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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TAXADIENE SYNTHASE FROM PACIFIC YEW (TA BREVIFOLIA) IN COMPLEX WITH MG2+ AND 2-FLUOROGERANYLGERANYL DIPHOSPHATE
Keywords CLASS I AND II TERPENE CYCLASE FOLD, DITERPENE CYCLASE, DDXX NSE/DTE MOTIF, 2-FLUORO-GERANYLGERANYL DIPHOSPHATE, BIOSYNT PACLITAXEL, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3P5R     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TAXADIENE SYNTHASE  A 750 6062 0
2  Protein   TAXADIENE SYNTHASE  B 738 5962 0
3  Ligand   TAXADIENE SYNTHASE  A 4 0 33
4  Ligand   TAXADIENE SYNTHASE  B 4 0 33
5 Water     1206 0 1206
total       2702 12024 1272
Proteins
Unit 1 THR111 TYR112 GLN113 GLU114 ARG115 ALA116 ASP117 GLU118 LEU119 VAL120 VAL121 LYS122 ILE123 LYS124 ASP125 MET126 PHE127 ASN128 ALA129 LEU130 GLY131 ASP132 GLY133 ASP134 ILE135 SER136 PRO137 SER138 ALA139 TYR140 ASP141 THR142 ALA143 TRP144 VAL145 ALA146 ARG147 LEU148 ALA149 THR150 ILE151 SER152 SER153 ASP154 GLY155 SER156 GLU157 LYS158 PRO159 ARG160 PHE161 PRO162 GLN163 ALA164 LEU165 ASN166 TRP167 VAL168 PHE169 ASN170 ASN171 GLN172 LEU173 GLN174 ASP175 GLY176 SER177 TRP178 GLY179 ILE180 GLU181 SER182 HIS183 PHE184 SER185 LEU186 CYS187 ASP188 ARG189 LEU190 LEU191 ASN192 THR193 THR194 ASN195 SER196 VAL197 ILE198 ALA199 LEU200 SER201 VAL202 TRP203 LYS204 THR205 GLY206 HIS207 SER208 GLN209 VAL210 GLN211 GLN212 GLY213 ALA214 GLU215 PHE216 ILE217 ALA218 GLU219 ASN220 LEU221 ARG222 LEU223 LEU224 ASN225 GLU226 GLU227 ASP228 GLU229 LEU230 SER231 PRO232 ASP233 PHE234 GLN235 ILE236 ILE237 PHE238 PRO239 ALA240 LEU241 LEU242 GLN243 LYS244 ALA245 LYS246 ALA247 LEU248 GLY249 ILE250 ASN251 LEU252 PRO253 TYR254 ASP255 LEU256 PRO257 PHE258 ILE259 LYS260 TYR261 LEU262 SER263 THR264 THR265 ARG266 GLU267 ALA268 ARG269 LEU270 THR271 ASP272 VAL273 SER274 ALA275 ALA276 ALA277 ASP278 ASN279 ILE280 PRO281 ALA282 ASN283 MET284 LEU285 ASN286 ALA287 LEU288 GLU289 GLY290 LEU291 GLU292 GLU293 VAL294 ILE295 ASP296 TRP297 ASN298 LYS299 ILE300 MET301 ARG302 PHE303 GLN304 SER305 LYS306 ASP307 GLY308 SER309 PHE310 LEU311 SER312 SER313 PRO314 ALA315 SER316 THR317 ALA318 CYS319 VAL320 LEU321 MET322 ASN323 THR324 GLY325 ASP326 GLU327 LYS328 CYS329 PHE330 THR331 PHE332 LEU333 ASN334 ASN335 LEU336 LEU337 ASP338 LYS339 PHE340 GLY341 GLY342 CYS343 VAL344 PRO345 CYS346 MET347 TYR348 SER349 ILE350 ASP351 LEU352 LEU353 GLU354 ARG355 LEU356 SER357 LEU358 VAL359 ASP360 ASN361 ILE362 GLU363 HIS364 LEU365 GLY366 ILE367 GLY368 ARG369 HIS370 PHE371 LYS372 GLN373 GLU374 ILE375 LYS376 GLY377 ALA378 LEU379 ASP380 TYR381 VAL382 TYR383 ARG384 HIS385 TRP386 SER387 GLU388 ARG389 GLY390 ILE391 GLY392 TRP393 GLY394 ARG395 ASP396 SER397 LEU398 VAL399 PRO400 ASP401 LEU402 ASN403 THR404 THR405 ALA406 LEU407 GLY408 LEU409 ARG410 THR411 