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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHA DEHYDROGENASE FROM BACILLUS HALODURANS C-125
Keywords STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, DEHYDROGE PSI-BIOLOGY, NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTI NYSGRC, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3PRL     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 475 3573 0
2  Protein    B 476 3578 0
3  Protein    C 475 3573 0
4  Protein    D 480 3615 0
5  Ligand    A 1 0 5
6  Ligand    B 1 0 5
7  Ligand    C 2 0 10
8 Water     553 0 553
total       2463 14339 573
Proteins
Unit 1 GLN9 PHE10 ASN11 ALA12 ASN13 ILE14 LEU15 ARG16 ASN17 GLY18 GLU19 TRP20 VAL21 GLU22 SER23 ARG24 THR25 GLY26 GLU27 ARG28 ILE29 SER30 ILE31 SER32 ALA33 PRO34 ALA35 SER36 GLY37 VAL38 ALA39 LEU40 GLY41 SER42 ILE43 PRO44 ALA45 LEU46 SER47 GLN48 GLU49 GLU50 VAL51 ASN52 ASP53 ALA54 ILE55 GLN56 GLY57 ALA58 LYS59 ASP60 ALA61 GLN62 LYS63 ILE64 TRP65 LYS66 ILE67 ARG68 PRO69 ILE70 HIS71 GLU72 ARG73 VAL74 ASP75 LEU76 LEU77 TYR78 ALA79 TRP80 ALA81 ASP82 LEU83 LEU84 GLU85 GLU86 ARG87 LYS88 GLU89 ILE90 ILE91 GLY92 GLU93 LEU94 ILE95 MET96 HIS97 GLU98 VAL99 ALA100 LYS101 PRO102 LYS103 LYS104 SER105 ALA106 ILE107 GLY108 GLU109 VAL110 SER111 ARG112 THR113 ALA114 ASP115 ILE116 ILE117 ARG118 HIS119 THR120 ALA121 ASP122 GLU123 ALA124 LEU125 ARG126 LEU127 ASN128 GLY129 GLU130 THR131 LEU132 LYS133 GLY134 ASP135 GLN136 PHE137 LYS138 GLY139 GLY140 SER141 SER142 LYS143 LYS144 ILE145 ALA146 LEU147 VAL148 GLU149 ARG150 GLU151 PRO152 LEU153 GLY154 VAL155 VAL156 LEU157 ALA158 ILE159 SER160 PRO161 PHE162 ASN163 TYR164 PRO165 VAL166 ASN167 LEU168 ALA169 ALA170 ALA171 LYS172 ILE173 ALA174 PRO175 ALA176 LEU177 VAL178 THR179 GLY180 ASN181 THR182 VAL183 VAL184 PHE185 LYS186 PRO187 ALA188 THR189 GLN190 GLY191 SER192 LEU193 SER194 GLY195 ILE196 LYS197 MET198 VAL199 GLU200 ALA201 LEU202 ALA203 ASP204 ALA205 GLY206 ALA207 PRO208 GLU209 GLY210 ILE211 ILE212 GLN213 VAL214 VAL215 THR216 GLY217 ARG218 GLY219 SER220 VAL221 ILE222 GLY223 ASP224 HIS225 LEU226 VAL227 GLU228 HIS229 PRO230 GLY231 ILE232 ASP233 MET234 ILE235 THR236 PHE237 THR238 GLY239 GLY240 THR241 THR242 THR243 GLY244 GLU245 ARG246 ILE247 SER248 GLU249 LYS250 ALA251 LYS252 MET253 ILE254 PRO255 VAL256 VAL257 LEU258 GLU259 LEU260 GLY261 GLY262 LYS263 ASP264 PRO265 ALA266 ILE267 VAL268 LEU269 ASP270 ASP271 ALA272 ASP273 LEU274 LYS275 LEU276 THR277 ALA278 SER279 GLN280 ILE281 VAL282 SER283 GLY284 ALA285 PHE286 SER287 TYR288 SER289 GLY290 GLN291 ARG292 CYS293 THR294 ALA295 ILE296 LYS297 ARG298 VAL299 PHE300 VAL301 GLN302 ASP303 SER304 VAL305 ALA306 ASP307 GLN308 LEU309 VAL310 ALA311 ASN312 ILE313 LYS314 GLU315 LEU316 VAL317 GLU318 GLN319 LEU320 THR321 VAL322 GLY323 SER324 PRO325 GLU326 ASP327 ASP328 ALA329 ASP330 ILE331 THR332 PRO333 VAL334 ILE335 ASP336 GLU337 LYS338 SER339 ALA340 ALA341 PHE342 ILE343 GLN344 GLY345 LEU346 ILE347 ASP348 ASP349 ALA350 LEU351 GLU352 ASN353 GLY354 ALA355 THR356 LEU357 LEU358 SER359 GLY360 ASN361 LYS362 ARG363 GLN364 GLY365 ASN366 LEU367 LEU368 SER369 PRO370 THR371 LEU372 LEU373 ASP374 ASP375 VAL376 THR377 PRO378 ALA379 MET380 ARG381 VAL382 ALA383 TRP384 GLU385 GLU386 PRO387 PHE388 GLY389 PRO390 VAL391 LEU392 PRO393 ILE394 ILE395 ARG396 VAL397 LYS398 ASP399 ALA400 ASN401 GLU402 ALA403 ILE404 SER405 LEU406 SER407 ASN408 GLN409 SER410 ASP411 TYR412 GLY413 LEU414 GLN415 ALA416 SER417 ILE418 PHE419 THR420 LYS421 ASP422 THR423 ASP424 ARG425 ALA426 ILE427 ASN428 ILE429 GLY430 LYS431 HIS432 LEU433 GLU434 VAL435 GLY436 THR437 VAL438 HIS439 ILE440 ASN441 ALA442 LYS443 THR444 GLU445 ARG446 GLY447 PRO448 ASP449 HIS450 PHE451 PRO452 PHE453 LEU454 GLY455 VAL456 LYS457 LYS458 SER459 GLY460 LEU461 GLY462 VAL463 GLN464 GLY465 ILE466 LYS467 PRO468 SER469 LEU470 LEU471 SER472 MET473 THR474 ARG475 GLU476 ARG477 VAL478 THR479 VAL480 LEU481 ASN482 LEU483
Unit 2 GLN9 PHE10 ASN11 ALA12 ASN13 ILE14 LEU15 ARG16 ASN17 GLY18 GLU19 TRP20 VAL21 GLU22 SER23 ARG24 THR25 GLY26 GLU27 ARG28 ILE29 SER30 ILE31 SER32 ALA33 PRO34 ALA35 SER36 GLY37 VAL38 ALA39 LEU40 GLY41 SER42 ILE43 PRO44 ALA45 LEU46 SER47 GLN48 GLU49 GLU50 VAL51 ASN52 ASP53 ALA54 ILE55 GLN56 GLY57 ALA58 LYS59 ASP60 ALA61 GLN62 LYS63 ILE64 TRP65 LYS66 ILE67 ARG68 PRO69 ILE70 HIS71 GLU72 ARG73 VAL74 ASP75 LEU76 LEU77 TYR78 ALA79 TRP80 ALA81 ASP82 LEU83 LEU84 GLU85 GLU86 ARG87 LYS88 GLU89 ILE90 ILE91 GLY92 GLU93 LEU94 ILE95 MET96 HIS97 GLU98 VAL99 ALA100 LYS101 PRO102 LYS103 LYS104 SER105 ALA106 ILE107 GLY108 GLU109 VAL110 SER111 ARG112 THR113 ALA114 ASP115 ILE116 ILE117 ARG118 HIS119 THR120 ALA121 