3P2K - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF AN ANTIBIOTIC RELATED METHYLTRANSFERASE
• Keywords: METHYLTRANSFERASE, TRANSFERASE, NPMA
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3P2K	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	16S RRNA METHYLASE	A	197	1571	0
2	Protein	16S RRNA METHYLASE	B	197	1571	0
3	Protein	16S RRNA METHYLASE	C	197	1571	0
4	Protein	16S RRNA METHYLASE	D	197	1566	0
5	Ligand	16S RRNA METHYLASE	A	1	0	27
6	Ligand	16S RRNA METHYLASE	B	1	0	27
7	Ligand	16S RRNA METHYLASE	C	1	0	27
8	Ligand	16S RRNA METHYLASE	D	1	0	27
9	Water			74	0	74
total				866	6279	182

Proteins

Unit 1	LEU 2 ILE 3 LEU 4 LYS 5 GLY 6 THR 7 LYS 8 THR 9 VAL 10 ASP 11 LEU 12 SER 13 LYS 14 ASP 15 GLU 16 LEU 17 THR 18 GLU 19 ILE 20 ILE 21 GLY 22 GLN 23 PHE 24 ASP 25 ARG 26 VAL 27 HIS 28 ILE 29 ASP 30 LEU 31 GLY 32 THR 33 GLY 34 ASP 35 GLY 36 ARG 37 ASN 38 ILE 39 TYR 40 LYS 41 LEU 42 ALA 43 ILE 44 ASN 45 ASP 46 GLN 47 ASN 48 THR 49 PHE 50 TYR 51 ILE 52 GLY 53 ILE 54 ASP 55 PRO 56 VAL 57 LYS 58 GLU 59 ASN 60 LEU 61 PHE 62 ASP 63 ILE 64 SER 65 LYS 66 LYS 67 ILE 68 ILE 69 LYS 70 LYS 71 PRO 72 SER 73 LYS 74 GLY 75 GLY 76 LEU 77 SER 78 ASN 79 VAL 80 VAL 81 PHE 82 VAL 83 ILE 84 ALA 85 ALA 86 ALA 87 GLU 88 SER 89 LEU 90 PRO 91 PHE 92 GLU 93 LEU 94 LYS 95 ASN 96 ILE 97 ALA 98 ASP 99 SER 100 ILE 101 SER 102 ILE 103 LEU 104 PHE 105 PRO 106 TRP 107 GLY 108 THR 109 LEU 110 LEU 111 GLU 112 TYR 113 VAL 114 ILE 115 LYS 116 PRO 117 ASN 118 ARG 119 ASP 120 ILE 121 LEU 122 SER 123 ASN 124 VAL 125 ALA 126 ASP 127 LEU 128 ALA 129 LYS 130 LYS 131 GLU 132 ALA 133 HIS 134 PHE 135 GLU 136 PHE 137 VAL 138 THR 139 THR 140 TYR 141 LYS 160 ALA 161 TYR 162 PHE 163 LEU 164 SER 165 GLU 166 GLN 167 TYR 168 LYS 169 ALA 170 GLU 171 LEU 172 SER 173 ASN 174 SER 175 GLY 176 PHE 177 ARG 178 ILE 179 ASP 180 ASP 181 VAL 182 LYS 183 GLU 184 LEU 185 ASP 186 ASN 187 GLU 188 TYR 189 VAL 190 LYS 191 GLN 192 PHE 193 ASN 194 SER 195 LEU 196 TRP 197 ALA 198 LYS 199 ARG 200 LEU 201 ALA 202 PHE 203 GLY 204 ARG 205 LYS 206 ARG 207 SER 208 PHE 209 PHE 210 ARG 211 VAL 212 SER 213 GLY 214 HIS 215 VAL 216
Unit 2	LEU 2 ILE 3 LEU 4 LYS 5 GLY 6 THR 7 LYS 8 THR 9 VAL 10 ASP 11 LEU 12 SER 13 LYS 14 ASP 15 GLU 16 LEU 17 THR 18 GLU 19 ILE 20 ILE 21 GLY 22 GLN 23 PHE 24 ASP 25 ARG 26 VAL 27 HIS 28 ILE 29 ASP 30 LEU 31 GLY 32 THR 33 GLY 34 ASP 35 GLY 36 ARG 37 ASN 38 ILE 39 TYR 40 LYS 41 LEU 42 ALA 43 ILE 44 ASN 45 ASP 46 GLN 47 ASN 48 THR 49 PHE 50 TYR 51 ILE 52 GLY 53 ILE 54 ASP 55 PRO 56 VAL 57 LYS 58 GLU 59 ASN 60 LEU 61 PHE 62 ASP 63 ILE 64 SER 65 LYS 66 LYS 67 ILE 68 ILE 69 LYS 70 LYS 71 PRO 72 SER 73 LYS 74 GLY 75 GLY 76 LEU 77 SER 78 ASN 79 VAL 80 VAL 81 PHE 82 VAL 83 ILE 84 ALA 85 ALA 86 ALA 87 GLU 88 SER 89 LEU 90 PRO 91 PHE 92 GLU 93 LEU 94 LYS 95 ASN 96 ILE 97 ALA 98 ASP 99 SER 100 ILE 101 SER 102 ILE 103 LEU 104 PHE 105 PRO 106 TRP 107 GLY 108 THR 109 LEU 110 LEU 111 GLU 112 TYR 113 VAL 114 ILE 115 LYS 116 PRO 117 ASN 118 ARG 119 ASP 120 ILE 121 LEU 122 SER 123 ASN 124 VAL 125 ALA 126 ASP 127 LEU 128 ALA 129 LYS 130 LYS 131 GLU 132 ALA 133 HIS 134 PHE 135 GLU 136 PHE 137 VAL 138 THR 139 THR 140 TYR 141 LYS 160 ALA 161 TYR 162 PHE 163 LEU 164 SER 165 GLU 166 GLN 167 TYR 168 LYS 169 ALA 170 GLU 171 LEU 172 SER 173 ASN 174 SER 175 GLY 176 PHE 177 ARG 178 ILE 179 ASP 180 ASP 181 VAL 182 LYS 183 GLU 184 LEU 185 ASP 186 ASN 187 GLU 188 TYR 189 VAL 190 LYS 191 GLN 192 PHE 193 ASN 194 SER 195 LEU 196 TRP 197 ALA 198 LYS 199 ARG 200 LEU 201 ALA 202 PHE 203 GLY 204 ARG 205 LYS 206 ARG 207 SER 208 PHE 209 PHE 210 ARG 211 VAL 212 SER 213 GLY 214 HIS 215 VAL 216
Unit 3	LEU 2 ILE 3 LEU 4 LYS 5 GLY 6 THR 7 LYS 8 THR 9 VAL 10 ASP 11 LEU 12 SER 13 LYS 14 ASP 15 GLU 16 LEU 17 THR 18 GLU 19 ILE 20 ILE 21 GLY 22 GLN 23 PHE 24 ASP 25 ARG 26 VAL 27 HIS 28 ILE 29 ASP 30 LEU 31 GLY 32 THR 33 GLY 34 ASP 35 GLY 36 ARG 37 ASN 38 ILE 39 TYR 40 LYS 41 LEU 42 ALA 43 ILE 44 ASN 45 ASP 46 GLN 47 ASN 48 THR 49 PHE 50 TYR 51 ILE 52 GLY 53 ILE 54 ASP 55 PRO 56 VAL 57 LYS 58 GLU 59 ASN 60 LEU 61 PHE 62 ASP 63 ILE 64 SER 65 LYS 66 LYS 67 ILE 68 ILE 69 LYS 70 LYS 71 PRO 72 SER 73 LYS 74 GLY 75 GLY 76 LEU 77 SER 78 ASN 79 VAL 80 VAL 81 PHE 82 VAL 83 ILE 84 ALA 85 ALA 86 ALA 87 GLU 88 SER 89 LEU 90 PRO 91 PHE 92 GLU 93 LEU 94 LYS 95 ASN 96 ILE 97 ALA 98 ASP 99 SER 100 ILE 101 SER 102 ILE 103 LEU 104 PHE 105 PRO 106 TRP 107 GLY 108 THR 109 LEU 110 LEU 111 GLU 112 TYR 113 VAL 114 ILE 115 LYS 116 PRO 117 ASN 118 ARG 119 ASP 120 ILE 121 LEU 122 SER 123 ASN 124 VAL 125 ALA 126 ASP 127 LEU 128 ALA 129 LYS 130 LYS 131 GLU 132 ALA 133 HIS 134 PHE 135 GLU 136 PHE 137 VAL 138 THR 139 THR 140 TYR 141 LYS 160 ALA 161 TYR 162 PHE 163 LEU 164 SER 165 GLU 166 GLN 167 TYR 168 LYS 169 ALA 170 GLU 171 LEU 172 SER 173 ASN 174 SER 175 GLY 176 PHE 177 ARG 178 ILE 179 ASP 180 ASP 181 VAL 182 LYS 183 GLU 184 LEU 185 ASP 186 ASN 187 GLU 188 TYR 189 VAL 190 LYS 191 GLN 192 PHE 193 ASN 194 SER 195 LEU 196 TRP 197 ALA 198 LYS 199 ARG 200 LEU 201 ALA 202 PHE 203 GLY 204 ARG 205 LYS 206 ARG 207 SER 208 PHE 209 PHE 210 ARG 211 VAL 212 SER 213 GLY 214 HIS 215 VAL 216
Unit 4	LEU 2 ILE 3 LEU 4 LYS 5 GLY 6 THR 7 LYS 8 THR 9 VAL 10 ASP 11 LEU 12 SER 13 LYS 14 ASP 15 GLU 16 LEU 17 THR 18 GLU 19 ILE 20 ILE 21 GLY 22 GLN 23 PHE 24 ASP 25 ARG 26 VAL 27 HIS 28 ILE 29 ASP 30 LEU 31 GLY 32 THR 33 GLY 34 ASP 35 GLY 36 ARG 37 ASN 38 ILE 39 TYR 40 LYS 41 LEU 42 ALA 43 ILE 44 ASN 45 ASP 46 GLN 47 ASN 48 THR 49 PHE 50 TYR 51 ILE 52 GLY 53 ILE 54 ASP 55 PRO 56 VAL 57 LYS 58 GLU 59 ASN 60 LEU 61 PHE 62 ASP 63 ILE 64 SER 65 LYS 66 LYS 67 ILE 68 ILE 69 LYS 70 LYS 71 PRO 72 SER 73 LYS 74 GLY 75 GLY 76 LEU 77 SER 78 ASN 79 VAL 80 VAL 81 PHE 82 VAL 83 ILE 84 ALA 85 ALA 86 ALA 87 GLU 88 SER 89 LEU 90 PRO 91 PHE 92 GLU 93 LEU 94 LYS 95 ASN 96 ILE 97 ALA 98 ASP 99 SER 100 ILE 101 SER 102 ILE 103 LEU 104 PHE 105 PRO 106 TRP 107 GLY 108 THR 109 LEU 110 LEU 111 GLU 112 TYR 113 VAL 114 ILE 115 LYS 116 PRO 117 ASN 118 ARG 119 ASP 120 ILE 121 LEU 122 SER 123 ASN 124 VAL 125 ALA 126 ASP 127 LEU 128 ALA 129 LYS 130 LYS 131 GLU 132 ALA 133 HIS 134 PHE 135 GLU 136 PHE 137 VAL 138 THR 139 THR 140 TYR 141 LYS 160 ALA 161 TYR 162 PHE 163 LEU 164 SER 165 GLU 166 GLN 167 TYR 168 LYS 169 ALA 170 GLU 171 LEU 172 SER 173 ASN 174 SER 175 GLY 176 PHE 177 ARG 178 ILE 179 ASP 180 ASP 181 VAL 182 LYS 183 GLU 184 LEU 185 ASP 186 ASN 187 GLU 188 TYR 189 VAL 190 LYS 191 GLN 192 PHE 193 ASN 194 SER 195 LEU 196 TRP 197 ALA 198 LYS 199 ARG 200 LEU 201 ALA 202 PHE 203 GLY 204 ARG 205 LYS 206 ARG 207 SER 208 PHE 209 PHE 210 ARG 211 VAL 212 SER 213 GLY 214 HIS 215 VAL 216

Ligands

Unit 5	SAM 6735
Unit 6	SAM 6735
Unit 7	SAM 6735
Unit 8	SAM 6735