LEU412 ARG413 MET414 HIS415 GLY416 TYR417 ASN418 VAL419 SER420 SER421 ASP422 VAL423 LEU424 ASN425 ASN426 PHE427 LYS428 ASP429 GLU430 ASN431 GLY432 ARG433 PHE434 PHE435 SER436 SER437 ALA438 GLY439 GLN440 THR441 HIS442 VAL443 GLU444 LEU445 ARG446 SER447 VAL448 VAL449 ASN450 LEU451 PHE452 ARG453 ALA454 SER455 ASP456 LEU457 ALA458 PHE459 PRO460 ASP461 GLU462 ARG463 ALA464 MET465 ASP466 ASP467 ALA468 ARG469 LYS470 PHE471 ALA472 GLU473 PRO474 TYR475 LEU476 ARG477 GLU478 ALA479 LEU480 ALA481 THR482 LYS483 ILE484 SER485 THR486 ASN487 THR488 LYS489 LEU490 PHE491 LYS492 GLU493 ILE494 GLU495 TYR496 VAL497 VAL498 GLU499 TYR500 PRO501 TRP502 HIS503 MET504 SER505 ILE506 PRO507 ARG508 LEU509 GLU510 ALA511 ARG512 SER513 TYR514 ILE515 ASP516 SER517 TYR518 ASP519 ASP520 ASN521 TYR522 VAL523 TRP524 GLN525 ARG526 LYS527 THR528 LEU529 TYR530 ARG531 MET532 PRO533 SER534 LEU535 SER536 ASN537 SER538 LYS539 CYS540 LEU541 GLU542 LEU543 ALA544 LYS545 LEU546 ASP547 PHE548 ASN549 ILE550 VAL551 GLN552 SER553 LEU554 HIS555 GLN556 GLU557 GLU558 LEU559 LYS560 LEU561 LEU562 THR563 ARG564 TRP565 TRP566 LYS567 GLU568 SER569 GLY570 MET571 ALA572 ASP573 PHE576 THR577 ARG578 HIS579 ARG580 VAL581 ALA582 GLU583 VAL584 TYR585 PHE586 SER587 SER588 ALA589 THR590 PHE591 GLU592 PRO593 GLU594 TYR595 SER596 ALA597 THR598 ARG599 ILE600 ALA601 PHE602 THR603 LYS604 ILE605 GLY606 CYS607 LEU608 GLN609 VAL610 LEU611 PHE612 ASP613 ASP614 MET615 ALA616 ASP617 ILE618 PHE619 ALA620 THR621 LEU622 ASP623 GLU624 LEU625 LYS626 SER627 PHE628 THR629 GLU630 GLY631 VAL632 LYS633 ARG634 TRP635 ASP636 THR637 SER638 LEU639 LEU640 HIS641 GLU642 ILE643 PRO644 GLU645 CYS646 MET647 GLN648 THR649 CYS650 PHE651 LYS652 VAL653 TRP654 PHE655 LYS656 LEU657 MET658 GLU659 GLU660 VAL661 ASN662 ASN663 ASP664 VAL665 VAL666 LYS667 VAL668 GLN669 GLY670 ARG671 ASP672 MET673 LEU674 ALA675 HIS676 ILE677 ARG678 LYS679 PRO680 TRP681 GLU682 LEU683 TYR684 PHE685 ASN686 CYS687 TYR688 VAL689 GLN690 GLU691 ARG692 GLU693 TRP694 LEU695 GLU696 ALA697 GLY698 TYR699 ILE700 PRO701 THR702 PHE703 GLU704 GLU705 TYR706 LEU707 LYS708 THR709 TYR710 ALA711 ILE712 SER713 VAL714 GLY715 LEU716 GLY717 PRO718 CYS719 THR720 LEU721 GLN722 PRO723 ILE724 LEU725 LEU726 MET727 GLY728 GLU729 LEU730 VAL731 LYS732 ASP733 ASP734 VAL735 VAL736 GLU737 LYS738 VAL739 HIS740 TYR741 PRO742 SER743 ASN744 MET745 PHE746 GLU747 LEU748 VAL749 SER750 LEU751 SER752 TRP753 ARG754 LEU755 THR756 ASN757 ASP758 THR759 LYS760 THR761 TYR762 GLN763 ALA764 GLU765 LYS766 ALA767 ARG768 GLY769 GLN770 GLN771 ALA772 SER773 GLY774 ILE775 ALA776 CYS777 TYR778 MET779 LYS780 ASP781 ASN782 PRO783 GLY784 ALA785 THR786 GLU787 GLU788 ASP789 ALA790 ILE791 LYS792 HIS793 ILE794 CYS795 ARG796 VAL797 VAL798 ASP799 ARG800 ALA801 LEU802 LYS803 GLU804 ALA805 SER806 PHE807 GLU808 TYR809 PHE810 LYS811 PRO812 SER813 ASN814 ASP815 ILE816 PRO817 MET818 GLY819 CYS820 LYS821 SER822 PHE823 ILE824 PHE825 ASN826 LEU827 ARG828 LEU829 CYS830 VAL831 GLN832 ILE833 PHE834 TYR835 LYS836 PHE837 ILE838 ASP839 GLY840 TYR841 GLY842 ILE843 ALA844 ASN845 GLU846 GLU847 ILE848 LYS849 ASP850 TYR851 ILE852 ARG853 LYS854 VAL855 TYR856 ILE857 ASP858 PRO859 ILE860 GLN861 VAL862
Unit 2 THR111 TYR112 GLN113 GLU114 ARG115 ALA116 ASP117 GLU118 LEU119 VAL120 VAL121 LYS122 ILE123 LYS124 ASP125 MET126 PHE127 ASN128 ALA129 LEU130 GLY131 ASP132 GLY133 ASP134 ILE135 SER136 PRO137 SER138 ALA139 TYR140 ASP141 THR142 ALA143 TRP144 VAL145 ALA146 ARG147 LEU148 ALA149 THR150 ILE151 SER152 SER153 ASP154 GLY155 SER156 GLU157 LYS158 PRO159 ARG160 PHE161 PRO162 GLN163 ALA164 LEU165 ASN166 TRP167 VAL168 PHE169 ASN170 ASN171 GLN172 LEU173 GLN174 ASP175 GLY176 SER177 TRP178 GLY179 ILE180 GLU181 SER182 HIS183 PHE184 SER185 LEU186 CYS187 ASP188 ARG189 LEU190 LEU191 ASN192 THR193 THR194 ASN195 SER196 VAL197 ILE198 ALA199 LEU200 SER201 VAL202 TRP203 LYS204 THR205 GLY206 HIS207 SER208 GLN209 VAL210 GLN211 GLN212 GLY213 ALA214 GLU215 PHE216 ILE217 ALA218 GLU219 ASN220 LEU221 ARG222 LEU223 LEU224 ASN225 GLU226 GLU227 ASP228 GLU229 LEU230 SER231 PRO232 ASP233 PHE234 GLN235 ILE236 ILE237 PHE238 PRO239 ALA240 LEU241 LEU242 GLN243 LYS244 ALA245 LYS246 ALA247 LEU248 GLY249 ILE250 ASN251 LEU252 PRO253 TYR254 ASP255 LEU256 PRO257 PHE258 ILE259 LYS260 TYR261 LEU262 SER263 THR264 THR265 ARG266 GLU267 ALA268 ARG269 LEU270 THR271 ASP272 VAL273 SER274 ALA275 ALA276 ALA277 ASP278 ASN279 ILE280 PRO281 ALA282 ASN283 MET284 LEU285 ASN286 ALA287 LEU288 GLU289 GLY290 LEU291 GLU292 GLU293 VAL294 ILE295 ASP296 TRP297 ASN298 LYS299 ILE300 MET301 ARG302 PHE303 GLN304 SER305 LYS306 ASP307 GLY308 SER309 PHE310 LEU311 SER312 SER313 PRO314 ALA315 SER316 THR317 ALA318 CYS319 VAL320 LEU321 MET322 ASN323 THR324 GLY325 ASP326 GLU327 LYS328 CYS329 PHE330 THR331 PHE332 LEU333 ASN334 ASN335 LEU336 LEU337 ASP338 LYS339 PHE340 GLY341 GLY342 CYS343 VAL344 PRO345 CYS346 MET347 TYR348 SER349 ILE350 ASP351 LEU352 LEU353 GLU354 ARG355 LEU356 SER357 LEU358 VAL359 ASP360 ASN361 ILE362 GLU363 HIS364 LEU365 GLY366 ILE367 GLY368 ARG369 HIS370 PHE371 LYS372 GLN373 GLU374 ILE375 LYS376 GLY377 ALA378 LEU379 ASP380 TYR381 VAL382 TYR383 ARG384 HIS385 TRP386 SER387 GLU388 ARG389 GLY390 ILE391 GLY392 TRP393 GLY394 ARG395 ASP396 SER397 LEU398 VAL399 PRO400 ASP401 LEU402 ASN403 THR404 THR405 ALA406 LEU407 GLY408 LEU409 ARG410 THR411 LEU412 ARG413 MET414 HIS415 GLY416 TYR417 ASN418 VAL419 SER420 SER421 ASP422 VAL423 LEU424 ASN425 ASN426 PHE427 LYS428 ASP429 GLU430 ASN431 GLY432 ARG433 PHE434 PHE435 SER436 SER437 ALA438 GLY439 GLN440 THR441 HIS442 VAL443 GLU444 LEU445 ARG446 SER447 VAL448 VAL449 ASN450 LEU451 PHE452 ARG453 ALA454 SER455 ASP456 LEU457 ALA458 PHE459 PRO460 ASP461 GLU462 ARG463 ALA464 MET465 ASP466 ASP467 ALA468 ARG469 LYS470 PHE471 ALA472 GLU473 PRO474 TYR475 LEU476 ARG477 GLU478 ALA479 LEU480 ALA481 THR482 LYS483 ILE484 SER485 THR486 ASN487 THR488 LYS489 LEU490 PHE491 LYS492 GLU493 ILE494 GLU495 TYR496 VAL497 VAL498 GLU499 TYR500 PRO501 TRP502 HIS503 MET504 SER505 ILE506 PRO507 ARG508 LEU509 GLU510 ALA511 ARG512 SER513 TYR514 ILE515 ASP516 SER517 TYR518 ASP519 ASP520 ASN521 TYR522 VAL523 TRP524 GLN525 ARG526 LYS527 THR528 LEU529 TYR530 ARG531 MET532 PRO533 SER534 LEU535 SER536 ASN537 SER538 LYS539 CYS540 LEU541 GLU542 LEU543 ALA544 LYS545 LEU546 ASP547 PHE548 ASN549 ILE550 VAL551 GLN552 SER553 LEU554 HIS555 GLN556 GLU557 GLU558 LEU559 LYS560 LEU561 LEU562 THR563 ARG564 TRP565 TRP566 LYS567 GLU568 SER569 GLY570 MET571 ALA572 ASP573 ILE574 ASN575 ARG580 VAL581 ALA582 GLU583 VAL584 TYR585 PHE586 SER587 SER588 ALA589 THR590 PHE591 GLU592 PRO593 GLU594 TYR595 SER596 ALA597 THR598 ARG599 ILE600 ALA601 PHE602 THR603 LYS604 ILE605 GLY606 CYS607 LEU608 GLN609 VAL610 LEU611 PHE612 ASP613 ASP614 MET615 ALA616 ASP617 ILE618 PHE619 ALA620 THR621 LEU622 ASP623 GLU624 LEU625 LYS626 SER627 PHE628 THR629 GLU630 GLY631 VAL632 LYS633 ARG634 TRP635 ASP636 THR637 SER638 LEU639 LEU640 HIS641 GLU642 ILE643 PRO644 GLU645 CYS646 MET647 GLN648 THR649 CYS650 PHE651 LYS652 VAL653 TRP654 PHE655 LYS656 LEU657 MET658 GLU659 GLU660 VAL661 ASN662 ASN663 ASP664 VAL665 VAL666 LYS667 VAL668 GLN669 GLY670 ARG671 ASP672 MET673 LEU674 ALA675 HIS676 ILE677 ARG678 LYS679 PRO680 TRP681 GLU682 LEU683 TYR684 PHE685 ASN686 CYS687 TYR688 VAL689 GLN690 GLU691 ARG692 GLU693 TRP694 LEU695 GLU696 ALA697 GLY698 TYR699 ILE700 PRO701 THR702 PHE703 GLU704 GLU705 TYR706 LEU707 LYS708 THR709 TYR710 ALA711 ILE712 SER713 VAL714 GLY715 LEU716 GLY717 PRO718 CYS719 THR720 LEU721 GLN722 PRO723 ILE724 LEU725 LEU726 MET727 GLY728 GLU729 LEU730 VAL731 LYS732 ASP733 ASP734 VAL735 VAL736 GLU737 LYS738 VAL739 HIS740 TYR741 PRO742 SER743 ASN744 MET745 PHE746 GLU747 LEU748 VAL749 SER750 LEU751 SER752 TRP753 ARG754 LEU755 THR756 ASN757 ASP758 THR759 LYS760 THR761 TYR762 GLN763 ALA764 GLU765 LYS766 ALA767 ARG768 GLY769 GLN770 GLN771 ALA772 SER773 GLY774 ILE775 ALA776 CYS777 TYR778 MET779 LYS780 ASP781 ASN782 PRO783 GLY784 ALA785 THR786 GLU787 GLU788 ASP789 ALA790 ILE791 LYS792 HIS793 ILE794 CYS795 ARG796 VAL797 VAL798 ASP799 ARG800 ALA801 LEU802 LYS803 GLU804 ALA805 SER806 PHE807 GLU808 TYR809 PHE810 LYS811 PRO812 SER813 ASN814 ASP815 ILE816 PRO817 MET818 GLY819 CYS820 LYS821 SER822 PHE823 ILE824 PHE825 ASN826 LEU827 ARG828 LEU829 CYS830 VAL831 GLN832 ILE833 PHE834 TYR835 LYS836 GLU847 ILE848 LYS849 ASP850 TYR851 ILE852 ARG853 LYS854 VAL855 TYR856 ILE857 ASP858 PRO859 ILE860 GLN861 VAL862
Ligands
Unit 3 MG901 MG902 MG903 FGG911
Unit 4 MG901 MG902 MG903 FGG911
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany