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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE PCNA:RNASE HII COMPLEX FROM ARCHAEOGLOBUS F
Keywords DNA CLAMP, RNASE H FOLD, CLEAVES RNA/DNA HYBRIDS, NUCLEUS, H DNA BINDING PROTEIN COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3P83     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA POLYMERASE SLIDING CLAMP  A 244 1895 0
2  Protein   DNA POLYMERASE SLIDING CLAMP  B 244 1894 0
3  Protein   DNA POLYMERASE SLIDING CLAMP  C 243 1881 0
4  Protein   RIBONUCLEASE HII  D 213 1665 0
5  Protein   RIBONUCLEASE HII  E 202 1564 0
6  Protein   RIBONUCLEASE HII  F 205 1566 0
total       1351 10465 0
Proteins
Unit 1 MET1 ILE2 ASP3 VAL4 ILE5 MET6 THR7 GLY8 GLU9 LEU10 LEU11 LYS12 THR13 VAL14 THR15 ARG16 ALA17 ILE18 VAL19 ALA20 LEU21 VAL22 SER23 GLU24 ALA25 ARG26 ILE27 HIS28 PHE29 LEU30 GLU31 LYS32 GLY33 LEU34 HIS35 SER36 ARG37 ALA38 VAL39 ASP40 PRO41 ALA42 ASN43 VAL44 ALA45 MET46 VAL47 ILE48 VAL49 ASP50 ILE51 PRO52 LYS53 ASP54 SER55 PHE56 GLU57 VAL58 TYR59 ASN60 ILE61 ASP62 GLU63 GLU64 LYS65 THR66 ILE67 GLY68 VAL69 ASP70 MET71 ASP72 ARG73 ILE74 PHE75 ASP76 ILE77 SER78 LYS79 SER80 ILE81 SER82 THR83 LYS84 ASP85 LEU86 VAL87 GLU88 LEU89 ILE90 VAL91 GLU92 ASP93 GLU94 SER95 THR96 LEU97 LYS98 VAL99 LYS100 PHE101 GLY102 SER103 VAL104 GLU105 TYR106 LYS107 VAL108 ALA109 LEU110 ILE111 ASP112 PRO113 SER114 ALA115 ILE116 ARG117 LYS118 GLU119 PRO120 ARG121 ILE122 PRO123 GLU124 LEU125 GLU126 LEU127 PRO128 ALA129 LYS130 ILE131 VAL132 MET133 ASP134 ALA135 GLY136 GLU137 PHE138 LYS139 LYS140 ALA141 ILE142 ALA143 ALA144 ALA145 ASP146 LYS147 ILE148 SER149 ASP150 GLN151 VAL152 ILE153 PHE154 ARG155 SER156 ASP157 LYS158 GLU159 GLY160 PHE161 ARG162 ILE163 GLU164 ALA165 LYS166 GLY167 ASP168 VAL169 ASP170 SER171 ILE172 VAL173 PHE174 HIS175 MET176 THR177 GLU178 THR179 GLU180 LEU181 ILE182 GLU183 PHE184 ASN185 GLY186 GLY187 GLU188 ALA189 ARG190 SER191 MET192 PHE193 SER194 VAL195 ASP196 TYR197 LEU198 LYS199 GLU200 PHE201 CYS202 LYS203 VAL204 ALA205 GLY206 SER207 GLY208 ASP209 LEU210 LEU211 THR212 ILE213 HIS214 LEU215 GLY216 THR217 ASN218 TYR219 PRO220 VAL221 ARG222 LEU223 VAL224 PHE225 GLU226 LEU227 VAL228 GLY229 GLY230 ARG231 ALA232 LYS233 VAL234 GLU235 TYR236 ILE237 LEU238 ALA239 PRO240 ARG241 ILE242 GLU243 SER244
Unit 2 MET1 ILE2 ASP3 VAL4 ILE5 MET6 THR7 GLY8 GLU9 LEU10 LEU11 LYS12 THR13 VAL14 THR15 ARG16 ALA17 ILE18 VAL19 ALA20 LEU21 VAL22 SER23 GLU24 ALA25 ARG26 ILE27 HIS28 PHE29 LEU30 GLU31 LYS32 GLY33 LEU34 HIS35 SER36 ARG37 ALA38 VAL39 ASP40 PRO41 ALA42 ASN43 VAL44 ALA45 MET46 VAL47 ILE48 VAL49 ASP50 ILE51 PRO52 LYS53 ASP54 SER55 PHE56 GLU57 VAL58 TYR59 ASN60 ILE61 ASP62 GLU63 GLU64 LYS65 THR66 ILE67 GLY68 VAL69 ASP70 MET71 ASP72 ARG73 ILE74 PHE75 ASP76 ILE77 SER78 LYS79 SER80 ILE81 SER82 THR83 LYS84 ASP85 LEU86 VAL87 GLU88 LEU89 ILE90 VAL91 GLU92 ASP93 GLU94 SER95 THR96 LEU97 LYS98 VAL99 LYS100 PHE101 GLY102 SER103 VAL104 GLU105 TYR106 LYS107 VAL108 ALA109 LEU110 ILE111 ASP112 PRO113 SER114 ALA115 ILE116 ARG117 LYS118 GLU119 PRO120 ARG121 ILE122 PRO123 GLU124 LEU125 GLU126 LEU127 PRO128 ALA129 LYS130 ILE131 VAL132 MET133 ASP134 ALA135 GLY136 GLU137 PHE138 LYS139 LYS140 ALA141 ILE142 ALA143 ALA144 ALA145 ASP146 LYS147 ILE148 SER149 ASP150 GLN151 VAL152 ILE153 PHE154 ARG155 SER156 ASP157 LYS158 GLU159 GLY160 PHE161 ARG162 ILE163 GLU164 ALA165 LYS166 GLY167 ASP168 VAL169 ASP170 SER171 ILE172 VAL173 PHE174 HIS175 MET176 THR177 GLU178 THR179 GLU180 LEU181 ILE182 GLU183 PHE184 ASN185 GLY186 GLY187 GLU188 ALA189 ARG190 SER191 MET192 PHE193 SER194 VAL195 ASP196 TYR197 LEU198 LYS199 GLU200 PHE201 CYS202 LYS203 VAL204 ALA205 GLY206 SER207 GLY208 ASP209 LEU210 LEU211 THR212 ILE213 HIS214 LEU215 GLY216 THR217 ASN218 TYR219 PRO220 VAL221 ARG222 LEU223 VAL224 PHE225 GLU226 LEU227 VAL228 GLY229 GLY230 ARG231 ALA232 LYS233 VAL234 GLU235 TYR236 ILE237 LEU238 ALA239 PRO240 ARG241 ILE242 GLU243 SER244
Unit 3 MET1 ILE2 ASP3 VAL4 ILE5 MET6 THR7 GLY8 GLU9 LEU10 LEU11 LYS12 THR13 VAL14 THR15 ARG16 ALA17 ILE18 VAL19 ALA20 LEU21 VAL22 SER23 GLU24 ALA25 ARG26 ILE27 HIS28 PHE29 LEU30 GLU31 LYS32 GLY33 LEU34 HIS35 SER36 ARG37 ALA38 VAL39 ASP40 PRO41 ALA42 ASN43 VAL44 ALA45 MET46 VAL47 ILE48 VAL49 ASP50 ILE51 PRO52 LYS53 ASP54 SER55 PHE56 GLU57 VAL58 TYR59 ASN60 ILE61 ASP62 GLU63 GLU64 LYS65 THR66 ILE67 GLY68 VAL69 ASP70 MET71 ASP72 ARG73 ILE74 PHE75 ASP76 ILE77 SER78 LYS79 SER80 ILE81 SER82 THR83 LYS84 ASP85 LEU86 VAL87 GLU88 LEU89 ILE90 VAL91 GLU92 ASP93 GLU94 SER95 THR96 LEU97 LYS98 VAL99 LYS100 PHE101 GLY102 SER103 VAL104 GLU105 TYR106 LYS107 VAL108 ALA109 LEU110 ILE111 ASP112 PRO113 SER114 ALA115 ILE116 ARG117 LYS118 GLU119 PRO120 ARG121 ILE122 PRO123 GLU124 LEU125 GLU126 LEU127 PRO128 ALA129 LYS130 ILE131 VAL132 MET133 ASP134 ALA135 GLY136 GLU137 PHE138 LYS139 LYS140 ALA141 ILE142 ALA143 ALA144 ALA145 ASP146 LYS147 ILE148 SER149 ASP150 GLN151 VAL152 ILE153 PHE154 ARG155 SER156 ASP157 LYS158 GLU159 GLY160 PHE161 ARG162 ILE163 GLU164 ALA165 LYS166 GLY167 ASP168 VAL169 ASP170 SER171 ILE172 VAL173 PHE174 HIS175 MET176 THR177 GLU178 THR179 GLU180 LEU181 ILE182 GLU183 PHE184 ASN185 GLY186 GLY187 GLU188 ALA189 ARG190 SER191 MET192 PHE193 SER194 VAL195 ASP196 TYR197 LEU198 LYS199 GLU200 PHE201 CYS202 LYS203 VAL204 ALA205 GLY206 SER207 GLY208 ASP209 LEU210 LEU211 THR212 ILE213 HIS214 LEU215 GLY216 THR217 ASN218 TYR219 PRO220 VAL221 ARG222 LEU223 VAL224 PHE225 GLU226 LEU227 VAL228 GLY229 GLY230 ARG231 ALA232 LYS233 VAL234 GLU235 TYR236 ILE237 LEU238 ALA239 PRO240 ARG241 ILE242 GLU243
Unit 4 SER-7 PRO-6 GLU-5 PHE-4 PRO-3 GLY-2 ARG-1 LEU0 MET1 LYS2 ALA3 GLY4 ILE5 ASP6 GLU7 ALA8 GLY9 LYS10 GLY11 CYS12 VAL13 ILE14 GLY15 PRO16 LEU17 VAL18 VAL19 ALA20 GLY21 VAL22 ALA23 CYS24 SER25 ASP26 GLU27 ASP28 ARG29 LEU30 ARG31 LYS32 LEU33 GLY34 VAL35 LYS36 ASP37 SER38 LYS39 LYS40 LEU41 SER42 GLN43 GLY44 ARG45 ARG46 GLU47 GLU48 LEU49 ALA50 GLU51 GLU52 ILE53 ARG54 LYS55 ILE56 CYS57 ARG58 THR59 GLU60 VAL61 LEU62 LYS63 VAL64 SER65 PRO66 GLU67 ASN68 LEU69 ASP70 GLU71 ARG72 MET73 ALA74 ALA75 LYS76 THR77 ILE78 ASN79 GLU80 ILE81 LEU82 LYS83 GLU84 CYS85 TYR86 ALA87 GLU88 ILE89 ILE90 LEU91 ARG92 LEU93 LYS94 PRO95 GLU96 ILE97 ALA98 TYR99 VAL100 ASP101 SER102 PRO103 ASP104 VAL105 ILE106 PRO107 GLU108 ARG109 LEU110 SER111 ARG112 GLU113 LEU114 GLU115 GLU116 ILE117 THR118 GLY119 LEU120 ARG121 VAL122 VAL123 ALA124 GLU125 HIS126 LYS127 ALA128 ASP129 GLU130 LYS131 TYR132 PRO133 LEU134 VAL135 ALA136 ALA137 ALA138 SER139 ILE140 ILE141 ALA142 LYS143 VAL144 GLU145 ARG146 GLU147 ARG148 GLU149 ILE150 GLU151 ARG152 LEU153 LYS154 GLU155 LYS156 PHE157 GLY158 ASP159 PHE160 GLY161 SER162 GLY163 TYR164 ALA165 SER166 ASP167 PRO168 ARG169 THR170 ARG171 GLU172 VAL173 LEU174 LYS175 GLU176 TRP177 ILE178 ALA179 SER180 GLY181 ARG182 ILE183 PRO184 SER185 CYS186 VAL187 ARG188 MET189 ARG190 TRP191 LYS192 THR193 VAL194 SER195 ASN196 LEU197 ARG198 GLN199 LYS200 THR201 LEU202 ASP203 ASP204 PHE205
Unit 5 LEU0 MET1 LYS2 ALA3 GLY4 ILE5 ASP6 GLU7 ALA8 GLY9 LYS10 GLY11 CYS12 VAL13 ILE14 GLY15 PRO16 LEU17 VAL18 VAL19 ALA20 GLY21 VAL22 ALA23 CYS24 SER25 ASP26 GLU27 ASP28 ARG29 LEU30 ARG31 LYS32 LEU33 GLY34 VAL35 LYS36 ASP37 SER38 LYS39 LYS40 LEU41 SER42 GLN43 GLY44 ARG45 ARG46 GLU47 GLU48 LEU49 ALA50 GLU51 GLU52 ILE53 ARG54 LYS55 ILE56 CYS57 ARG58 THR59 GLU60 VAL61 LEU62 LYS63 VAL64 SER65 PRO66 GLU67 ASN68 LEU69 ASP70 GLU71 ARG72 MET73 ALA74 ALA75 LYS76 THR77 ILE78 ASN79 GLU80 ILE81 LEU82 LYS83 GLU84 CYS85 TYR86 ALA87 GLU88 ILE89 ILE90 LEU91 ARG92 LEU93 LYS94 PRO95 GLU96 ILE97 ALA98 TYR99 VAL100 ASP101 SER102 PRO103 ASP104 VAL105 ILE106 PRO107 GLU108 ARG109 LEU110 SER111 ARG112 GLU113 LEU114 GLU115 GLU116 ILE117 THR118 GLY119 LEU120 ARG121 VAL122 VAL123 ALA124 GLU125 HIS126 LYS127 ALA128 ASP129 GLU130 LYS131 TYR132 PRO133 LEU134 VAL135 ALA136 ALA137 ALA138 SER139 ILE140 ILE141 ALA142 LYS143 VAL144 GLU145 ARG146 GLU147 ARG148 GLU149 ILE150 GLU151 ARG152 LEU153 LYS154 GLU155 LYS156 PHE157 GLY158 ASP159 PHE160 GLY161 SER162 GLY163 TYR164 ALA165 SER166 ASP167 PRO168 ARG169 THR170 ARG171 GLU172 VAL173 LEU174 LYS175 GLU176 TRP177 ILE178 ALA179 SER180 GLY181 ARG182 ILE183 PRO184 SER185 CYS186 VAL187 ARG188 MET189 ARG190 TRP191 LYS192 LEU197 ARG198 GLN199 LYS200 THR201 LEU202 ASP203 ASP204 PHE205
Unit 6 MET1 LYS2 ALA3 GLY4 ILE5 ASP6 GLU7 ALA8 GLY9 LYS10 GLY11 CYS12 VAL13 ILE14 GLY15 PRO16 LEU17 VAL18 VAL19 ALA20 GLY21 VAL22 ALA23 CYS24 SER25 ASP26 GLU27 ASP28 ARG29 LEU30 ARG31 LYS32 LEU33 GLY34 VAL35 LYS36 ASP37 SER38 LYS39 LYS40 LEU41 SER42 GLN43 GLY44 ARG45 ARG46 GLU47 GLU48 LEU49 ALA50 GLU51 GLU52 ILE53 ARG54 LYS55 ILE56 CYS57 ARG58 THR59 GLU60 VAL61 LEU62 LYS63 VAL64 SER65 PRO66 GLU67 ASN68 LEU69 ASP70 GLU71 ARG72 MET73 ALA74 ALA75 LYS76 THR77 ILE78 ASN79 GLU80 ILE81 LEU82 LYS83 GLU84 CYS85 TYR86 ALA87 GLU88 ILE89 ILE90 LEU91 ARG92 LEU93 LYS94 PRO95 GLU96 ILE97 ALA98 TYR99 VAL100 ASP101 SER102 PRO103 ASP104 VAL105 ILE106 PRO107 GLU108 ARG109 LEU110 SER111 ARG112 GLU113 LEU114 GLU115 GLU116 ILE117 THR118 GLY119 LEU120 ARG121 VAL122 VAL123 ALA124 GLU125 HIS126 LYS127 ALA128 ASP129 GLU130 LYS131 TYR132 PRO133 LEU134 VAL135 ALA136 ALA137 ALA138 SER139 ILE140 ILE141 ALA142 LYS143 VAL144 GLU145 ARG146 GLU147 ARG148 GLU149 ILE150 GLU151 ARG152 LEU153 LYS154 GLU155 LYS156 PHE157 GLY158 ASP159 PHE160 GLY161 SER162 GLY163 TYR164 ALA165 SER166 ASP167 PRO168 ARG169 THR170 ARG171 GLU172 VAL173 LEU174 LYS175 GLU176 TRP177 ILE178 ALA179 SER180 GLY181 ARG182 ILE183 PRO184 SER185 CYS186 VAL187 ARG188 MET189 ARG190 TRP191 LYS192 THR193 VAL194 SER195 ASN196 LEU197 ARG198 GLN199 LYS200 THR201 LEU202 ASP203 ASP204 PHE205
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany