 ASP120 SER121 VAL122 ASP123 SER124 ALA125 LYS126 ARG127 GLU128 ILE129 ALA130 PHE131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 ASN140 TRP141 THR142 SER143 HIS144 SER145 VAL146 LYS147 GLN148 VAL149 TYR150 GLU151
Unit 6 THR2 SER3 GLU4 ARG5 THR6 PHE7 ILE8 ALA9 VAL10 LYS11 PRO12 ASP13 GLY14 VAL15 GLN16 ARG17 CYS18 LEU19 VAL20 GLY21 GLU22 ILE23 ILE24 GLN25 ARG26 PHE27 GLU28 LYS29 LYS30 GLY31 TYR32 LYS33 LEU34 VAL35 ALA36 LEU37 LYS38 MET39 LEU40 GLN41 PRO42 SER43 ALA44 GLU45 GLN46 ALA47 GLN48 GLN49 HIS50 TYR51 ILE52 ASP53 LEU54 ALA55 SER56 LYS57 PRO58 PHE59 TYR60 LYS61 ASP62 LEU63 VAL64 ALA65 TYR66 PHE67 SER68 SER69 GLY70 PRO71 ILE72 VAL73 GLY74 MET75 VAL76 TRP77 GLU78 GLY79 LYS80 GLY81 VAL82 VAL83 LYS84 GLY85 GLY86 ARG87 VAL88 LEU89 LEU90 GLY91 ALA92 THR93 ASN94 PRO95 ALA96 ASP97 SER98 LEU99 PRO100 GLY101 THR102 ILE103 ARG104 GLY105 ASP106 PHE107 ALA108 VAL109 ASP110 VAL111 GLY112 ARG113 ASN114 VAL115 CYS116 HIS117 GLY118 SER119 ASP120 SER121 VAL122 ASP123 SER124 ALA125 LYS126 ARG127 GLU128 ILE129 ALA130 PHE131 TRP132 PHE133 LYS134 PRO135 GLU136 GLU137 LEU138 VAL139 ASN140 TRP141 THR142 SER143 HIS144 SER145 VAL146 LYS147 GLN148 VAL149 TYR150 GLU151

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany