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Sequence, Chains, Asymmetric and Biological Units

Title ALTERNATINGLY MODIFIED 2'FLUORO RNA OCTAMER F/RA2U2-R32
Keywords RNA, 2'-FLUORO-RNA O2'-MODIFICATION, OCTAMER, 2'-FLUORO 2'- DEOXYCYTIDINE, 2'-FLUORO 2'-DEOXYADENOSINE, 2'-FLUORO 2'- DEOXYURIDINE, SIRNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3P4C     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 8 88 79
2  RNA    B 8 88 79
3  Ligand   5'-R(*(CFZ)P*GP*(AF2)P*AP*(UFT)P*UP*(CFZ)P*G)-3'  B 3 0 3
4 Water     93 0 93
total       112 176 254

Nucleic acids
Unit 1 CFZ101 G102 AF2103 A104 UFT105 U106 CFZ107 G108
Unit 2 CFZ209 G210 AF2211 A212 UFT213 U214 CFZ215 G216

Ligands
Unit 3 SR301 SR302 SR303

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany