3PL2 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A 5-KETO-2-DEOXYGLUCONOKINASE (NCGL0155 FROM CORYNEBACTERIUM GLUTAMICUM ATCC 13032 KITASATO AT 1.89 RESOLUTION
• Keywords: PFKB PFAM MOTIF, INOSITOL PHOSPHATE METABOLISM, RIBOKINASE-L STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3PL2	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SUGAR KINASE, RIBOKINASE FAMILY	A	310	2339	32
2	Protein	SUGAR KINASE, RIBOKINASE FAMILY	B	310	2338	32
3	Protein	SUGAR KINASE, RIBOKINASE FAMILY	C	310	2341	32
4	Protein	SUGAR KINASE, RIBOKINASE FAMILY	D	309	2334	32
5	Ligand	SUGAR KINASE, RIBOKINASE FAMILY	B	1	0	13
6	Water			577	0	577
total				1817	9352	718

Proteins

Unit 1	SER 6 THR 7 HIS 8 GLU 9 VAL 10 LEU 11 ALA 12 ILE 13 GLY 14 ARG 15 LEU 16 GLY 17 VAL 18 ASP 19 ILE 20 TYR 21 PRO 22 LEU 23 GLN 24 SER 25 GLY 26 VAL 27 GLY 28 LEU 29 ALA 30 ASP 31 VAL 32 GLN 33 SER 34 PHE 35 GLY 36 LYS 37 TYR 38 LEU 39 GLY 40 GLY 41 SER 42 ALA 43 ALA 44 ASN 45 VAL 46 SER 47 VAL 48 ALA 49 ALA 50 ALA 51 ARG 52 HIS 53 GLY 54 HIS 55 ASN 56 SER 57 ALA 58 LEU 59 LEU 60 SER 61 ARG 62 VAL 63 GLY 64 ASN 65 ASP 66 PRO 67 PHE 68 GLY 69 GLU 70 TYR 71 LEU 72 LEU 73 ALA 74 GLU 75 LEU 76 GLU 77 ARG 78 LEU 79 GLY 80 VAL 81 ASP 82 ASN 83 GLN 84 TYR 85 VAL 86 ALA 87 THR 88 ASP 89 GLN 90 THR 91 PHE 92 LYS 93 THR 94 PRO 95 VAL 96 THR 97 PHE 98 CYS 99 GLU 100 ILE 101 PHE 102 PRO 103 PRO 104 ASP 105 ASP 106 PHE 107 PRO 108 LEU 109 TYR 110 PHE 111 TYR 112 ARG 113 GLU 114 PRO 115 LYS 116 ALA 117 PRO 118 ASP 119 LEU 120 ASN 121 ILE 122 GLU 123 SER 124 ALA 125 ASP 126 VAL 127 SER 128 LEU 129 ASP 130 ASP 131 VAL 132 ARG 133 GLU 134 ALA 135 ASP 136 ILE 137 LEU 138 TRP 139 PHE 140 THR 141 LEU 142 THR 143 GLY 144 PHE 145 SER 146 GLU 147 GLU 148 PRO 149 SER 150 ARG 151 GLY 152 THR 153 HIS 154 ARG 155 GLU 156 ILE 157 LEU 158 THR 159 THR 160 ARG 161 ALA 162 ASN 163 ARG 164 ARG 165 HIS 166 THR 167 ILE 168 PHE 169 ASP 170 LEU 171 ASP 172 TYR 173 ARG 174 PRO 175 MSE 176 PHE 177 TRP 178 GLU 179 SER 180 PRO 181 GLU 182 GLU 183 ALA 184 THR 185 LYS 186 GLN 187 ALA 188 GLU 189 TRP 190 ALA 191 LEU 192 GLN 193 HIS 194 SER 195 THR 196 VAL 197 ALA 198 VAL 199 GLY 200 ASN 201 LYS 202 GLU 203 GLU 204 CYS 205 GLU 206 ILE 207 ALA 208 VAL 209 GLY 210 GLU 211 THR 212 GLU 213 PRO 214 GLU 215 ARG 216 ALA 217 GLY 218 ARG 219 ALA 220 LEU 221 LEU 222 GLU 223 ARG 224 GLY 225 VAL 226 GLU 227 LEU 228 ALA 229 ILE 230 VAL 231 LYS 232 GLN 233 GLY 234 PRO 235 LYS 236 GLY 237 VAL 238 MSE 239 ALA 240 MSE 241 THR 242 LYS 243 ASP 244 GLU 245 THR 246 VAL 247 GLU 248 VAL 249 PRO 250 PRO 251 PHE 252 PHE 253 VAL 254 ASP 255 VAL 256 ILE 257 ASN 258 GLY 259 LEU 260 GLY 261 ALA 262 GLY 263 ASP 264 ALA 265 PHE 266 GLY 267 GLY 268 ALA 269 LEU 270 CYS 271 HIS 272 GLY 273 LEU 274 LEU 275 SER 276 GLU 277 TRP 278 PRO 279 LEU 280 GLU 281 LYS 282 VAL 283 LEU 284 ARG 285 PHE 286 ALA 287 ASN 288 THR 289 ALA 290 GLY 291 ALA 292 LEU 293 VAL 294 ALA 295 SER 296 ARG 297 LEU 298 GLU 299 CYS 300 SER 301 THR 302 ALA 303 MSE 304 PRO 305 THR 306 THR 307 ASP 308 GLU 309 VAL 310 GLU 311 ALA 312 SER 313 LEU 314 ASN 315
Unit 2	SER 6 THR 7 HIS 8 GLU 9 VAL 10 LEU 11 ALA 12 ILE 13 GLY 14 ARG 15 LEU 16 GLY 17 VAL 18 ASP 19 ILE 20 TYR 21 PRO 22 LEU 23 GLN 24 SER 25 GLY 26 VAL 27 GLY 28 LEU 29 ALA 30 ASP 31 VAL 32 GLN 33 SER 34 PHE 35 GLY 36 LYS 37 TYR 38 LEU 39 GLY 40 GLY 41 SER 42 ALA 43 ALA 44 ASN 45 VAL 46 SER 47 VAL 48 ALA 49 ALA 50 ALA 51 ARG 52 HIS 53 GLY 54 HIS 55 ASN 56 SER 57 ALA 58 LEU 59 LEU 60 SER 61 ARG 62 VAL 63 GLY 64 ASN 65 ASP 66 PRO 67 PHE 68 GLY 69 GLU 70 TYR 71 LEU 72 LEU 73 ALA 74 GLU 75 LEU 76 GLU 77 ARG 78 LEU 79 GLY 80 VAL 81 ASP 82 ASN 83 GLN 84 TYR 85 VAL 86 ALA 87 THR 88 ASP 89 GLN 90 THR 91 PHE 92 LYS 93 THR 94 PRO 95 VAL 96 THR 97 PHE 98 CYS 99 GLU 100 ILE 101 PHE 102 PRO 103 PRO 104 ASP 105 ASP 106 PHE 107 PRO 108 LEU 109 TYR 110 PHE 111 TYR 112 ARG 113 GLU 114 PRO 115 LYS 116 ALA 117 PRO 118 ASP 119 LEU 120 ASN 121 ILE 122 GLU 123 SER 124 ALA 125 ASP 126 VAL 127 SER 128 LEU 129 ASP 130 ASP 131 VAL 132 ARG 133 GLU 134 ALA 135 ASP 136 ILE 137 LEU 138 TRP 139 PHE 140 THR 141 LEU 142 THR 143 GLY 144 PHE 145 SER 146 GLU 147 GLU 148 PRO 149 SER 150 ARG 151 GLY 152 THR 153 HIS 154 ARG 155 GLU 156 ILE 157 LEU 158 THR 159 THR 160 ARG 161 ALA 162 ASN 163 ARG 164 ARG 165 HIS 166 THR 167 ILE 168 PHE 169 ASP 170 LEU 171 ASP 172 TYR 173 ARG 174 PRO 175 MSE 176 PHE 177 TRP 178 GLU 179 SER 180 PRO 181 GLU 182 GLU 183 ALA 184 THR 185 LYS 186 GLN 187 ALA 188 GLU 189 TRP 190 ALA 191 LEU 192 GLN 193 HIS 194 SER 195 THR 196 VAL 197 ALA 198 VAL 199 GLY 200 ASN 201 LYS 202 GLU 203 GLU 204 CYS 205 GLU 206 ILE 207 ALA 208 VAL 209 GLY 210 GLU 211 THR 212 GLU 213 PRO 214 GLU 215 ARG 216 ALA 217 GLY 218 ARG 219 ALA 220 LEU 221 LEU 222 GLU 223 ARG 224 GLY 225 VAL 226 GLU 227 LEU 228 ALA 229 ILE 230 VAL 231 LYS 232 GLN 233 GLY 234 PRO 235 LYS 236 GLY 237 VAL 238 MSE 239 ALA 240 MSE 241 THR 242 LYS 243 ASP 244 GLU 245 THR 246 VAL 247 GLU 248 VAL 249 PRO 250 PRO 251 PHE 252 PHE 253 VAL 254 ASP 255 VAL 256 ILE 257 ASN 258 GLY 259 LEU 260 GLY 261 ALA 262 GLY 263 ASP 264 ALA 265 PHE 266 GLY 267 GLY 268 ALA 269 LEU 270 CYS 271 HIS 272 GLY 273 LEU 274 LEU 275 SER 276 GLU 277 TRP 278 PRO 279 LEU 280 GLU 281 LYS 282 VAL 283 LEU 284 ARG 285 PHE 286 ALA 287 ASN 288 THR 289 ALA 290 GLY 291 ALA 292 LEU 293 VAL 294 ALA 295 SER 296 ARG 297 LEU 298 GLU 299 CYS 300 SER 301 THR 302 ALA 303 MSE 304 PRO 305 THR 306 THR 307 ASP 308 GLU 309 VAL 310 GLU 311 ALA 312 SER 313 LEU 314 ASN 315
Unit 3	SER 6 THR 7 HIS 8 GLU 9 VAL 10 LEU 11 ALA 12 ILE 13 GLY 14 ARG 15 LEU 16 GLY 17 VAL 18 ASP 19 ILE 20 TYR 21 PRO 22 LEU 23 GLN 24 SER 25 GLY 26 VAL 27 GLY 28 LEU 29 ALA 30 ASP 31 VAL 32 GLN 33 SER 34 PHE 35 GLY 36 LYS 37 TYR 38 LEU 39 GLY 40 GLY 41 SER 42 ALA 43 ALA 44 ASN 45 VAL 46 SER 47 VAL 48 ALA 49 ALA 50 ALA 51 ARG 52 HIS 53 GLY 54 HIS 55 ASN 56 SER 57 ALA 58 LEU 59 LEU 60 SER 61 ARG 62 VAL 63 GLY 64 ASN 65 ASP 66 PRO 67 PHE 68 GLY 69 GLU 70 TYR 71 LEU 72 LEU 73 ALA 74 GLU 75 LEU 76 GLU 77 ARG 78 LEU 79 GLY 80 VAL 81 ASP 82 ASN 83 GLN 84 TYR 85 VAL 86 ALA 87 THR 88 ASP 89 GLN 90 THR 91 PHE 92 LYS 93 THR 94 PRO 95 VAL 96 THR 97 PHE 98 CYS 99 GLU 100 ILE 101 PHE 102 PRO 103 PRO 104 ASP 105 ASP 106 PHE 107 PRO 108 LEU 109 TYR 110 PHE 111 TYR 112 ARG 113 GLU 114 PRO 115 LYS 116 ALA 117 PRO 118 ASP 119 LEU 120 ASN 121 ILE 122 GLU 123 SER 124 ALA 125 ASP 126 VAL 127 SER 128 LEU 129 ASP 130 ASP 131 VAL 132 ARG 133 GLU 134 ALA 135 ASP 136 ILE 137 LEU 138 TRP 139 PHE 140 THR 141 LEU 142 THR 143 GLY 144 PHE 145 SER 146 GLU 147 GLU 148 PRO 149 SER 150 ARG 151 GLY 152 THR 153 HIS 154 ARG 155 GLU 156 ILE 157 LEU 158 THR 159 THR 160 ARG 161 ALA 162 ASN 163 ARG 164 ARG 165 HIS 166 THR 167 ILE 168 PHE 169 ASP 170 LEU 171 ASP 172 TYR 173 ARG 174 PRO 175 MSE 176 PHE 177 TRP 178 GLU 179 SER 180 PRO 181 GLU 182 GLU 183 ALA 184 THR 185 LYS 186 GLN 187 ALA 188 GLU 189 TRP 190 ALA 191 LEU 192 GLN 193 HIS 194 SER 195 THR 196 VAL 197 ALA 198 VAL 199 GLY 200 ASN 201 LYS 202 GLU 203 GLU 204 CYS 205 GLU 206 ILE 207 ALA 208 VAL 209 GLY 210 GLU 211 THR 212 GLU 213 PRO 214 GLU 215 ARG 216 ALA 217 GLY 218 ARG 219 ALA 220 LEU 221 LEU 222 GLU 223 ARG 224 GLY 225 VAL 226 GLU 227 LEU 228 ALA 229 ILE 230 VAL 231 LYS 232 GLN 233 GLY 234 PRO 235 LYS 236 GLY 237 VAL 238 MSE 239 ALA 240 MSE 241 THR 242 LYS 243 ASP 244 GLU 245 THR 246 VAL 247 GLU 248 VAL 249 PRO 250 PRO 251 PHE 252 PHE 253 VAL 254 ASP 255 VAL 256 ILE 257 ASN 258 GLY 259 LEU 260 GLY 261 ALA 262 GLY 263 ASP 264 ALA 265 PHE 266 GLY 267 GLY 268 ALA 269 LEU 270 CYS 271 HIS 272 GLY 273 LEU 274 LEU 275 SER 276 GLU 277 TRP 278 PRO 279 LEU 280 GLU 281 LYS 282 VAL 283 LEU 284 ARG 285 PHE 286 ALA 287 ASN 288 THR 289 ALA 290 GLY 291 ALA 292 LEU 293 VAL 294 ALA 295 SER 296 ARG 297 LEU 298 GLU 299 CYS 300 SER 301 THR 302 ALA 303 MSE 304 PRO 305 THR 306 THR 307 ASP 308 GLU 309 VAL 310 GLU 311 ALA 312 SER 313 LEU 314 ASN 315
Unit 4	SER 6 THR 7 HIS 8 GLU 9 VAL 10 LEU 11 ALA 12 ILE 13 GLY 14 ARG 15 LEU 16 GLY 17 VAL 18 ASP 19 ILE 20 TYR 21 PRO 22 LEU 23 GLN 24 SER 25 GLY 26 VAL 27 GLY 28 LEU 29 ALA 30 ASP 31 VAL 32 GLN 33 SER 34 PHE 35 GLY 36 LYS 37 TYR 38 LEU 39 GLY 40 GLY 41 SER 42 ALA 43 ALA 44 ASN 45 VAL 46 SER 47 VAL 48 ALA 49 ALA 50 ALA 51 ARG 52 HIS 53 GLY 54 HIS 55 ASN 56 SER 57 ALA 58 LEU 59 LEU 60 SER 61 ARG 62 VAL 63 GLY 64 ASN 65 ASP 66 PRO 67 PHE 68 GLY 69 GLU 70 TYR 71 LEU 72 LEU 73 ALA 74 GLU 75 LEU 76 GLU 77 ARG 78 LEU 79 GLY 80 VAL 81 ASP 82 ASN 83 GLN 84 TYR 85 VAL 86 ALA 87 THR 88 ASP 89 GLN 90 THR 91 PHE 92 LYS 93 THR 94 PRO 95 VAL 96 THR 97 PHE 98 CYS 99 GLU 100 ILE 101 PHE 102 PRO 103 PRO 104 ASP 105 ASP 106 PHE 107 PRO 108 LEU 109 TYR 110 PHE 111 TYR 112 ARG 113 GLU 114 PRO 115 LYS 116 ALA 117 PRO 118 ASP 119 LEU 120 ASN 121 ILE 122 GLU 123 SER 124 ALA 125 ASP 126 VAL 127 SER 128 LEU 129 ASP 130 ASP 131 VAL 132 ARG 133 GLU 134 ALA 135 ASP 136 ILE 137 LEU 138 TRP 139 PHE 140 THR 141 LEU 142 THR 143 GLY 144 PHE 145 SER 146 GLU 147 GLU 148 PRO 149 SER 150 ARG 151 GLY 152 THR 153 HIS 154 ARG 155 GLU 156 ILE 157 LEU 158 THR 159 THR 160 ARG 161 ALA 162 ASN 163 ARG 164 ARG 165 HIS 166 THR 167 ILE 168 PHE 169 ASP 170 LEU 171 ASP 172 TYR 173 ARG 174 PRO 175 MSE 176 PHE 177 TRP 178 GLU 179 SER 180 PRO 181 GLU 182 GLU 183 ALA 184 THR 185 LYS 186 GLN 187 ALA 188 GLU 189 TRP 190 ALA 191 LEU 192 GLN 193 HIS 194 SER 195 THR 196 VAL 197 ALA 198 VAL 199 GLY 200 ASN 201 LYS 202 GLU 203 GLU 204 CYS 205 GLU 206 ILE 207 ALA 208 VAL 209 GLY 210 GLU 211 THR 212 GLU 213 PRO 214 GLU 215 ARG 216 ALA 217 GLY 218 ARG 219 ALA 220 LEU 221 LEU 222 GLU 223 ARG 224 GLY 225 VAL 226 GLU 227 LEU 228 ALA 229 ILE 230 VAL 231 LYS 232 GLN 233 GLY 234 PRO 235 LYS 236 GLY 237 VAL 238 MSE 239 ALA 240 MSE 241 THR 242 LYS 243 ASP 244 GLU 245 THR 246 VAL 247 GLU 248 VAL 249 PRO 250 PRO 251 PHE 252 PHE 253 VAL 254 ASP 255 VAL 256 ILE 257 ASN 258 GLY 259 LEU 260 GLY 261 ALA 262 GLY 263 ASP 264 ALA 265 PHE 266 GLY 267 GLY 268 ALA 269 LEU 270 CYS 271 HIS 272 GLY 273 LEU 274 LEU 275 SER 276 GLU 277 TRP 278 PRO 279 LEU 280 GLU 281 LYS 282 VAL 283 LEU 284 ARG 285 PHE 286 ALA 287 ASN 288 THR 289 ALA 290 GLY 291 ALA 292 LEU 293 VAL 294 ALA 295 SER 296 ARG 297 LEU 298 GLU 299 CYS 300 SER 301 THR 302 ALA 303 MSE 304 PRO 305 THR 306 THR 307 ASP 308 GLU 309 VAL 310 GLU 311 ALA 312 SER 313 LEU 314

Ligands

Unit 5

CIT 400