ASP122 GLU123 ALA124 LEU125 ARG126 LEU127 ASN128 GLY129 GLU130 THR131 LEU132 LYS133 GLY134 ASP135 GLN136 PHE137 LYS138 GLY139 GLY140 SER141 SER142 LYS143 LYS144 ILE145 ALA146 LEU147 VAL148 GLU149 ARG150 GLU151 PRO152 LEU153 GLY154 VAL155 VAL156 LEU157 ALA158 ILE159 SER160 PRO161 PHE162 ASN163 TYR164 PRO165 VAL166 ASN167 LEU168 ALA169 ALA170 ALA171 LYS172 ILE173 ALA174 PRO175 ALA176 LEU177 VAL178 THR179 GLY180 ASN181 THR182 VAL183 VAL184 PHE185 LYS186 PRO187 ALA188 THR189 GLN190 GLY191 SER192 LEU193 SER194 GLY195 ILE196 LYS197 MET198 VAL199 GLU200 ALA201 LEU202 ALA203 ASP204 ALA205 GLY206 ALA207 PRO208 GLU209 GLY210 ILE211 ILE212 GLN213 VAL214 VAL215 THR216 GLY217 ARG218 GLY219 SER220 VAL221 ILE222 GLY223 ASP224 HIS225 LEU226 VAL227 GLU228 HIS229 PRO230 GLY231 ILE232 ASP233 MET234 ILE235 THR236 PHE237 THR238 GLY239 GLY240 THR241 THR242 THR243 GLY244 GLU245 ARG246 ILE247 SER248 GLU249 LYS250 ALA251 LYS252 MET253 ILE254 PRO255 VAL256 VAL257 LEU258 GLU259 LEU260 GLY261 GLY262 LYS263 ASP264 PRO265 ALA266 ILE267 VAL268 LEU269 ASP270 ASP271 ALA272 ASP273 LEU274 LYS275 LEU276 THR277 ALA278 SER279 GLN280 ILE281 VAL282 SER283 GLY284 ALA285 PHE286 SER287 TYR288 SER289 GLY290 GLN291 ARG292 CYS293 THR294 ALA295 ILE296 LYS297 ARG298 VAL299 PHE300 VAL301 GLN302 ASP303 SER304 VAL305 ALA306 ASP307 GLN308 LEU309 VAL310 ALA311 ASN312 ILE313 LYS314 GLU315 LEU316 VAL317 GLU318 GLN319 LEU320 THR321 VAL322 GLY323 SER324 PRO325 GLU326 ASP327 ASP328 ALA329 ASP330 ILE331 THR332 PRO333 VAL334 ILE335 ASP336 GLU337 LYS338 SER339 ALA340 ALA341 PHE342 ILE343 GLN344 GLY345 LEU346 ILE347 ASP348 ASP349 ALA350 LEU351 GLU352 ASN353 GLY354 ALA355 THR356 LEU357 LEU358 SER359 GLY360 ASN361 LYS362 ARG363 GLN364 GLY365 ASN366 LEU367 LEU368 SER369 PRO370 THR371 LEU372 LEU373 ASP374 ASP375 VAL376 THR377 PRO378 ALA379 MET380 ARG381 VAL382 ALA383 TRP384 GLU385 GLU386 PRO387 PHE388 GLY389 PRO390 VAL391 LEU392 PRO393 ILE394 ILE395 ARG396 VAL397 LYS398 ASP399 ALA400 ASN401 GLU402 ALA403 ILE404 SER405 LEU406 SER407 ASN408 GLN409 SER410 ASP411 TYR412 GLY413 LEU414 GLN415 ALA416 SER417 ILE418 PHE419 THR420 LYS421 ASP422 THR423 ASP424 ARG425 ALA426 ILE427 ASN428 ILE429 GLY430 LYS431 HIS432 LEU433 GLU434 VAL435 GLY436 THR437 VAL438 HIS439 ILE440 ASN441 ALA442 LYS443 THR444 GLU445 ARG446 GLY447 PRO448 ASP449 HIS450 PHE451 PRO452 PHE453 LEU454 GLY455 VAL456 LYS457 LYS458 SER459 GLY460 LEU461 GLY462 VAL463 GLN464 GLY465 ILE466 LYS467 PRO468 SER469 LEU470 LEU471 SER472 MET473 THR474 ARG475 GLU476 ARG477 VAL478 THR479 VAL480 LEU481 ASN482 LEU483 ALA484
Unit 3 GLN9 PHE10 ASN11 ALA12 ASN13 ILE14 LEU15 ARG16 ASN17 GLY18 GLU19 TRP20 VAL21 GLU22 SER23 ARG24 THR25 GLY26 GLU27 ARG28 ILE29 SER30 ILE31 SER32 ALA33 PRO34 ALA35 SER36 GLY37 VAL38 ALA39 LEU40 GLY41 SER42 ILE43 PRO44 ALA45 LEU46 SER47 GLN48 GLU49 GLU50 VAL51 ASN52 ASP53 ALA54 ILE55 GLN56 GLY57 ALA58 LYS59 ASP60 ALA61 GLN62 LYS63 ILE64 TRP65 LYS66 ILE67 ARG68 PRO69 ILE70 HIS71 GLU72 ARG73 VAL74 ASP75 LEU76 LEU77 TYR78 ALA79 TRP80 ALA81 ASP82 LEU83 LEU84 GLU85 GLU86 ARG87 LYS88 GLU89 ILE90 ILE91 GLY92 GLU93 LEU94 ILE95 MET96 HIS97 GLU98 VAL99 ALA100 LYS101 PRO102 LYS103 LYS104 SER105 ALA106 ILE107 GLY108 GLU109 VAL110 SER111 ARG112 THR113 ALA114 ASP115 ILE116 ILE117 ARG118 HIS119 THR120 ALA121 ASP122 GLU123 ALA124 LEU125 ARG126 LEU127 ASN128 GLY129 GLU130 THR131 LEU132 LYS133 GLY134 ASP135 GLN136 PHE137 LYS138 GLY139 GLY140 SER141 SER142 LYS143 LYS144 ILE145 ALA146 LEU147 VAL148 GLU149 ARG150 GLU151 PRO152 LEU153 GLY154 VAL155 VAL156 LEU157 ALA158 ILE159 SER160 PRO161 PHE162 ASN163 TYR164 PRO165 VAL166 ASN167 LEU168 ALA169 ALA170 ALA171 LYS172 ILE173 ALA174 PRO175 ALA176 LEU177 VAL178 THR179 GLY180 ASN181 THR182 VAL183 VAL184 PHE185 LYS186 PRO187 ALA188 THR189 GLN190 GLY191 SER192 LEU193 SER194 GLY195 ILE196 LYS197 MET198 VAL199 GLU200 ALA201 LEU202 ALA203 ASP204 ALA205 GLY206 ALA207 PRO208 GLU209 GLY210 ILE211 ILE212 GLN213 VAL214 VAL215 THR216 GLY217 ARG218 GLY219 SER220 VAL221 ILE222 GLY223 ASP224 HIS225 LEU226 VAL227 GLU228 HIS229 PRO230 GLY231 ILE232 ASP233 MET234 ILE235 THR236 PHE237 THR238 GLY239 GLY240 THR241 THR242 THR243 GLY244 GLU245 ARG246 ILE247 SER248 GLU249 LYS250 ALA251 LYS252 MET253 ILE254 PRO255 VAL256 VAL257 LEU258 GLU259 LEU260 GLY261 GLY262 LYS263 ASP264 PRO265 ALA266 ILE267 VAL268 LEU269 ASP270 ASP271 ALA272 ASP273 LEU274 LYS275 LEU276 THR277 ALA278 SER279 GLN280 ILE281 VAL282 SER283 GLY284 ALA285 PHE286 SER287 TYR288 SER289 GLY290 GLN291 ARG292 CYS293 THR294 ALA295 ILE296 LYS297 ARG298 VAL299 PHE300 VAL301 GLN302 ASP303 SER304 VAL305 ALA306 ASP307 GLN308 LEU309 VAL310 ALA311 ASN312 ILE313 LYS314 GLU315 LEU316 VAL317 GLU318 GLN319 LEU320 THR321 VAL322 GLY323 SER324 PRO325 GLU326 ASP327 ASP328 ALA329 ASP330 ILE331 THR332 PRO333 VAL334 ILE335 ASP336 GLU337 LYS338 SER339 ALA340 ALA341 PHE342 ILE343 GLN344 GLY345 LEU346 ILE347 ASP348 ASP349 ALA350 LEU351 GLU352 ASN353 GLY354 ALA355 THR356 LEU357 LEU358 SER359 GLY360 ASN361 LYS362 ARG363 GLN364 GLY365 ASN366 LEU367 LEU368 SER369 PRO370 THR371 LEU372 LEU373 ASP374 ASP375 VAL376 THR377 PRO378 ALA379 MET380 ARG381 VAL382 ALA383 TRP384 GLU385 GLU386 PRO387 PHE388 GLY389 PRO390 VAL391 LEU392 PRO393 ILE394 ILE395 ARG396 VAL397 LYS398 ASP399 ALA400 ASN401 GLU402 ALA403 ILE404 SER405 LEU406 SER407 ASN408 GLN409 SER410 ASP411 TYR412 GLY413 LEU414 GLN415 ALA416 SER417 ILE418 PHE419 THR420 LYS421 ASP422 THR423 ASP424 ARG425 ALA426 ILE427 ASN428 ILE429 GLY430 LYS431 HIS432 LEU433 GLU434 VAL435 GLY436 THR437 VAL438 HIS439 ILE440 ASN441 ALA442 LYS443 THR444 GLU445 ARG446 GLY447 PRO448 ASP449 HIS450 PHE451 PRO452 PHE453 LEU454 GLY455 VAL456 LYS457 LYS458 SER459 GLY460 LEU461 GLY462 VAL463 GLN464 GLY465 ILE466 LYS467 PRO468 SER469 LEU470 LEU471 SER472 MET473 THR474 ARG475 GLU476 ARG477 VAL478 THR479 VAL480 LEU481 ASN482 LEU483
Unit 4 GLN9 PHE10 ASN11 ALA12 ASN13 ILE14 LEU15 ARG16 ASN17 GLY18 GLU19 TRP20 VAL21 GLU22 SER23 ARG24 THR25 GLY26 GLU27 ARG28 ILE29 SER30 ILE31 SER32 ALA33 PRO34 ALA35 SER36 GLY37 VAL38 ALA39 LEU40 GLY41 SER42 ILE43 PRO44 ALA45 LEU46 SER47 GLN48 GLU49 GLU50 VAL51 ASN52 ASP53 ALA54 ILE55 GLN56 GLY57 ALA58 LYS59 ASP60 ALA61 GLN62 LYS63 ILE64 TRP65 LYS66 ILE67 ARG68 PRO69 ILE70 HIS71 GLU72 ARG73 VAL74 ASP75 LEU76 LEU77 TYR78 ALA79 TRP80 ALA81 ASP82 LEU83 LEU84 GLU85 GLU86 ARG87 LYS88 GLU89 ILE90 ILE91 GLY92 GLU93 LEU94 ILE95 MET96 HIS97 GLU98 VAL99 ALA100 LYS101 PRO102 LYS103 LYS104 SER105 ALA106 ILE107 GLY108 GLU109 VAL110 SER111 ARG112 THR113 ALA114 ASP115 ILE116 ILE117 ARG118 HIS119 THR120 ALA121 ASP122 GLU123 ALA124 LEU125 ARG126 LEU127 ASN128 GLY129 GLU130 THR131 LEU132 LYS133 GLY134 ASP135 GLN136 PHE137 LYS138 GLY139 GLY140 SER141 SER142 LYS143 LYS144 ILE145 ALA146 LEU147 VAL148 GLU149 ARG150 GLU151 PRO152 LEU153 GLY154 VAL155 VAL156 LEU157 ALA158 ILE159 SER160 PRO161 PHE162 ASN163 TYR164 PRO165 VAL166 ASN167 LEU168 ALA169 ALA170 ALA171 LYS172 ILE173 ALA174 PRO175 ALA176 LEU177 VAL178 THR179 GLY180 ASN181 THR182 VAL183 VAL184 PHE185 LYS186 PRO187 ALA188 THR189 GLN190 GLY191 SER192 LEU193 SER194 GLY195 ILE196 LYS197 MET198 VAL199 GLU200 ALA201 LEU202 ALA203 ASP204 ALA205 GLY206 ALA207 PRO208 GLU209 GLY210 ILE211 ILE212 GLN213 VAL214 VAL215 THR216 GLY217 ARG218 GLY219 SER220 VAL221 ILE222 GLY223 ASP224 HIS225 LEU226 VAL227 GLU228 HIS229 PRO230 GLY231 ILE232 ASP233 MET234 ILE235 THR236 PHE237 THR238 GLY239 GLY240 THR241 THR242 THR243 GLY244 GLU245 ARG246 ILE247 SER248 GLU249 LYS250 ALA251 LYS252 MET253 ILE254 PRO255 VAL256 VAL257 LEU258 GLU259 LEU260 GLY261 GLY262 LYS263 ASP264 PRO265 ALA266 ILE267 VAL268 LEU269 ASP270 ASP271 ALA272 ASP273 LEU274 LYS275 LEU276 THR277 ALA278 SER279 GLN280 ILE281 VAL282 SER283 GLY284 ALA285 PHE286 SER287 TYR288 SER289 GLY290 GLN291 ARG292 CYS293 THR294 ALA295 ILE296 LYS297 ARG298 VAL299 PHE300 VAL301 GLN302 ASP303 SER304 VAL305 ALA306 ASP307 GLN308 LEU309 VAL310 ALA311 ASN312 ILE313 LYS314 GLU315 LEU316 VAL317 GLU318 GLN319 LEU320 THR321 VAL322 GLY323 SER324 PRO325 GLU326 ASP327 ASP328 ALA329 ASP330 ILE331 THR332 PRO333 VAL334 ILE335 ASP336 GLU337 LYS338 SER339 ALA340 ALA341 PHE342 ILE343 GLN344 GLY345 LEU346 ILE347 ASP348 ASP349 ALA350 LEU351 GLU352 ASN353 GLY354 ALA355 THR356 LEU357 LEU358 SER359 GLY360 ASN361 LYS362 ARG363 GLN364 GLY365 ASN366 LEU367 LEU368 SER369 PRO370 THR371 LEU372 LEU373 ASP374 ASP375 VAL376 THR377 PRO378 ALA379 MET380 ARG381 VAL382 ALA383 TRP384 GLU385 GLU386 PRO387 PHE388 GLY389 PRO390 VAL391 LEU392 PRO393 ILE394 ILE395 ARG396 VAL397 LYS398 ASP399 ALA400 ASN401 GLU402 ALA403 ILE404 SER405 LEU406 SER407 ASN408 GLN409 SER410 ASP411 TYR412 GLY413 LEU414 GLN415 ALA416 SER417 ILE418 PHE419 THR420 LYS421 ASP422 THR423 ASP424 ARG425 ALA426 ILE427 ASN428 ILE429 GLY430 LYS431 HIS432 LEU433 GLU434 VAL435 GLY436 THR437 VAL438 HIS439 ILE440 ASN441 ALA442 LYS443 THR444 GLU445 ARG446 GLY447 PRO448 ASP449 HIS450 PHE451 PRO452 PHE453 LEU454 GLY455 VAL456 LYS457 LYS458 SER459 GLY460 LEU461 GLY462 VAL463 GLN464 GLY465 ILE466 LYS467 PRO468 SER469 LEU470 LEU471 SER472 MET473 THR474 ARG475 GLU476 ARG477 VAL478 THR479 VAL480 LEU481 ASN482 LEU483 ALA484 GLU485 ASN486 LEU487 TYR488
Ligands
Unit 5 SO4506
Unit 6 SO4506
Unit 7 SO4506 SO4507
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany