3PDC - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HYDROLASE DOMAIN OF HUMAN SOLUBLE EPOXI HYDROLASE COMPLEXED WITH A BENZOXAZOLE INHIBITOR
• Keywords: EPOXIDE HYDROLASE, HYDROLASE, HYPERTENSION, BETA BARREL, ALP HYDROLASE FOLD; EPOXIDE HYDROLASE FOLD, ACTS ON EPOXIDES (A OXIDES, OXIRANES) AND ARENE OXIDES. PLAYS A ROLE IN XENOBIO METABOLISM BY DEGRADING POTENTIALLY TOXIC EPOXIDES. ALSO DE STEADY-STATE LEVELS OF PHYSIOLOGICAL MEDIATORS. HAS LOW PHO ACTIVITY, BINDS MG2+, ACETYLATION OF LYSINE, CYTOPLASM; PER HYDROLASE-HYDROLASE INHIBITOR COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3PDC	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	EPOXIDE HYDROLASE 2	A	323	2598	0
2	Protein	EPOXIDE HYDROLASE 2	B	323	2598	0
3	Ligand	EPOXIDE HYDROLASE 2	A	1	0	19
4	Ligand	EPOXIDE HYDROLASE 2	B	1	0	19
5	Water			191	0	191
total				839	5196	229

Proteins

Unit 1

ALA 224 PRO 225 LEU 226 PRO 227 THR 228 SER 229 CYS 230 ASN 231 PRO 232 SER 233 ASP 234 MET 235 SER 236 HIS 237 GLY 238 TYR 239 VAL 240 THR 241 VAL 242 LYS 243 PRO 244 ARG 245 VAL 246 ARG 247 LEU 248 HIS 249 PHE 250 VAL 251 GLU 252 LEU 253 GLY 254 SER 255 GLY 256 PRO 257 ALA 258 VAL 259 CYS 260 LEU 261 CYS 262 HIS 263 GLY 264 PHE 265 PRO 266 GLU 267 SER 268 TRP 269 TYR 270 SER 271 TRP 272 ARG 273 TYR 274 GLN 275 ILE 276 PRO 277 ALA 278 LEU 279 ALA 280 GLN 281 ALA 282 GLY 283 TYR 284 ARG 285 VAL 286 LEU 287 ALA 288 MET 289 ASP 290 MET 291 LYS 292 GLY 293 TYR 294 GLY 295 GLU 296 SER 297 SER 298 ALA 299 PRO 300 PRO 301 GLU 302 ILE 303 GLU 304 GLU 305 TYR 306 CYS 307 MET 308 GLU 309 VAL 310 LEU 311 CYS 312 LYS 313 GLU 314 MET 315 VAL 316 THR 317 PHE 318 LEU 319 ASP 320 LYS 321 LEU 322 GLY 323 LEU 324 SER 325 GLN 326 ALA 327 VAL 328 PHE 329 ILE 330 GLY 331 HIS 332 ASP 333 TRP 334 GLY 335 GLY 336 MET 337 LEU 338 VAL 339 TRP 340 TYR 341 MET 342 ALA 343 LEU 344 PHE 345 TYR 346 PRO 347 GLU 348 ARG 349 VAL 350 ARG 351 ALA 352 VAL 353 ALA 354 SER 355 LEU 356 ASN 357 THR 358 PRO 359 PHE 360 ILE 361 PRO 362 ALA 363 ASN 364 PRO 365 ASN 366 MET 367 SER 368 PRO 369 LEU 370 GLU 371 SER 372 ILE 373 LYS 374 ALA 375 ASN 376 PRO 377 VAL 378 PHE 379 ASP 380 TYR 381 GLN 382 LEU 383 TYR 384 PHE 385 GLN 386 GLU 387 PRO 388 GLY 389 VAL 390 ALA 391 GLU 392 ALA 393 GLU 394 LEU 395 GLU 396 GLN 397 ASN 398 LEU 399 SER 400 ARG 401 THR 402 PHE 403 LYS 404 SER 405 LEU 406 PHE 407 ARG 408 ALA 409 SER 410 ASP 411 GLU 412 SER 413 VAL 415 LEU 416 SER 417 MET 418 HIS 419 LYS 420 VAL 421 CYS 422 GLU 423 ALA 424 GLY 425 GLY 426 LEU 427 PHE 428 VAL 429 ASN 430 SER 431 PRO 432 GLU 433 GLU 434 PRO 435 SER 436 LEU 437 SER 438 ARG 439 MET 440 VAL 441 THR 442 GLU 443 GLU 444 GLU 445 ILE 446 GLN 447 PHE 448 TYR 449 VAL 450 GLN 451 GLN 452 PHE 453 LYS 454 LYS 455 SER 456 GLY 457 PHE 458 ARG 459 GLY 460 PRO 461 LEU 462 ASN 463 TRP 464 TYR 465 ARG 466 ASN 467 MET 468 GLU 469 ARG 470 ASN 471 TRP 472 LYS 473 TRP 474 ALA 475 CYS 476 LYS 477 SER 478 LEU 479 GLY 480 ARG 481 LYS 482 ILE 483 LEU 484 ILE 485 PRO 486 ALA 487 LEU 488 MET 489 VAL 490 THR 491 ALA 492 GLU 493 LYS 494 ASP 495 PHE 496 VAL 497 LEU 498 VAL 499 PRO 500 GLN 501 MET 502 SER 503 GLN 504 HIS 505 MET 506 GLU 507 ASP 508 TRP 509 ILE 510 PRO 511 HIS 512 LEU 513 LYS 514 ARG 515 GLY 516 HIS 517 ILE 518 GLU 519 ASP 520 CYS 521 GLY 522 HIS 523 TRP 524 THR 525 GLN 526 MET 527 ASP 528 LYS 529 PRO 530 THR 531 GLU 532 VAL 533 ASN 534 GLN 535 ILE 536 LEU 537 ILE 538 LYS 539 TRP 540 LEU 541 ASP 542 SER 543 ASP 544 ALA 545 ARG 546 ASN 547

Unit 2

ALA 224 PRO 225 LEU 226 PRO 227 THR 228 SER 229 CYS 230 ASN 231 PRO 232 SER 233 ASP 234 MET 235 SER 236 HIS 237 GLY 238 TYR 239 VAL 240 THR 241 VAL 242 LYS 243 PRO 244 ARG 245 VAL 246 ARG 247 LEU 248 HIS 249 PHE 250 VAL 251 GLU 252 LEU 253 GLY 254 SER 255 GLY 256 PRO 257 ALA 258 VAL 259 CYS 260 LEU 261 CYS 262 HIS 263 GLY 264 PHE 265 PRO 266 GLU 267 SER 268 TRP 269 TYR 270 SER 271 TRP 272 ARG 273 TYR 274 GLN 275 ILE 276 PRO 277 ALA 278 LEU 279 ALA 280 GLN 281 ALA 282 GLY 283 TYR 284 ARG 285 VAL 286 LEU 287 ALA 288 MET 289 ASP 290 MET 291 LYS 292 GLY 293 TYR 294 GLY 295 GLU 296 SER 297 SER 298 ALA 299 PRO 300 PRO 301 GLU 302 ILE 303 GLU 304 GLU 305 TYR 306 CYS 307 MET 308 GLU 309 VAL 310 LEU 311 CYS 312 LYS 313 GLU 314 MET 315 VAL 316 THR 317 PHE 318 LEU 319 ASP 320 LYS 321 LEU 322 GLY 323 LEU 324 SER 325 GLN 326 ALA 327 VAL 328 PHE 329 ILE 330 GLY 331 HIS 332 ASP 333 TRP 334 GLY 335 GLY 336 MET 337 LEU 338 VAL 339 TRP 340 TYR 341 MET 342 ALA 343 LEU 344 PHE 345 TYR 346 PRO 347 GLU 348 ARG 349 VAL 350 ARG 351 ALA 352 VAL 353 ALA 354 SER 355 LEU 356 ASN 357 THR 358 PRO 359 PHE 360 ILE 361 PRO 362 ALA 363 ASN 364 PRO 365 ASN 366 MET 367 SER 368 PRO 369 LEU 370 GLU 371 SER 372 ILE 373 LYS 374 ALA 375 ASN 376 PRO 377 VAL 378 PHE 379 ASP 380 TYR 381 GLN 382 LEU 383 TYR 384 PHE 385 GLN 386 GLU 387 PRO 388 GLY 389 VAL 390 ALA 391 GLU 392 ALA 393 GLU 394 LEU 395 GLU 396 GLN 397 ASN 398 LEU 399 SER 400 ARG 401 THR 402 PHE 403 LYS 404 SER 405 LEU 406 PHE 407 ARG 408 ALA 409 SER 410 ASP 411 GLU 412 SER 413 VAL 415 LEU 416 SER 417 MET 418 HIS 419 LYS 420 VAL 421 CYS 422 GLU 423 ALA 424 GLY 425 GLY 426 LEU 427 PHE 428 VAL 429 ASN 430 SER 431 PRO 432 GLU 433 GLU 434 PRO 435 SER 436 LEU 437 SER 438 ARG 439 MET 440 VAL 441 THR 442 GLU 443 GLU 444 GLU 445 ILE 446 GLN 447 PHE 448 TYR 449 VAL 450 GLN 451 GLN 452 PHE 453 LYS 454 LYS 455 SER 456 GLY 457 PHE 458 ARG 459 GLY 460 PRO 461 LEU 462 ASN 463 TRP 464 TYR 465 ARG 466 ASN 467 MET 468 GLU 469 ARG 470 ASN 471 TRP 472 LYS 473 TRP 474 ALA 475 CYS 476 LYS 477 SER 478 LEU 479 GLY 480 ARG 481 LYS 482 ILE 483 LEU 484 ILE 485 PRO 486 ALA 487 LEU 488 MET 489 VAL 490 THR 491 ALA 492 GLU 493 LYS 494 ASP 495 PHE 496 VAL 497 LEU 498 VAL 499 PRO 500 GLN 501 MET 502 SER 503 GLN 504 HIS 505 MET 506 GLU 507 ASP 508 TRP 509 ILE 510 PRO 511 HIS 512 LEU 513 LYS 514 ARG 515 GLY 516 HIS 517 ILE 518 GLU 519 ASP 520 CYS 521 GLY 522 HIS 523 TRP 524 THR 525 GLN 526 MET 527 ASP 528 LYS 529 PRO 530 THR 531 GLU 532 VAL 533 ASN 534 GLN 535 ILE 536 LEU 537 ILE 538 LYS 539 TRP 540 LEU 541 ASP 542 SER 543 ASP 544 ALA 545 ARG 546 ASN 547

Ligands

Unit 3	ZYI 1
Unit 4	ZYI 2