3PF7 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF BOXB WITH MALONATE BOUND TO THE DIIRON
• Keywords: DIIRON CENTER, EPOXIDASE, BENZOYL COENZYME A, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3PF7	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	BENZOYL-COA OXYGENASE COMPONENT B	A	477	7630	0
2	Protein	BENZOYL-COA OXYGENASE COMPONENT B	B	470	7488	0
3	Ligand	BENZOYL-COA OXYGENASE COMPONENT B	A	5	0	13
4	Ligand	BENZOYL-COA OXYGENASE COMPONENT B	B	4	0	12
5	Water			993	0	993
total				1949	15118	1018

Proteins

Unit 1

MET 1 ILE 2 ASN 3 TYR 4 SER 5 GLU 6 ARG 7 ILE 8 PRO 9 ASN 10 ASN 11 VAL 12 ASN 13 LEU 14 ASN 15 GLU 16 ASN 17 LYS 18 THR 19 LEU 20 GLN 21 ARG 22 ALA 23 LEU 24 GLU 25 GLN 26 TRP 27 GLN 28 PRO 29 SER 30 PHE 31 LEU 32 ASN 33 TRP 34 TRP 35 ASP 36 ASP 37 MET 38 GLY 39 PRO 40 GLU 41 ASN 42 SER 43 SER 44 ASN 45 TYR 46 ASP 47 VAL 48 TYR 49 LEU 50 ARG 51 THR 52 ALA 53 VAL 54 SER 55 VAL 56 ASP 57 PRO 58 LYS 59 GLY 60 TRP 61 ALA 62 ASP 63 PHE 64 GLY 65 TYR 66 VAL 67 LYS 68 MET 69 HIS 70 ASP 71 TYR 72 ARG 73 TRP 74 GLY 75 ILE 76 PHE 77 LEU 78 ALA 79 PRO 80 GLN 81 GLU 82 GLY 83 GLU 84 LYS 85 LYS 86 ILE 87 THR 88 PHE 89 GLY 90 GLU 91 HIS 92 LYS 93 GLY 94 GLN 95 ASP 96 VAL 97 TRP 98 GLN 99 GLU 100 VAL 101 PRO 102 GLY 103 GLU 104 TYR 105 ARG 106 SER 107 THR 108 LEU 109 ARG 110 ARG 111 ILE 112 ILE 113 VAL 114 THR 115 GLN 116 GLY 117 ASP 118 THR 119 GLU 120 PRO 121 ALA 122 SER 123 VAL 124 GLU 125 GLN 126 GLN 127 ARG 128 HIS 129 LEU 130 GLY 131 LEU 132 THR 133 ALA 134 PRO 135 SER 136 LEU 137 TYR 138 ASP 139 LEU 140 ARG 141 ASN 142 LEU 143 PHE 144 GLN 145 VAL 146 ASN 147 VAL 148 GLU 149 GLU 150 GLY 151 ARG 152 HIS 153 LEU 154 TRP 155 ALA 156 MET 157 VAL 158 TYR 159 LEU 160 LEU 161 HIS 162 ALA 163 HIS 164 PHE 165 GLY 166 ARG 167 ASP 168 GLY 169 ARG 170 GLU 171 GLU 172 GLY 173 GLU 174 ALA 175 LEU 176 LEU 177 GLU 178 ARG 179 ARG 180 SER 181 GLY 182 ASP 183 GLU 184 ASP 185 ASN 186 PRO 187 ARG 188 ILE 189 LEU 190 THR 191 ALA 192 PHE 193 ASN 194 GLU 195 LYS 196 THR 197 PRO 198 ASP 199 TRP 200 LEU 201 SER 202 PHE 203 PHE 204 MET 205 PHE 206 THR 207 PHE 208 ILE 209 THR 210 ASP 211 ARG 212 ASP 213 GLY 214 LYS 215 PHE 216 GLN 217 LEU 218 ALA 219 SER 220 LEU 221 ALA 222 GLU 223 SER 224 ALA 225 PHE 226 ASP 227 PRO 228 LEU 229 ALA 230 ARG 231 THR 232 CYS 233 LYS 234 PHE 235 MET 236 LEU 237 THR 238 GLU 239 GLU 240 ALA 241 HIS 242 HIS 243 LEU 244 PHE 245 VAL 246 GLY 247 GLU 248 SER 249 GLY 250 ILE 251 ALA 252 ARG 253 VAL 254 ILE 255 GLN 256 ARG 257 THR 258 CYS 259 GLU 260 VAL 261 MET 262 LYS 263 GLU 264 LEU 265 GLY 266 THR 267 ASP 268 ASP 269 PRO 270 ALA 271 LYS 272 LEU 273 ARG 274 ALA 275 ALA 276 GLY 277 VAL 278 ILE 279 ASP 280 LEU 281 PRO 282 THR 283 LEU 284 GLN 285 LYS 286 TYR 287 LEU 288 ASN 289 PHE 290 HIS 291 TYR 292 SER 293 VAL 294 THR 295 SER 296 ASP 297 LEU 298 TYR 299 GLY 300 ALA 301 GLU 302 ILE 303 SER 304 SER 305 ASN 306 ALA 307 ALA 308 THR 309 TYR 310 TYR 311 THR 312 ASN 313 GLY 314 LEU 315 LYS 316 GLY 317 ARG 318 PHE 319 GLU 320 GLU 321 GLU 322 LYS 323 ILE 324 GLY 325 ASP 326 ASP 327 HIS 328 LYS 329 LEU 330 GLN 331 ASN 332 SER 333 GLU 334 TYR 335 GLU 336 VAL 337 MET 338 ASP 339 VAL 340 ALA 341 GLY 342 ASP 343 LYS 344 ILE 345 LEU 346 THR 347 ARG 348 HIS 349 VAL 350 PRO 351 ALA 352 LEU 353 SER 354 ALA 355 LEU 356 ASN 357 GLU 358 ARG 359 LEU 360 ARG 361 ASP 362 ASP 363 TRP 364 ILE 365 THR 366 ASP 367 VAL 368 GLN 369 ALA 370 GLY 371 VAL 372 ASP 373 ARG 374 TRP 375 ASN 376 ARG 377 ILE 378 PRO 379 ALA 380 LYS 381 PHE 382 GLY 383 PHE 384 ASP 385 PHE 386 ARG 387 PHE 388 THR 389 LEU 390 PRO 391 HIS 392 LYS 393 GLY 394 PHE 395 HIS 396 ARG 397 LYS 398 ILE 399 GLY 400 MET 401 PHE 402 ALA 403 ASP 404 VAL 405 HIS 406 VAL 407 SER 408 PRO 409 ASP 410 GLY 411 ARG 412 LEU 413 ILE 414 SER 415 GLU 416 ALA 417 GLU 418 TRP 419 THR 420 HIS 421 GLN 422 HIS 423 LYS 424 ASN 425 TRP 426 LEU 427 PRO 428 THR 429 GLU 430 SER 431 ASP 432 ARG 433 LEU 434 TYR 435 VAL 436 HIS 437 SER 438 LEU 439 MET 440 GLY 441 ARG 442 CYS 443 LEU 444 GLU 445 PRO 446 GLY 447 LYS 448 PHE 449 ALA 450 ASN 451 TRP 452 ILE 453 ALA 454 ALA 455 PRO 456 ALA 457 ARG 458 GLY 459 ILE 460 ASN 461 ASN 462 GLN 463 PRO 464 VAL 465 ASN 466 PHE 467 GLU 468 TYR 469 VAL 470 ARG 471 PHE 472 ASN 473 TRP 474 SER 475 HIS 476 PRO 477

Unit 2

SER 5 GLU 6 ARG 7 ILE 8 PRO 9 ASN 10 ASN 11 VAL 12 ASN 13 LEU 14 ASN 15 GLU 16 ASN 17 LYS 18 THR 19 LEU 20 GLN 21 ARG 22 ALA 23 LEU 24 GLU 25 GLN 26 TRP 27 GLN 28 PRO 29 SER 30 PHE 31 LEU 32 ASN 33 TRP 34 TRP 35 ASP 36 ASP 37 MET 38 GLY 39 PRO 40 GLU 41 ASN 42 SER 43 SER 44 ASN 45 TYR 46 ASP 47 VAL 48 TYR 49 LEU 50 ARG 51 THR 52 ALA 53 VAL 54 SER 55 VAL 56 ASP 57 PRO 58 LYS 59 GLY 60 TRP 61 ALA 62 ASP 63 PHE 64 GLY 65 TYR 66 VAL 67 LYS 68 MET 69 HIS 70 ASP 71 TYR 72 ARG 73 TRP 74 GLY 75 ILE 76 PHE 77 LEU 78 ALA 79 PRO 80 GLN 81 GLU 82 GLY 83 GLU 84 LYS 85 LYS 86 ILE 87 THR 88 PHE 89 GLY 90 GLU 91 HIS 92 LYS 93 GLY 94 GLN 95 ASP 96 VAL 97 TRP 98 GLN 99 GLU 100 VAL 101 PRO 102 GLY 103 GLU 104 TYR 105 ARG 106 SER 107 THR 108 LEU 109 ARG 110 ARG 111 ILE 112 ILE 113 VAL 114 THR 115 GLN 116 GLY 117 ASP 118 THR 119 GLU 120 PRO 121 ALA 122 SER 123 VAL 124 GLU 125 GLN 126 GLN 127 ARG 128 HIS 129 LEU 130 GLY 131 LEU 132 THR 133 ALA 134 PRO 135 SER 136 LEU 137 TYR 138 ASP 139 LEU 140 ARG 141 ASN 142 LEU 143 PHE 144 GLN 145 VAL 146 ASN 147 VAL 148 GLU 149 GLU 150 GLY 151 ARG 152 HIS 153 LEU 154 TRP 155 ALA 156 MET 157 VAL 158 TYR 159 LEU 160 LEU 161 HIS 162 ALA 163 HIS 164 PHE 165 GLY 166 ARG 167 ASP 168 GLY 169 ARG 170 GLU 171 GLU 172 GLY 173 GLU 174 ALA 175 LEU 176 LEU 177 GLU 178 ARG 179 ARG 180 SER 181 GLY 182 ASP 183 GLU 184 ASP 185 ASN 186 PRO 187 ARG 188 ILE 189 LEU 190 THR 191 ALA 192 PHE 193 ASN 194 GLU 195 LYS 196 THR 197 PRO 198 ASP 199 TRP 200 LEU 201 SER 202 PHE 203 PHE 204 MET 205 PHE 206 THR 207 PHE 208 ILE 209 THR 210 ASP 211 ARG 212 ASP 213 GLY 214 LYS 215 PHE 216 GLN 217 LEU 218 ALA 219 SER 220 LEU 221 ALA 222 GLU 223 SER 224 ALA 225 PHE 226 ASP 227 PRO 228 LEU 229 ALA 230 ARG 231 THR 232 CYS 233 LYS 234 PHE 235 MET 236 LEU 237 THR 238 GLU 239 GLU 240 ALA 241 HIS 242 HIS 243 LEU 244 PHE 245 VAL 246 GLY 247 GLU 248 SER 249 GLY 250 ILE 251 ALA 252 ARG 253 VAL 254 ILE 255 GLN 256 ARG 257 THR 258 CYS 259 GLU 260 VAL 261 MET 262 LYS 263 GLU 264 LEU 265 GLY 266 THR 267 ASP 268 ASP 269 PRO 270 ALA 271 LYS 272 LEU 273 ARG 274 ALA 275 ALA 276 GLY 277 VAL 278 ILE 279 ASP 280 LEU 281 PRO 282 THR 283 LEU 284 GLN 285 LYS 286 TYR 287 LEU 288 ASN 289 PHE 290 HIS 291 TYR 292 SER 293 VAL 294 THR 295 SER 296 ASP 297 LEU 298 TYR 299 GLY 300 ALA 301 GLU 302 ILE 303 SER 304 SER 305 ASN 306 ALA 307 ALA 308 THR 309 TYR 310 TYR 311 THR 312 ASN 313 GLY 314 LEU 315 LYS 316 GLY 317 ARG 318 PHE 319 GLU 320 GLU 321 GLU 322 LYS 323 ILE 324 GLY 325 ASP 326 ASP 327 HIS 328 LYS 329 LEU 330 GLN 331 ASN 332 SER 333 GLU 334 TYR 335 GLU 336 VAL 337 MET 338 ASP 339 VAL 340 ALA 341 GLY 342 ASP 343 LYS 344 ILE 345 LEU 346 THR 347 ARG 348 HIS 349 VAL 350 PRO 351 ALA 352 LEU 353 SER 354 ALA 355 LEU 356 ASN 357 GLU 358 ARG 359 LEU 360 ARG 361 ASP 362 ASP 363 TRP 364 ILE 365 THR 366 ASP 367 VAL 368 GLN 369 ALA 370 GLY 371 VAL 372 ASP 373 ARG 374 TRP 375 ASN 376 ARG 377 ILE 378 PRO 379 ALA 380 LYS 381 PHE 382 GLY 383 PHE 384 ASP 385 PHE 386 ARG 387 PHE 388 THR 389 LEU 390 PRO 391 HIS 392 LYS 393 GLY 394 PHE 395 HIS 396 ARG 397 LYS 398 ILE 399 GLY 400 MET 401 PHE 402 ALA 403 ASP 404 VAL 405 HIS 406 VAL 407 SER 408 PRO 409 ASP 410 GLY 411 ARG 412 LEU 413 ILE 414 SER 415 GLU 416 ALA 417 GLU 418 TRP 419 THR 420 HIS 421 GLN 422 HIS 423 LYS 424 ASN 425 TRP 426 LEU 427 PRO 428 THR 429 GLU 430 SER 431 ASP 432 ARG 433 LEU 434 TYR 435 VAL 436 HIS 437 SER 438 LEU 439 MET 440 GLY 441 ARG 442 CYS 443 LEU 444 GLU 445 PRO 446 GLY 447 LYS 448 PHE 449 ALA 450 ASN 451 TRP 452 ILE 453 ALA 454 ALA 455 PRO 456 ALA 457 ARG 458 GLY 459 ILE 460 ASN 461 ASN 462 GLN 463 PRO 464 VAL 465 ASN 466 PHE 467 GLU 468 TYR 469 VAL 470 ARG 471 PHE 472 ASN 473 TRP 474

Ligands

Unit 3	CL 482 FE 1001 FE 1002 OH 1003 MLA 1004
Unit 4	FE 1001 FE 1002 OH 1003 MLA 1004