3PMH - Sequence, Chains, Asymmetric and Biological Units

• Title: MECHANISM OF SULFOTYROSINE-MEDIATED GLYCOPROTEIN IB INTERACT TWO DISTINCT ALPHA-THROMBIN SITES
• Keywords: SULFATED TYROSINE RESIDUES, LEUCINE RICH REPEATS, PROTEASE P RECEPTOR OF THROMBIN, THROMBIN BINDING, PLATELET SURFACE, B CLOTING, HYDROLASE-INHIBITOR COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3PMH	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	THROMBIN ALPHA-CHAIN	A	36	287	0
2	Protein	THROMBIN BETA-CHAIN	B	259	2093	0
3	Protein	PLATELET GLYCOPROTEIN IB ALPHA CHAIN	G	284	2189	48
4	Ligand		C	5	0	61
5	Ligand	THROMBIN BETA-CHAIN	B	1	0	31
6	Ligand	PLATELET GLYCOPROTEIN IB ALPHA CHAIN	G	1	0	14
total				586	4569	154

Proteins

Unit 1	CYS 1 ASP 1A ALA 1B GLU 1C GLY 1D SER 1E GLY 1F PHE 1G THR 1H GLY 2 LEU 3 ARG 4 PRO 5 LEU 6 PHE 7 GLU 8 LYS 9 LYS 10 SER 11 LEU 12 GLU 13 ASP 14 LYS 14A THR 14B GLU 14C ARG 14D GLU 14E LEU 14F LEU 14G GLU 14H SER 14I TYR 14J ILE 14K ASP 14L GLY 14M ARG 15
Unit 2	ILE 16 VAL 17 GLU 18 GLY 19 SER 20 ASP 21 ALA 22 GLU 23 ILE 24 GLY 25 MET 26 SER 27 PRO 28 TRP 29 GLN 30 VAL 31 MET 32 LEU 33 PHE 34 ARG 35 LYS 36 SER 36A PRO 37 GLN 38 GLU 39 LEU 40 LEU 41 CYS 42 GLY 43 ALA 44 SER 45 LEU 46 ILE 47 SER 48 ASP 49 ARG 50 TRP 51 VAL 52 LEU 53 THR 54 ALA 55 ALA 56 HIS 57 CYS 58 LEU 59 LEU 60 TYR 60A PRO 60B PRO 60C TRP 60D ASP 60E LYS 60F ASN 60G PHE 60H THR 60I GLU 61 ASN 62 ASP 63 LEU 64 LEU 65 VAL 66 ARG 67 ILE 68 GLY 69 LYS 70 HIS 71 SER 72 ARG 73 THR 74 ARG 75 TYR 76 GLU 77 ARG 77A ASN 78 ILE 79 GLU 80 LYS 81 ILE 82 SER 83 MET 84 LEU 85 GLU 86 LYS 87 ILE 88 TYR 89 ILE 90 HIS 91 PRO 92 ARG 93 TYR 94 ASN 95 TRP 96 ARG 97 GLU 97A ASN 98 LEU 99 ASP 100 ARG 101 ASP 102 ILE 103 ALA 104 LEU 105 MET 106 LYS 107 LEU 108 LYS 109 LYS 110 PRO 111 VAL 112 ALA 113 PHE 114 SER 115 ASP 116 TYR 117 ILE 118 HIS 119 PRO 120 VAL 121 CYS 122 LEU 123 PRO 124 ASP 125 ARG 126 GLU 127 THR 128 ALA 129 ALA 129A SER 129B LEU 129C LEU 130 GLN 131 ALA 132 GLY 133 TYR 134 LYS 135 GLY 136 ARG 137 VAL 138 THR 139 GLY 140 TRP 141 GLY 142 ASN 143 LEU 144 LYS 145 GLU 146 THR 147 TRP 148 THR 149 ALA 149A ASN 149B VAL 149C GLY 149D LYS 149E GLY 150 GLN 151 PRO 152 SER 153 VAL 154 LEU 155 GLN 156 VAL 157 VAL 158 ASN 159 LEU 160 PRO 161 ILE 162 VAL 163 GLU 164 ARG 165 PRO 166 VAL 167 CYS 168 LYS 169 ASP 170 SER 171 THR 172 ARG 173 ILE 174 ARG 175 ILE 176 THR 177 ASP 178 ASN 179 MET 180 PHE 181 CYS 182 ALA 183 GLY 184 TYR 184A LYS 185 PRO 186 ASP 186A GLU 186B GLY 186C LYS 186D ARG 187 GLY 188 ASP 189 ALA 190 CYS 191 GLU 192 GLY 193 ASP 194 SER 195 GLY 196 GLY 197 PRO 198 PHE 199 VAL 200 MET 201 LYS 202 SER 203 PRO 204 PHE 204A ASN 204B ASN 205 ARG 206 TRP 207 TYR 208 GLN 209 MET 210 GLY 211 ILE 212 VAL 213 SER 214 TRP 215 GLY 216 GLU 217 GLY 219 CYS 220 ARG 221 ASP 221A ASP 222 GLY 223 LYS 224 TYR 225 GLY 226 PHE 227 TYR 228 THR 229 HIS 230 VAL 231 PHE 232 ARG 233 LEU 234 LYS 235 LYS 236 TRP 237 ILE 238 GLN 239 LYS 240 VAL 241 ILE 242 ASP 243 GLN 244 PHE 245 GLY 246 GLU 247
Unit 3	HIS 1 PRO 2 ILE 3 CYS 4 GLU 5 VAL 6 SER 7 LYS 8 VAL 9 ALA 10 SER 11 HIS 12 LEU 13 GLU 14 VAL 15 ASN 16 CYS 17 ASP 18 LYS 19 ARG 20 ASN 21 LEU 22 THR 23 ALA 24 LEU 25 PRO 26 PRO 27 ASP 28 LEU 29 PRO 30 LYS 31 ASP 32 THR 33 THR 34 ILE 35 LEU 36 HIS 37 LEU 38 SER 39 GLU 40 ASN 41 LEU 42 LEU 43 TYR 44 THR 45 PHE 46 SER 47 LEU 48 ALA 49 THR 50 LEU 51 MET 52 PRO 53 TYR 54 THR 55 ARG 56 LEU 57 THR 58 GLN 59 LEU 60 ASN 61 LEU 62 ASP 63 ARG 64 ALA 65 GLU 66 LEU 67 THR 68 LYS 69 LEU 70 GLN 71 VAL 72 ASP 73 GLY 74 THR 75 LEU 76 PRO 77 VAL 78 LEU 79 GLY 80 THR 81 LEU 82 ASP 83 LEU 84 SER 85 HIS 86 ASN 87 GLN 88 LEU 89 GLN 90 SER 91 LEU 92 PRO 93 LEU 94 LEU 95 GLY 96 GLN 97 THR 98 LEU 99 PRO 100 ALA 101 LEU 102 THR 103 VAL 104 LEU 105 ASP 106 VAL 107 SER 108 PHE 109 ASN 110 ARG 111 LEU 112 THR 113 SER 114 LEU 115 PRO 116 LEU 117 GLY 118 ALA 119 LEU 120 ARG 121 GLY 122 LEU 123 GLY 124 GLU 125 LEU 126 GLN 127 GLU 128 LEU 129 TYR 130 LEU 131 LYS 132 GLY 133 ASN 134 GLU 135 LEU 136 LYS 137 THR 138 LEU 139 PRO 140 PRO 141 GLY 142 LEU 143 LEU 144 THR 145 PRO 146 THR 147 PRO 148 LYS 149 LEU 150 GLU 151 LYS 152 LEU 153 SER 154 LEU 155 ALA 156 ASN 157 ASN 158 ASN 159 LEU 160 THR 161 GLU 162 LEU 163 PRO 164 ALA 165 GLY 166 LEU 167 LEU 168 ASN 169 GLY 170 LEU 171 GLU 172 ASN 173 LEU 174 ASP 175 THR 176 LEU 177 LEU 178 LEU 179 GLN 180 GLU 181 ASN 182 SER 183 LEU 184 TYR 185 THR 186 ILE 187 PRO 188 LYS 189 GLY 190 PHE 191 PHE 192 GLY 193 SER 194 HIS 195 LEU 196 LEU 197 PRO 198 PHE 199 ALA 200 PHE 201 LEU 202 HIS 203 GLY 204 ASN 205 PRO 206 TRP 207 LEU 208 CYS 209 ASN 210 CYS 211 GLU 212 ILE 213 LEU 214 TYR 215 PHE 216 ARG 217 ARG 218 TRP 219 LEU 220 GLN 221 ASP 222 ASN 223 ALA 224 GLU 225 ASN 226 VAL 227 TYR 228 VAL 229 TRP 230 LYS 231 GLN 232 GLY 233 VAL 234 ASP 235 VAL 236 LYS 237 ALA 238 MET 239 THR 240 SER 241 ASN 242 VAL 243 ALA 244 SER 245 VAL 246 GLN 247 CYS 248 ASP 249 ASN 250 SER 251 ASP 252 LYS 253 PHE 254 PRO 255 VAL 256 TYR 257 LYS 258 TYR 259 PRO 260 GLY 261 LYS 262 GLY 263 CYS 264 PRO 265 THR 266 LEU 267 GLY 268 ASP 269 GLU 270 GLY 271 ASP 272 THR 273 ASP 274 LEU 275 TYS 276 ASP 277 TYS 278 TYS 279 PRO 280 GLU 281 GLU 282 ASP 283 THR 284

Ligands

Unit 4	NAG 1 NAG 2 MAN 3 MAN 4 MAN 5
Unit 5	0G7 301
Unit 6	NAG 601