3PKO - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF GERANYLGERANYL PYROPHOSPHATE SYNTHASE F LACTOBACILLUS BREVIS ATCC 367 COMPLEXED WITH CITRATE
• Keywords: ISOPRENYL DIPHOSPHATE SYNTHASE, STRUCTURAL GENOMICS, PSI, PR STRUCTURE INITIATIVE, NYSGRC, NEW YORK STRUCTURAL GENOMIX R CONSORTIUM, NYSGXRC, TRANSFERASE, NEW YORK SGX RESEARCH CEN STRUCTURAL GENOMICS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3PKO	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GERANYLGERANYL PYROPHOSPHATE SYNTHASE	A	331	2618	0
2	Protein	GERANYLGERANYL PYROPHOSPHATE SYNTHASE	B	310	2453	0
3	Ligand	GERANYLGERANYL PYROPHOSPHATE SYNTHASE	A	2	0	19
4	Water			258	0	258
total				901	5071	277

Proteins

Unit 1

ALA -7 HIS -6 HIS -5 HIS -4 HIS -3 HIS -2 HIS -1 SER 0 LEU 1 ARG 3 GLN 4 LEU 5 TRP 6 ARG 7 GLN 8 PHE 9 PRO 10 GLN 11 VAL 12 GLU 13 PRO 14 GLN 15 LEU 16 THR 17 ALA 18 LEU 19 GLN 20 ASP 21 TYR 22 LEU 23 LEU 24 ARG 25 THR 26 VAL 27 GLN 28 LEU 29 ASP 30 ASN 31 GLN 32 PRO 33 ILE 34 HIS 35 HIS 36 LYS 37 ILE 38 LEU 39 ALA 40 LEU 41 LEU 42 LYS 43 SER 44 GLY 45 GLY 46 LYS 47 LEU 48 LEU 49 ARG 50 PRO 51 GLY 52 TYR 53 PHE 54 TYR 55 LEU 56 PHE 57 SER 58 THR 59 PHE 60 GLY 61 ASN 62 ALA 63 ALA 64 THR 65 PRO 66 ALA 67 GLN 68 LEU 69 GLN 70 ALA 71 GLY 72 ALA 73 ALA 74 ALA 75 ILE 76 GLU 77 ILE 78 LEU 79 HIS 80 VAL 81 GLY 82 THR 83 LEU 84 ILE 85 HIS 86 ASP 87 ASP 88 VAL 89 ILE 90 ASP 91 ASP 92 SER 93 PRO 94 THR 95 ARG 96 ARG 97 GLY 98 VAL 99 ARG 100 THR 101 ILE 102 GLN 103 MET 104 THR 105 TYR 106 GLY 107 GLN 108 ARG 109 ASN 110 ALA 111 ILE 112 TYR 113 ALA 114 GLY 115 ASP 116 PHE 117 MET 118 PHE 119 THR 120 VAL 121 TYR 122 PHE 123 ASP 124 GLN 125 VAL 126 LEU 127 LYS 128 SER 129 THR 130 THR 131 ASP 132 ARG 133 SER 134 LEU 135 ILE 136 GLN 137 ASN 138 HIS 139 ILE 140 ASP 141 ALA 142 MET 143 HIS 144 ARG 145 ILE 146 LEU 147 GLN 148 GLY 149 GLU 150 LEU 151 HIS 152 GLN 153 MET 154 ASP 155 LEU 156 ASN 157 TYR 158 ARG 159 GLU 160 ASP 161 ILE 162 THR 163 LEU 164 ASP 165 ALA 166 TYR 167 LEU 168 ASN 169 GLU 170 ILE 171 ALA 172 GLY 173 LYS 174 THR 175 ALA 176 GLU 177 LEU 178 PHE 179 ALA 180 LEU 181 SER 182 CYS 183 TYR 184 GLN 185 GLY 186 ALA 187 GLN 188 LEU 189 ALA 190 GLY 191 ALA 192 PRO 193 GLN 194 SER 195 VAL 196 ILE 197 ASP 198 ARG 199 THR 200 ARG 201 ASP 202 ILE 203 GLY 204 ILE 205 ALA 206 ILE 207 GLY 208 CYS 209 ALA 210 TYR 211 GLN 212 MET 213 LEU 214 ASP 215 ASP 216 ILE 217 LEU 218 ASP 219 TYR 220 ALA 221 GLY 222 ASP 223 PRO 224 LYS 225 ARG 226 THR 227 GLN 228 LYS 229 PRO 230 VAL 231 LEU 232 GLU 233 ASP 234 LEU 235 ARG 236 SER 237 GLY 238 VAL 239 TYR 240 SER 241 LEU 242 PRO 243 LEU 244 LEU 245 LEU 246 SER 247 LEU 248 SER 249 HIS 250 ALA 251 PRO 252 ARG 253 ASP 254 PHE 255 HIS 256 LYS 257 LEU 258 LEU 259 LYS 260 LYS 261 LYS 262 GLN 263 ALA 264 MET 265 THR 266 LEU 267 GLU 268 ASP 269 ILE 270 LYS 271 HIS 272 VAL 273 GLN 274 ALA 275 LEU 276 VAL 277 ALA 278 GLN 279 TYR 280 ASP 281 GLY 282 VAL 283 GLY 284 ALA 285 ALA 286 LYS 287 GLN 288 LEU 289 ALA 290 GLN 291 ASP 292 TYR 293 THR 294 ASP 295 ARG 296 ALA 297 LEU 298 THR 299 LEU 300 ILE 301 GLN 302 GLN 303 LEU 304 PRO 305 VAL 306 GLY 307 SER 308 ALA 309 GLN 310 GLN 311 SER 312 LEU 313 GLU 314 GLN 315 LEU 316 THR 317 ARG 318 LEU 319 LEU 320 LEU 321 ARG 322 ARG 323 ASP 324

Unit 2

LEU 1 ASP 2 ARG 3 GLN 4 LEU 5 TRP 6 ARG 7 GLN 8 PHE 9 PRO 10 GLN 11 VAL 12 GLU 13 PRO 14 GLN 15 LEU 16 THR 17 ALA 18 LEU 19 GLN 20 ASP 21 TYR 22 LEU 23 LEU 24 ARG 25 THR 26 VAL 27 GLN 28 LEU 29 ASP 30 ASN 31 GLN 32 PRO 33 ILE 34 HIS 35 HIS 36 LYS 37 ILE 38 LEU 39 ALA 40 LEU 41 LEU 42 LYS 43 SER 44 GLY 45 GLY 46 LYS 47 LEU 48 LEU 49 ARG 50 PRO 51 GLY 52 TYR 53 PHE 54 TYR 55 LEU 56 PHE 57 SER 58 THR 59 PHE 60 GLY 61 ASN 62 ALA 63 ALA 64 THR 65 PRO 66 ALA 67 GLN 68 LEU 69 GLN 70 ALA 71 GLY 72 ALA 73 ALA 74 ALA 75 ILE 76 GLU 77 ILE 78 LEU 79 HIS 80 VAL 81 GLY 82 THR 83 LEU 84 ILE 85 HIS 86 ASP 87 ASP 88 VAL 89 ILE 90 THR 105 TYR 106 GLY 107 GLN 108 ARG 109 ASN 110 ALA 111 ILE 112 TYR 113 ALA 114 GLY 115 ASP 116 PHE 117 MET 118 PHE 119 THR 120 VAL 121 TYR 122 PHE 123 ASP 124 GLN 125 VAL 126 LEU 127 LYS 128 SER 129 THR 130 THR 131 ASP 132 ARG 133 SER 134 LEU 135 ILE 136 GLN 137 ASN 138 HIS 139 ILE 140 ASP 141 ALA 142 MET 143 HIS 144 ARG 145 ILE 146 LEU 147 GLN 148 GLY 149 GLU 150 LEU 151 HIS 152 GLN 153 MET 154 ASP 155 LEU 156 ASN 157 TYR 158 ARG 159 GLU 160 ASP 161 ILE 162 THR 163 LEU 164 ASP 165 ALA 166 TYR 167 LEU 168 ASN 169 GLU 170 ILE 171 ALA 172 GLY 173 LYS 174 THR 175 ALA 176 GLU 177 LEU 178 PHE 179 ALA 180 LEU 181 SER 182 CYS 183 TYR 184 GLN 185 GLY 186 ALA 187 GLN 188 LEU 189 ALA 190 GLY 191 ALA 192 PRO 193 GLN 194 SER 195 VAL 196 ILE 197 ASP 198 ARG 199 THR 200 ARG 201 ASP 202 ILE 203 GLY 204 ILE 205 ALA 206 ILE 207 GLY 208 CYS 209 ALA 210 TYR 211 GLN 212 MET 213 LEU 214 ASP 215 ASP 216 ILE 217 LEU 218 ASP 219 TYR 220 ALA 221 GLY 222 ASP 223 PRO 224 LYS 225 ARG 226 THR 227 GLN 228 LYS 229 PRO 230 VAL 231 LEU 232 GLU 233 ASP 234 LEU 235 ARG 236 SER 237 GLY 238 VAL 239 TYR 240 SER 241 LEU 242 PRO 243 LEU 244 LEU 245 LEU 246 SER 247 LEU 248 SER 249 HIS 250 ALA 251 PRO 252 ARG 253 ASP 254 PHE 255 HIS 256 LYS 257 LEU 258 LEU 259 LYS 260 LYS 261 LYS 262 GLN 263 ALA 264 MET 265 THR 266 LEU 267 GLU 268 ASP 269 ILE 270 LYS 271 HIS 272 VAL 273 GLN 274 ALA 275 LEU 276 VAL 277 ALA 278 GLN 279 TYR 280 ASP 281 GLY 282 VAL 283 GLY 284 ALA 285 ALA 286 LYS 287 GLN 288 LEU 289 ALA 290 GLN 291 ASP 292 TYR 293 THR 294 ASP 295 ARG 296 ALA 297 LEU 298 THR 299 LEU 300 ILE 301 GLN 302 GLN 303 LEU 304 PRO 305 VAL 306 GLY 307 SER 308 ALA 309 GLN 310 GLN 311 SER 312 LEU 313 GLU 314 GLN 315 LEU 316 THR 317 ARG 318 LEU 319 LEU 320 LEU 321 ARG 322 ARG 323 ASP 324

Ligands

Unit 3

CIT 326 GOL 327