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Title | CRYSTAL STRUCTURE OF HUMAN SPERM-SPECIFIC GLYCERALDEHYDE-3-P DEHYDROGENASE (GAPDS) COMPLEX WITH NAD, A BINARY FORM | |
Keywords | STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, OXIDOREDUCTASE, SPERM-SPECIFIC ISOZYME | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3PFW | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | O | 336 | 2569 | 0 | |
2 | Protein | P | 336 | 2569 | 0 | |
3 | Ligand | O | 4 | 0 | 62 | |
4 | Ligand | P | 3 | 0 | 56 | |
5 | Water | 303 | 0 | 303 | ||
total | 982 | 5138 | 421 |
Unit 1 | ARG74 GLU75 LEU76 THR77 VAL78 GLY79 ILE80 ASN81 GLY82 PHE83 GLY84 ARG85 ILE86 GLY87 ARG88 LEU89 VAL90 LEU91 ARG92 ALA93 CYS94 MET95 GLU96 LYS97 GLY98 VAL99 LYS100 VAL101 VAL102 ALA103 VAL104 ASN105 ASP106 PRO107 PHE108 ILE109 ASP110 PRO111 GLU112 TYR113 MET114 VAL115 TYR116 MET117 PHE118 LYS119 TYR120 ASP121 SER122 THR123 HIS124 GLY125 ARG126 TYR127 LYS128 GLY129 SER130 VAL131 GLU132 PHE133 ARG134 ASN135 GLY136 GLN137 LEU138 VAL139 VAL140 ASP141 ASN142 HIS143 GLU144 ILE145 SER146 VAL147 TYR148 GLN149 CYS150 LYS151 GLU152 PRO153 LYS154 GLN155 ILE156 PRO157 TRP158 ARG159 ALA160 VAL161 GLY162 SER163 PRO164 TYR165 VAL166 VAL167 GLU168 SER169 THR170 GLY171 VAL172 TYR173 LEU174 SER175 ILE176 GLN177 ALA178 ALA179 SER180 ASP181 HIS182 ILE183 SER184 ALA185 GLY186 ALA187 GLN188 ARG189 VAL190 VAL191 ILE192 SER193 ALA194 PRO195 SER196 PRO197 ASP198 ALA199 PRO200 MET201 PHE202 VAL203 MET204 GLY205 VAL206 ASN207 GLU208 ASN209 ASP210 TYR211 ASN212 PRO213 GLY214 SER215 MET216 ASN217 ILE218 VAL219 SER220 ASN221 ALA222 SER223 CYS224 THR225 THR226 ASN227 CYS228 LEU229 ALA230 PRO231 LEU232 ALA233 LYS234 VAL235 ILE236 HIS237 GLU238 ARG239 PHE240 GLY241 ILE242 VAL243 GLU244 GLY245 LEU246 MET247 THR248 THR249 VAL250 HIS251 SER252 TYR253 THR254 ALA255 THR256 GLN257 LYS258 THR259 VAL260 ASP261 GLY262 PRO263 SER264 ARG265 LYS266 ALA267 TRP268 ARG269 ASP270 GLY271 ARG272 GLY273 ALA274 HIS275 GLN276 ASN277 ILE278 ILE279 PRO280 ALA281 SER282 THR283 GLY284 ALA285 ALA286 LYS287 ALA288 VAL289 THR290 LYS291 VAL292 ILE293 PRO294 GLU295 LEU296 LYS297 GLY298 LYS299 LEU300 THR301 GLY302 MET303 ALA304 PHE305 ARG306 VAL307 PRO308 THR309 PRO310 ASP311 VAL312 SER313 VAL314 VAL315 ASP316 LEU317 THR318 CYS319 ARG320 LEU321 ALA322 GLN323 PRO324 ALA325 PRO326 TYR327 SER328 ALA329 ILE330 LYS331 GLU332 ALA333 VAL334 LYS335 ALA336 ALA337 ALA338 LYS339 GLY340 PRO341 MET342 ALA343 GLY344 ILE345 LEU346 ALA347 TYR348 THR349 GLU350 ASP351 GLU352 VAL353 VAL354 SER355 THR356 ASP357 PHE358 LEU359 GLY360 ASP361 THR362 HIS363 SER364 SER365 ILE366 PHE367 ASP368 ALA369 LYS370 ALA371 GLY372 ILE373 ALA374 LEU375 ASN376 ASP377 ASN378 PHE379 VAL380 LYS381 LEU382 ILE383 SER384 TRP385 TYR386 ASP387 ASN388 GLU389 TYR390 GLY391 TYR392 SER393 HIS394 ARG395 VAL396 VAL397 ASP398 LEU399 LEU400 ARG401 TYR402 MET403 PHE404 SER405 ARG406 ASP407 ALA408 GLU409 |
Unit 2 | ARG74 GLU75 LEU76 THR77 VAL78 GLY79 ILE80 ASN81 GLY82 PHE83 GLY84 ARG85 ILE86 GLY87 ARG88 LEU89 VAL90 LEU91 ARG92 ALA93 CYS94 MET95 GLU96 LYS97 GLY98 VAL99 LYS100 VAL101 VAL102 ALA103 VAL104 ASN105 ASP106 PRO107 PHE108 ILE109 ASP110 PRO111 GLU112 TYR113 MET114 VAL115 TYR116 MET117 PHE118 LYS119 TYR120 ASP121 SER122 THR123 HIS124 GLY125 ARG126 TYR127 LYS128 GLY129 SER130 VAL131 GLU132 PHE133 ARG134 ASN135 GLY136 GLN137 LEU138 VAL139 VAL140 ASP141 ASN142 HIS143 GLU144 ILE145 SER146 VAL147 TYR148 GLN149 CYS150 LYS151 GLU152 PRO153 LYS154 GLN155 ILE156 PRO157 TRP158 ARG159 ALA160 VAL161 GLY162 SER163 PRO164 TYR165 VAL166 VAL167 GLU168 SER169 THR170 GLY171 VAL172 TYR173 LEU174 SER175 ILE176 GLN177 ALA178 ALA179 SER180 ASP181 HIS182 ILE183 SER184 ALA185 GLY186 ALA187 GLN188 ARG189 VAL190 VAL191 ILE192 SER193 ALA194 PRO195 SER196 PRO197 ASP198 ALA199 PRO200 MET201 PHE202 VAL203 MET204 GLY205 VAL206 ASN207 GLU208 ASN209 ASP210 TYR211 ASN212 PRO213 GLY214 SER215 MET216 ASN217 ILE218 VAL219 SER220 ASN221 ALA222 SER223 CYS224 THR225 THR226 ASN227 CYS228 LEU229 ALA230 PRO231 LEU232 ALA233 LYS234 VAL235 ILE236 HIS237 GLU238 ARG239 PHE240 GLY241 ILE242 VAL243 GLU244 GLY245 LEU246 MET247 THR248 THR249 VAL250 HIS251 SER252 TYR253 THR254 ALA255 THR256 GLN257 LYS258 THR259 VAL260 ASP261 GLY262 PRO263 SER264 ARG265 LYS266 ALA267 TRP268 ARG269 ASP270 GLY271 ARG272 GLY273 ALA274 HIS275 GLN276 ASN277 ILE278 ILE279 PRO280 ALA281 SER282 THR283 GLY284 ALA285 ALA286 LYS287 ALA288 VAL289 THR290 LYS291 VAL292 ILE293 PRO294 GLU295 LEU296 LYS297 GLY298 LYS299 LEU300 THR301 GLY302 MET303 ALA304 PHE305 ARG306 VAL307 PRO308 THR309 PRO310 ASP311 VAL312 SER313 VAL314 VAL315 ASP316 LEU317 THR318 CYS319 ARG320 LEU321 ALA322 GLN323 PRO324 ALA325 PRO326 TYR327 SER328 ALA329 ILE330 LYS331 GLU332 ALA333 VAL334 LYS335 ALA336 ALA337 ALA338 LYS339 GLY340 PRO341 MET342 ALA343 GLY344 ILE345 LEU346 ALA347 TYR348 THR349 GLU350 ASP351 GLU352 VAL353 VAL354 SER355 THR356 ASP357 PHE358 LEU359 GLY360 ASP361 THR362 HIS363 SER364 SER365 ILE366 PHE367 ASP368 ALA369 LYS370 ALA371 GLY372 ILE373 ALA374 LEU375 ASN376 ASP377 ASN378 PHE379 VAL380 LYS381 LEU382 ILE383 SER384 TRP385 TYR386 ASP387 ASN388 GLU389 TYR390 GLY391 TYR392 SER393 HIS394 ARG395 VAL396 VAL397 ASP398 LEU399 LEU400 ARG401 TYR402 MET403 PHE404 SER405 ARG406 ASP407 ALA408 GLU409 |
Unit 3 | GOL1 NAD2 GOL415 GOL416 |
Unit 4 | NAD1 GOL415 GOL416 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |