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Sequence, Chains, Asymmetric and Biological Units

Title FAD BINDING BY APBE PROTEIN FROM SALMONELLA ENTERICA: A NEW FAD BINDING PROTEINS
Keywords APBE, FAD, FLAVOPROTEIN, OXIDOREDUCTASE, FAD BINDING DOMAIN, PROTEIN BINDING
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3PND     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE  A 317 2437 0
2  Protein   THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE  B 309 2377 0
3  Protein   THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE  C 323 2476 0
4  Protein   THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE  D 310 2384 0
5  Ligand   THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE  A 14 0 118
6  Ligand   THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE  B 13 0 113
7  Ligand   THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE  C 12 0 108
8  Ligand   THIAMINE BIOSYNTHESIS LIPOPROTEIN APBE  D 9 0 93
9 Water     329 0 329
total       1636 9674 761
Proteins
Unit 1 ALA32 ALA33 GLN34 VAL35 LEU36 GLU37 GLY38 LYS39 THR40 MET41 GLY42 THR43 LEU44 TRP45 ARG46 VAL47 SER48 VAL49 VAL50 GLY51 ILE52 ASP53 ALA54 LYS55 ARG56 ALA57 ALA58 GLU59 LEU60 GLN61 THR62 LYS63 ILE64 GLN65 THR66 GLN67 LEU68 ASP69 ALA70 ASP71 ASP72 TRP73 LEU74 LEU75 SER76 THR77 TYR78 LYS79 ASN80 ASP81 SER82 ALA83 LEU84 MET85 ARG86 PHE87 ASN88 HIS89 SER90 ARG91 SER92 LEU93 ALA94 PRO95 TRP96 PRO97 VAL98 SER99 GLU100 ALA101 MET102 ALA103 ASP104 ILE105 VAL106 THR107 SER108 ALA109 LEU110 ARG111 ILE112 GLY113 ALA114 LYS115 THR116 ASP117 GLY118 ALA119 MET120 ASP121 ILE122 THR123 VAL124 GLY125 PRO126 LEU127 VAL128 ASN129 LEU130 TRP131 GLY132 PHE133 GLY134 PRO135 ASP136 ARG137 GLN138 PRO139 LEU140 HIS141 ILE142 PRO143 THR144 PRO145 ALA146 GLN147 ILE148 ASP149 ALA150 ALA151 LYS152 ALA153 LYS154 THR155 GLY156 LEU157 GLN158 HIS159 LEU160 GLN161 VAL162 ILE163 ASP164 ARG165 ALA166 GLY167 HIS168 GLN169 PHE170 LEU171 GLN172 LYS173 ASP174 LEU175 PRO176 ASP177 LEU178 TYR179 VAL180 ASP181 LEU182 SER183 THR184 VAL185 GLY186 GLU187 GLY188 TYR189 ALA190 ALA191 ASP192 HIS193 LEU194 ALA195 ARG196 LEU197 MET198 GLU199 GLN200 GLU201 GLY202 ILE203 ALA204 ARG205 TYR206 LEU207 VAL208 SER209 VAL210 GLY211 GLY212 ALA213 LEU214 SER215 SER216 ARG217 GLY218 MET219 ASN220 ALA221 GLN222 GLY223 GLN224 PRO225 TRP226 ARG227 VAL228 ALA229 ILE230 GLN231 LYS232 PRO233 THR234 ASP235 ARG236 GLU237 ASN238 ALA239 VAL240 GLN241 ALA242 ILE243 VAL244 ASP245 ILE246 ASN247 GLY248 HIS249 GLY250 ILE251 SER252 THR253 SER254 GLY255 SER256 TYR257 ARG258 ASN259 TYR260 TYR261 GLU262 LEU263 ASP264 GLY265 LYS266 ARG267 VAL268 SER269 HIS270 VAL271 ILE272 ASP273 PRO274 GLN275 THR276 GLY277 ARG278 PRO279 ILE280 GLU281 HIS282 ASN283 LEU284 VAL285 SER286 VAL287 THR288 VAL289 ILE290 ALA291 PRO292 THR293 ALA294 LEU295 GLU296 ALA297 ASP298 GLY299 TRP300 ASP301 THR302 GLY303 LEU304 MET305 VAL306 LEU307 GLY308 THR309 GLN310 LYS311 ALA312 GLN313 GLU314 VAL315 VAL316 ARG317 ARG318 GLU319 GLY320 LEU321 ALA322 VAL323 PHE324 MET325 ILE326 MET327 LYS328 GLU329 GLY330 GLU331 GLY332 PHE333 LYS334 THR335 TRP336 MET337 SER338 PRO339 GLN340 PHE341 LYS342 THR343 PHE344 LEU345 VAL346 SER347 ASP348
Unit 2 ALA33 GLN34 VAL35 LEU36 GLU37 GLY38 LYS39 THR40 MET41 GLY42 THR43 LEU44 TRP45 ARG46 VAL47 SER48 VAL49 VAL50 GLY51 ILE52 ASP53 ALA54 LYS55 ARG56 ALA57 ALA58 GLU59 LEU60 GLN61 THR62 LYS63 ILE64 GLN65 THR66 GLN67 LEU68 ASP69 ALA70 ASP71 ASP72 TRP73 LEU74 LEU75 SER76 THR77 TYR78 LYS79 ASN80 ASP81 SER82 ALA83 LEU84 MET85 ARG86 PHE87 ASN88 HIS89 SER90 ARG91 SER92 LEU93 ALA94 PRO95 TRP96 PRO97 VAL98 SER99 GLU100 ALA101 MET102 ALA103 ASP104 ILE105 VAL106 THR107 SER108 ALA109 LEU110 ARG111 ILE112 GLY113 ALA114 LYS115 THR116 ASP117 GLY118 ALA119 MET120 ASP121 ILE122 THR123 VAL124 GLY125 PRO126 LEU127 VAL128 ASN129 LEU130 TRP131 GLY132 PHE133 GLY134 PRO135 ASP136 ARG137 GLN138 PRO139 LEU140 HIS141 ILE142 PRO143 THR144 PRO145 ALA146 GLN147 ILE148 ASP149 ALA150 ALA151 LYS152 ALA153 LYS154 THR155 GLY156 LEU157 GLN158 HIS159 LEU160 GLN161 VAL162 ILE163 ASP164 ARG165 ALA166 GLY167 HIS168 GLN169 PHE170 LEU171 GLN172 LYS173 ASP174 LEU175 PRO176 ASP177 LEU178 TYR179 VAL180 ASP181 LEU182 SER183 THR184 VAL185 GLY186 GLU187 GLY188 TYR189 ALA190 ALA191 ASP192 HIS193 LEU194 ALA195 ARG196 LEU197 MET198 GLU199 GLN200 GLU201 GLY202 ILE203 ALA204 ARG205 TYR206 LEU207 VAL208 SER209 VAL210 GLY211 GLY212 ALA213 LEU214 SER215 SER216 ARG217 GLY218 MET219 ASN220 ALA221 GLN222 GLY223 GLN224 PRO225 TRP226 ARG227 VAL228 ALA229 ILE230 GLN231 LYS232 PRO233 GLN241 ALA242 ILE243 VAL244 ASP245 ILE246 ASN247 GLY248 HIS249 GLY250 ILE251 SER252 THR253 SER254 GLY255 SER256 TYR257 ARG258 ASN259 TYR260 TYR261 GLU262 LEU263 ASP264 GLY265 LYS266 ARG267 VAL268 SER269 HIS270 VAL271 ILE272 ASP273 PRO274 GLN275 THR276 GLY277 ARG278 PRO279 ILE280 GLU281 HIS282 ASN283 LEU284 VAL285 SER286 VAL287 THR288 VAL289 ILE290 ALA291 PRO292 THR293 ALA294 LEU295 GLU296 ALA297 ASP298 GLY299 TRP300 ASP301 THR302 GLY303 LEU304 MET305 VAL306 LEU307 GLY308 THR309 GLN310 LYS311 ALA312 GLN313 GLU314 VAL315 VAL316 ARG317 ARG318 GLU319 GLY320 LEU321 ALA322 VAL323 PHE324 MET325 ILE326 MET327 LYS328 GLU329 GLY330 GLU331 GLY332 PHE333 LYS334 THR335 TRP336 MET337 SER338 PRO339 GLN340 PHE341 LYS342 THR343 PHE344 LEU345 VAL346 SER347 ASP348
Unit 3 THR26 THR27 THR28 ALA29 SER30 PRO31 ALA32 ALA33 GLN34 VAL35 LEU36 GLU37 GLY38 LYS39 THR40 MET41 GLY42 THR43 LEU44 TRP45 ARG46 VAL47 SER48 VAL49 VAL50 GLY51 ILE52 ASP53 ALA54 LYS55 ARG56 ALA57 ALA58 GLU59 LEU60 GLN61 THR62 LYS63 ILE64 GLN65 THR66 GLN67 LEU68 ASP69 ALA70 ASP71 ASP72 TRP73 LEU74 LEU75 SER76 THR77 TYR78 LYS79 ASN80 ASP81 SER82 ALA83 LEU84 MET85 ARG86 PHE87 ASN88 HIS89 SER90 ARG91 SER92 LEU93 ALA94 PRO95 TRP96 PRO97 VAL98 SER99 GLU100 ALA101 MET102 ALA103 ASP104 ILE105 VAL106 THR107 SER108 ALA109 LEU110 ARG111 ILE112 GLY113 ALA114 LYS115 THR116 ASP117 GLY118 ALA119 MET120 ASP121 ILE122 THR123 VAL124 GLY125 PRO126 LEU127 VAL128 ASN129 LEU130 TRP131 GLY132 PHE133 GLY134 PRO135 ASP136 ARG137 GLN138 PRO139 LEU140 HIS141 ILE142 PRO143 THR144 PRO145 ALA146 GLN147 ILE148 ASP149 ALA150 ALA151 LYS152 ALA153 LYS154 THR155 GLY156 LEU157 GLN158 HIS159 LEU160 GLN161 VAL162 ILE163 ASP164 ARG165 ALA166 GLY167 HIS168 GLN169 PHE170 LEU171 GLN172 LYS173 ASP174 LEU175 PRO176 ASP177 LEU178 TYR179 VAL180 ASP181 LEU182 SER183 THR184 VAL185 GLY186 GLU187 GLY188 TYR189 ALA190 ALA191 ASP192 HIS193 LEU194 ALA195 ARG196 LEU197 MET198 GLU199 GLN200 GLU201 GLY202 ILE203 ALA204 ARG205 TYR206 LEU207 VAL208 SER209 VAL210 GLY211 GLY212 ALA213 LEU214 SER215 SER216 ARG217 GLY218 MET219 ASN220 ALA221 GLN222 GLY223 GLN224 PRO225 TRP226 ARG227 VAL228 ALA229 ILE230 GLN231 LYS232 PRO233 THR234 ASP235 ARG236 GLU237 ASN238 ALA239 VAL240 GLN241 ALA242 ILE243 VAL244 ASP245 ILE246 ASN247 GLY248 HIS249 GLY250 ILE251 SER252 THR253 SER254 GLY255 SER256 TYR257 ARG258 ASN259 TYR260 TYR261 GLU262 LEU263 ASP264 GLY265 LYS266 ARG267 VAL268 SER269 HIS270 VAL271 ILE272 ASP273 PRO274 GLN275 THR276 GLY277 ARG278 PRO279 ILE280 GLU281 HIS282 ASN283 LEU284 VAL285 SER286 VAL287 THR288 VAL289 ILE290 ALA291 PRO292 THR293 ALA294 LEU295 GLU296 ALA297 ASP298 GLY299 TRP300 ASP301 THR302 GLY303 LEU304 MET305 VAL306 LEU307 GLY308 THR309 GLN310 LYS311 ALA312 GLN313 GLU314 VAL315 VAL316 ARG317 ARG318 GLU319 GLY320 LEU321 ALA322 VAL323 PHE324 MET325 ILE326 MET327 LYS328 GLU329 GLY330 GLU331 GLY332 PHE333 LYS334 THR335 TRP336 MET337 SER338 PRO339 GLN340 PHE341 LYS342 THR343 PHE344 LEU345 VAL346 SER347 ASP348
Unit 4 ALA33 GLN34 VAL35 LEU36 GLU37 GLY38 LYS39 THR40 MET41 GLY42 THR43 LEU44 TRP45 ARG46 VAL47 SER48 VAL49 VAL50 GLY51 ILE52 ASP53 ALA54 LYS55 ARG56 ALA57 ALA58 GLU59 LEU60 GLN61 THR62 LYS63 ILE64 GLN65 THR66 GLN67 LEU68 ASP69 ALA70 ASP71 ASP72 TRP73 LEU74 LEU75 SER76 THR77 TYR78 LYS79 ASN80 ASP81 SER82 ALA83 LEU84 MET85 ARG86 PHE87 ASN88 HIS89 SER90 ARG91 SER92 LEU93 ALA94 PRO95 TRP96 PRO97 VAL98 SER99 GLU100 ALA101 MET102 ALA103 ASP104 ILE105 VAL106 THR107 SER108 ALA109 LEU110 ARG111 ILE112 GLY113 ALA114 LYS115 THR116 ASP117 GLY118 ALA119 MET120 ASP121 ILE122 THR123 VAL124 GLY125 PRO126 LEU127 VAL128 ASN129 LEU130 TRP131 GLY132 PHE133 GLY134 PRO135 ASP136 ARG137 GLN138 PRO139 LEU140 HIS141 ILE142 PRO143 THR144 PRO145 ALA146 GLN147 ILE148 ASP149 ALA150 ALA151 LYS152 ALA153 LYS154 THR155 GLY156 LEU157 GLN158 HIS159 LEU160 GLN161 VAL162 ILE163 ASP164 ARG165 ALA166 GLY167 HIS168 GLN169 PHE170 LEU171 GLN172 LYS173 ASP174 LEU175 PRO176 ASP177 LEU178 TYR179 VAL180 ASP181 LEU182 SER183 THR184 VAL185 GLY186 GLU187 GLY188 TYR189 ALA190 ALA191 ASP192 HIS193 LEU194 ALA195 ARG196 LEU197 MET198 GLU199 GLN200 GLU201 GLY202 ILE203 ALA204 ARG205 TYR206 LEU207 VAL208 SER209 VAL210 GLY211 GLY212 ALA213 LEU214 SER215 SER216 ARG217 GLY218 MET219 ASN220 ALA221 GLN222 GLY223 GLN224 PRO225 TRP226 ARG227 VAL228 ALA229 ILE230 GLN231 LYS232 PRO233 THR234 GLN241 ALA242 ILE243 VAL244 ASP245 ILE246 ASN247 GLY248 HIS249 GLY250 ILE251 SER252 THR253 SER254 GLY255 SER256 TYR257 ARG258 ASN259 TYR260 TYR261 GLU262 LEU263 ASP264 GLY265 LYS266 ARG267 VAL268 SER269 HIS270 VAL271 ILE272 ASP273 PRO274 GLN275 THR276 GLY277 ARG278 PRO279 ILE280 GLU281 HIS282 ASN283 LEU284 VAL285 SER286 VAL287 THR288 VAL289 ILE290 ALA291 PRO292 THR293 ALA294 LEU295 GLU296 ALA297 ASP298 GLY299 TRP300 ASP301 THR302 GLY303 LEU304 MET305 VAL306 LEU307 GLY308 THR309 GLN310 LYS311 ALA312 GLN313 GLU314 VAL315 VAL316 ARG317 ARG318 GLU319 GLY320 LEU321 ALA322 VAL323 PHE324 MET325 ILE326 MET327 LYS328 GLU329 GLY330 GLU331 GLY332 PHE333 LYS334 THR335 TRP336 MET337 SER338 PRO339 GLN340 PHE341 LYS342 THR343 PHE344 LEU345 VAL346 SER347 ASP348
Ligands
Unit 5 SO4357 SO4358 SO4359 SO4360 SO4361 SO4362 SO4363 SO4364 SO4365 SO4366 SO4367 SO4368 SO4369 FAD500
Unit 6 SO4357 SO4358 SO4359 SO4360 SO4361 SO4362 SO4363 SO4364 SO4365 SO4366 SO4367 SO4368 FAD500
Unit 7 SO4357 SO4358 SO4359 SO4360 SO4361 SO4362 SO4363 SO4364 SO4365 SO4366 SO4367 FAD500
Unit 8 SO4357 SO4358 SO4359 SO4360 SO4361 SO4362 SO4363 SO4364 FAD500
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany