3PK0 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR MYCOBACTERIUM SMEGMATIS
• Keywords: SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CEN INFECTIOUS DISEASE, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3PK0	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	A	260	1820	0
2	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	B	262	1839	0
3	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	C	262	1823	0
4	Protein	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	D	259	1811	0
5	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	A	5	0	16
6	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	B	5	0	15
7	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	C	4	0	14
8	Ligand	SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR	D	4	0	14
9	Water			878	0	878
total				1939	7293	937

Proteins

Unit 1	GLY -1 SER 0 MET 1 PHE 2 ASP 3 LEU 4 GLN 5 GLY 6 ARG 7 SER 8 VAL 9 VAL 10 VAL 11 THR 12 GLY 13 GLY 14 THR 15 LYS 16 GLY 17 ILE 18 GLY 19 ARG 20 GLY 21 ILE 22 ALA 23 THR 24 VAL 25 PHE 26 ALA 27 ARG 28 ALA 29 GLY 30 ALA 31 ASN 32 VAL 33 ALA 34 VAL 35 ALA 36 GLY 37 ARG 38 SER 39 THR 40 ALA 41 ASP 42 ILE 43 ASP 44 ALA 45 CYS 46 VAL 47 ALA 48 ASP 49 LEU 50 ASP 51 GLN 52 LEU 53 GLY 54 SER 55 GLY 56 LYS 57 VAL 58 ILE 59 GLY 60 VAL 61 GLN 62 THR 63 ASP 64 VAL 65 SER 66 ASP 67 ARG 68 ALA 69 GLN 70 CYS 71 ASP 72 ALA 73 LEU 74 ALA 75 GLY 76 ARG 77 ALA 78 VAL 79 GLU 80 GLU 81 PHE 82 GLY 83 GLY 84 ILE 85 ASP 86 VAL 87 VAL 88 CYS 89 ALA 90 ASN 91 ALA 92 GLY 93 VAL 94 PHE 95 PRO 96 ASP 97 ALA 98 PRO 99 LEU 100 ALA 101 THR 102 MET 103 THR 104 PRO 105 GLU 106 GLN 107 LEU 108 ASN 109 GLY 110 ILE 111 PHE 112 ALA 113 VAL 114 ASN 115 VAL 116 ASN 117 GLY 118 THR 119 PHE 120 TYR 121 ALA 122 VAL 123 GLN 124 ALA 125 CYS 126 LEU 127 ASP 128 ALA 129 LEU 130 ILE 131 ALA 132 SER 133 GLY 134 SER 135 GLY 136 ARG 137 VAL 138 VAL 139 LEU 140 THR 141 SER 142 SER 143 ILE 144 THR 145 GLY 146 PRO 147 ILE 148 THR 149 GLY 150 TYR 151 PRO 152 GLY 153 TRP 154 SER 155 HIS 156 TYR 157 GLY 158 ALA 159 THR 160 LYS 161 ALA 162 ALA 163 GLN 164 LEU 165 GLY 166 PHE 167 MET 168 ARG 169 THR 170 ALA 171 ALA 172 ILE 173 GLU 174 LEU 175 ALA 176 PRO 177 HIS 178 LYS 179 ILE 180 THR 181 VAL 182 ASN 183 ALA 184 ILE 185 MET 186 PRO 187 GLY 188 ASN 189 ILE 190 MET 191 THR 192 GLU 193 GLY 194 LEU 195 LEU 196 GLU 197 ASN 198 GLY 199 GLU 200 GLU 201 TYR 202 ILE 203 ALA 204 SER 205 MET 206 ALA 207 ARG 208 SER 209 ILE 210 PRO 211 ALA 212 GLY 213 ALA 214 LEU 215 GLY 216 THR 217 PRO 218 GLU 219 ASP 220 ILE 221 GLY 222 HIS 223 LEU 224 ALA 225 ALA 226 PHE 227 LEU 228 ALA 229 THR 230 LYS 231 GLU 232 ALA 233 GLY 234 TYR 235 ILE 236 THR 237 GLY 238 GLN 239 ALA 240 ILE 241 ALA 242 VAL 243 ASP 244 GLY 245 GLY 246 GLN 247 VAL 248 LEU 249 PRO 250 GLU 251 SER 252 LEU 253 ASP 254 ALA 255 ILE 256 ALA 257 THR 258
Unit 2	GLY -3 PRO -2 GLY -1 SER 0 MET 1 PHE 2 ASP 3 LEU 4 GLN 5 GLY 6 ARG 7 SER 8 VAL 9 VAL 10 VAL 11 THR 12 GLY 13 GLY 14 THR 15 LYS 16 GLY 17 ILE 18 GLY 19 ARG 20 GLY 21 ILE 22 ALA 23 THR 24 VAL 25 PHE 26 ALA 27 ARG 28 ALA 29 GLY 30 ALA 31 ASN 32 VAL 33 ALA 34 VAL 35 ALA 36 GLY 37 ARG 38 SER 39 THR 40 ALA 41 ASP 42 ILE 43 ASP 44 ALA 45 CYS 46 VAL 47 ALA 48 ASP 49 LEU 50 ASP 51 GLN 52 LEU 53 GLY 54 SER 55 GLY 56 LYS 57 VAL 58 ILE 59 GLY 60 VAL 61 GLN 62 THR 63 ASP 64 VAL 65 SER 66 ASP 67 ARG 68 ALA 69 GLN 70 CYS 71 ASP 72 ALA 73 LEU 74 ALA 75 GLY 76 ARG 77 ALA 78 VAL 79 GLU 80 GLU 81 PHE 82 GLY 83 GLY 84 ILE 85 ASP 86 VAL 87 VAL 88 CYS 89 ALA 90 ASN 91 ALA 92 GLY 93 VAL 94 PHE 95 PRO 96 ASP 97 ALA 98 PRO 99 LEU 100 ALA 101 THR 102 MET 103 THR 104 PRO 105 GLU 106 GLN 107 LEU 108 ASN 109 GLY 110 ILE 111 PHE 112 ALA 113 VAL 114 ASN 115 VAL 116 ASN 117 GLY 118 THR 119 PHE 120 TYR 121 ALA 122 VAL 123 GLN 124 ALA 125 CYS 126 LEU 127 ASP 128 ALA 129 LEU 130 ILE 131 ALA 132 SER 133 GLY 134 SER 135 GLY 136 ARG 137 VAL 138 VAL 139 LEU 140 THR 141 SER 142 SER 143 ILE 144 THR 145 GLY 146 PRO 147 ILE 148 THR 149 GLY 150 TYR 151 PRO 152 GLY 153 TRP 154 SER 155 HIS 156 TYR 157 GLY 158 ALA 159 THR 160 LYS 161 ALA 162 ALA 163 GLN 164 LEU 165 GLY 166 PHE 167 MET 168 ARG 169 THR 170 ALA 171 ALA 172 ILE 173 GLU 174 LEU 175 ALA 176 PRO 177 HIS 178 LYS 179 ILE 180 THR 181 VAL 182 ASN 183 ALA 184 ILE 185 MET 186 PRO 187 GLY 188 ASN 189 ILE 190 MET 191 THR 192 GLU 193 GLY 194 LEU 195 LEU 196 GLU 197 ASN 198 GLY 199 GLU 200 GLU 201 TYR 202 ILE 203 ALA 204 SER 205 MET 206 ALA 207 ARG 208 SER 209 ILE 210 PRO 211 ALA 212 GLY 213 ALA 214 LEU 215 GLY 216 THR 217 PRO 218 GLU 219 ASP 220 ILE 221 GLY 222 HIS 223 LEU 224 ALA 225 ALA 226 PHE 227 LEU 228 ALA 229 THR 230 LYS 231 GLU 232 ALA 233 GLY 234 TYR 235 ILE 236 THR 237 GLY 238 GLN 239 ALA 240 ILE 241 ALA 242 VAL 243 ASP 244 GLY 245 GLY 246 GLN 247 VAL 248 LEU 249 PRO 250 GLU 251 SER 252 LEU 253 ASP 254 ALA 255 ILE 256 ALA 257 THR 258
Unit 3	GLY -3 PRO -2 GLY -1 SER 0 MET 1 PHE 2 ASP 3 LEU 4 GLN 5 GLY 6 ARG 7 SER 8 VAL 9 VAL 10 VAL 11 THR 12 GLY 13 GLY 14 THR 15 LYS 16 GLY 17 ILE 18 GLY 19 ARG 20 GLY 21 ILE 22 ALA 23 THR 24 VAL 25 PHE 26 ALA 27 ARG 28 ALA 29 GLY 30 ALA 31 ASN 32 VAL 33 ALA 34 VAL 35 ALA 36 GLY 37 ARG 38 SER 39 THR 40 ALA 41 ASP 42 ILE 43 ASP 44 ALA 45 CYS 46 VAL 47 ALA 48 ASP 49 LEU 50 ASP 51 GLN 52 LEU 53 GLY 54 SER 55 GLY 56 LYS 57 VAL 58 ILE 59 GLY 60 VAL 61 GLN 62 THR 63 ASP 64 VAL 65 SER 66 ASP 67 ARG 68 ALA 69 GLN 70 CYS 71 ASP 72 ALA 73 LEU 74 ALA 75 GLY 76 ARG 77 ALA 78 VAL 79 GLU 80 GLU 81 PHE 82 GLY 83 GLY 84 ILE 85 ASP 86 VAL 87 VAL 88 CYS 89 ALA 90 ASN 91 ALA 92 GLY 93 VAL 94 PHE 95 PRO 96 ASP 97 ALA 98 PRO 99 LEU 100 ALA 101 THR 102 MET 103 THR 104 PRO 105 GLU 106 GLN 107 LEU 108 ASN 109 GLY 110 ILE 111 PHE 112 ALA 113 VAL 114 ASN 115 VAL 116 ASN 117 GLY 118 THR 119 PHE 120 TYR 121 ALA 122 VAL 123 GLN 124 ALA 125 CYS 126 LEU 127 ASP 128 ALA 129 LEU 130 ILE 131 ALA 132 SER 133 GLY 134 SER 135 GLY 136 ARG 137 VAL 138 VAL 139 LEU 140 THR 141 SER 142 SER 143 ILE 144 THR 145 GLY 146 PRO 147 ILE 148 THR 149 GLY 150 TYR 151 PRO 152 GLY 153 TRP 154 SER 155 HIS 156 TYR 157 GLY 158 ALA 159 THR 160 LYS 161 ALA 162 ALA 163 GLN 164 LEU 165 GLY 166 PHE 167 MET 168 ARG 169 THR 170 ALA 171 ALA 172 ILE 173 GLU 174 LEU 175 ALA 176 PRO 177 HIS 178 LYS 179 ILE 180 THR 181 VAL 182 ASN 183 ALA 184 ILE 185 MET 186 PRO 187 GLY 188 ASN 189 ILE 190 MET 191 THR 192 GLU 193 GLY 194 LEU 195 LEU 196 GLU 197 ASN 198 GLY 199 GLU 200 GLU 201 TYR 202 ILE 203 ALA 204 SER 205 MET 206 ALA 207 ARG 208 SER 209 ILE 210 PRO 211 ALA 212 GLY 213 ALA 214 LEU 215 GLY 216 THR 217 PRO 218 GLU 219 ASP 220 ILE 221 GLY 222 HIS 223 LEU 224 ALA 225 ALA 226 PHE 227 LEU 228 ALA 229 THR 230 LYS 231 GLU 232 ALA 233 GLY 234 TYR 235 ILE 236 THR 237 GLY 238 GLN 239 ALA 240 ILE 241 ALA 242 VAL 243 ASP 244 GLY 245 GLY 246 GLN 247 VAL 248 LEU 249 PRO 250 GLU 251 SER 252 LEU 253 ASP 254 ALA 255 ILE 256 ALA 257 THR 258
Unit 4	SER 0 MET 1 PHE 2 ASP 3 LEU 4 GLN 5 GLY 6 ARG 7 SER 8 VAL 9 VAL 10 VAL 11 THR 12 GLY 13 GLY 14 THR 15 LYS 16 GLY 17 ILE 18 GLY 19 ARG 20 GLY 21 ILE 22 ALA 23 THR 24 VAL 25 PHE 26 ALA 27 ARG 28 ALA 29 GLY 30 ALA 31 ASN 32 VAL 33 ALA 34 VAL 35 ALA 36 GLY 37 ARG 38 SER 39 THR 40 ALA 41 ASP 42 ILE 43 ASP 44 ALA 45 CYS 46 VAL 47 ALA 48 ASP 49 LEU 50 ASP 51 GLN 52 LEU 53 GLY 54 SER 55 GLY 56 LYS 57 VAL 58 ILE 59 GLY 60 VAL 61 GLN 62 THR 63 ASP 64 VAL 65 SER 66 ASP 67 ARG 68 ALA 69 GLN 70 CYS 71 ASP 72 ALA 73 LEU 74 ALA 75 GLY 76 ARG 77 ALA 78 VAL 79 GLU 80 GLU 81 PHE 82 GLY 83 GLY 84 ILE 85 ASP 86 VAL 87 VAL 88 CYS 89 ALA 90 ASN 91 ALA 92 GLY 93 VAL 94 PHE 95 PRO 96 ASP 97 ALA 98 PRO 99 LEU 100 ALA 101 THR 102 MET 103 THR 104 PRO 105 GLU 106 GLN 107 LEU 108 ASN 109 GLY 110 ILE 111 PHE 112 ALA 113 VAL 114 ASN 115 VAL 116 ASN 117 GLY 118 THR 119 PHE 120 TYR 121 ALA 122 VAL 123 GLN 124 ALA 125 CYS 126 LEU 127 ASP 128 ALA 129 LEU 130 ILE 131 ALA 132 SER 133 GLY 134 SER 135 GLY 136 ARG 137 VAL 138 VAL 139 LEU 140 THR 141 SER 142 SER 143 ILE 144 THR 145 GLY 146 PRO 147 ILE 148 THR 149 GLY 150 TYR 151 PRO 152 GLY 153 TRP 154 SER 155 HIS 156 TYR 157 GLY 158 ALA 159 THR 160 LYS 161 ALA 162 ALA 163 GLN 164 LEU 165 GLY 166 PHE 167 MET 168 ARG 169 THR 170 ALA 171 ALA 172 ILE 173 GLU 174 LEU 175 ALA 176 PRO 177 HIS 178 LYS 179 ILE 180 THR 181 VAL 182 ASN 183 ALA 184 ILE 185 MET 186 PRO 187 GLY 188 ASN 189 ILE 190 MET 191 THR 192 GLU 193 GLY 194 LEU 195 LEU 196 GLU 197 ASN 198 GLY 199 GLU 200 GLU 201 TYR 202 ILE 203 ALA 204 SER 205 MET 206 ALA 207 ARG 208 SER 209 ILE 210 PRO 211 ALA 212 GLY 213 ALA 214 LEU 215 GLY 216 THR 217 PRO 218 GLU 219 ASP 220 ILE 221 GLY 222 HIS 223 LEU 224 ALA 225 ALA 226 PHE 227 LEU 228 ALA 229 THR 230 LYS 231 GLU 232 ALA 233 GLY 234 TYR 235 ILE 236 THR 237 GLY 238 GLN 239 ALA 240 ILE 241 ALA 242 VAL 243 ASP 244 GLY 245 GLY 246 GLN 247 VAL 248 LEU 249 PRO 250 GLU 251 SER 252 LEU 253 ASP 254 ALA 255 ILE 256 ALA 257 THR 258

Ligands

Unit 5	PEG 265 CA 270 CL 275 CA 280 GOL 285
Unit 6	GOL 267 CA 270 CL 275 CA 280 GOL 285
Unit 7	GOL 267 CL 275 CA 280 GOL 285
Unit 8	GOL 267 CL 275 CA 280 GOL 285