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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ISOCITRATE LYASE FROM BRUCELLA MELITENS TO MAGNESIUM ISOCITRATE
Keywords SSGCID, LYASE, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOM CENTER FOR INFECTIOUS DISEASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3P0X     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ISOCITRATE LYASE  A 422 3229 0
2  Protein   ISOCITRATE LYASE  B 422 3217 0
3  Protein   ISOCITRATE LYASE  C 423 3222 0
4  Protein   ISOCITRATE LYASE  D 424 3211 0
5  Ligand   ISOCITRATE LYASE  A 4 0 22
6  Ligand   ISOCITRATE LYASE  B 2 0 17
7  Ligand   ISOCITRATE LYASE  C 1 0 4
8  Ligand   ISOCITRATE LYASE  B 1 0 1
9  Ligand   ISOCITRATE LYASE  C 2 0 17
10  Ligand   ISOCITRATE LYASE  D 1 0 4
11  Ligand   ISOCITRATE LYASE  C 1 0 1
12  Ligand   ISOCITRATE LYASE  D 2 0 14
13 Water     687 0 687
total       2392 12879 767

Proteins
Unit 1 ASP3 PHE4 TYR5 SER6 LEU7 ILE8 PRO9 SER10 ALA11 PRO12 LYS13 GLY14 ARG15 PHE16 ASP17 GLY18 ILE19 GLU20 ARG21 ALA22 HIS23 THR24 ALA25 GLU26 ASP27 VAL28 LYS29 ARG30 LEU31 ARG32 GLY33 SER34 VAL35 GLU36 ILE37 LYS38 TYR39 SER40 LEU41 ALA42 GLU43 MET44 GLY45 ALA46 ASN47 ARG48 LEU49 TRP50 LYS51 LEU52 ILE53 HIS54 GLU55 GLU56 ASP57 PHE58 VAL59 ASN60 ALA61 LEU62 GLY63 ALA64 LEU65 SER66 GLY67 ASN68 GLN69 ALA70 MET71 GLN72 MET73 VAL74 ARG75 ALA76 GLY77 LEU78 LYS79 ALA80 ILE81 TYR82 LEU83 SER84 GLY85 TRP86 GLN87 VAL88 ALA89 ALA90 ASP91 ALA92 ASN93 THR94 ALA95 SER96 ALA97 MET98 TYR99 PRO100 ASP101 GLN102 SER103 LEU104 TYR105 PRO106 ALA107 ASN108 ALA109 GLY110 PRO111 GLU112 LEU113 ALA114 LYS115 ARG116 ILE117 ASN118 ARG119 THR120 LEU121 GLN122 ARG123 ALA124 ASP125 GLN126 ILE127 GLU128 THR129 ALA130 GLU131 GLY132 LYS133 GLY134 LEU135 SER136 VAL137 ASP138 THR139 TRP140 PHE141 ALA142 PRO143 ILE144 VAL145 ALA146 ASP147 ALA148 GLU149 ALA150 GLY151 PHE152 GLY153 GLY154 PRO155 LEU156 ASP157 ALA158 PHE159 GLU160 ILE161 MET162 LYS163 ALA164 TYR165 ILE166 GLU167 ALA168 GLY169 ALA170 ALA171 GLY172 VAL173 HIS174 PHE175 GLU176 ASP177 GLN178 LEU179 ALA180 SER181 GLU182 LYS183 LYS184 CYS185 GLY186 HIS187 LEU188 GLY189 GLY190 LYS191 VAL192 LEU193 ILE194 PRO195 THR196 ALA197 ALA198 HIS199 ILE200 ARG201 ASN202 LEU203 ASN204 ALA205 ALA206 ARG207 LEU208 ALA209 ALA210 ASP211 VAL212 MET213 GLY214 THR215 PRO216 THR217 LEU218 ILE219 VAL220 ALA221 ARG222 THR223 ASP224 ALA225 GLU226 ALA227 ALA228 LYS229 LEU230 LEU231 THR232 SER233 ASP234 ILE235 ASP236 GLU237 ARG238 ASP239 GLN240 PRO241 PHE242 VAL243 ASP244 TYR245 GLU246 ALA247 GLY248 ARG249 THR250 ALA251 GLU252 GLY253 PHE254 TYR255 GLN256 VAL257 LYS258 ASN259 GLY260 ILE261 GLU262 PRO263 CYS264 ILE265 ALA266 ARG267 ALA268 ILE269 ALA270 TYR271 ALA272 PRO273 TYR274 CYS275 ASP276 LEU277 ILE278 TRP279 MET280 GLU281 THR282 SER283 LYS284 PRO285 ASP286 LEU287 ALA288 GLN289 ALA290 ARG291 ARG292 PHE293 ALA294 GLU295 ALA296 VAL297 HIS298 LYS299 ALA300 HIS301 PRO302 GLY303 LYS304 LEU305 LEU306 ALA307 TYR308 ASN309 CYS310 SER311 PRO312 SER313 PHE314 ASN315 TRP316 LYS317 LYS318 ASN319 LEU320 ASP321 ASP322 ALA323 THR324 ILE325 ALA326 LYS327 PHE328 GLN329 ARG330 GLU331 LEU332 GLY333 ALA334 MET335 GLY336 TYR337 LYS338 PHE339 GLN340 PHE341 ILE342 THR343 LEU344 ALA345 GLY346 PHE347 HIS348 GLN349 LEU350 ASN351 TYR352 GLY353 MET354 PHE355 GLU356 LEU357 ALA358 ARG359 GLY360 TYR361 LYS362 ASP363 ARG364 GLN365 MET366 ALA367 ALA368 TYR369 SER370 GLU371 LEU372 GLN373 GLN374 ALA375 GLU376 PHE377 ALA378 ALA379 GLU380 ALA381 ASP382 GLY383 TYR384 THR385 ALA386 THR387 LYS388 HIS389 GLN390 ARG391 GLU392 VAL393 GLY394 THR395 GLY396 TYR397 PHE398 ASP399 ALA400 VAL401 SER402 LEU403 ALA404 ILE405 THR406 GLY407 GLY408 GLN409 SER410 SER411 THR412 THR413 ALA414 MET415 LYS416 GLU417 SER418 THR419 GLU420 THR421 ALA422 GLN423 PHE424
Unit 2 ASP3 PHE4 TYR5 SER6 LEU7 ILE8 PRO9 SER10 ALA11 PRO12 LYS13 GLY14 ARG15 PHE16 ASP17 GLY18 ILE19 GLU20 ARG21 ALA22 HIS23 THR24 ALA25 GLU26 ASP27 VAL28 LYS29 ARG30 LEU31 ARG32 GLY33 SER34 VAL35 GLU36 ILE37 LYS38 TYR39 SER40 LEU41 ALA42 GLU43 MET44 GLY45 ALA46 ASN47 ARG48 LEU49 TRP50 LYS51 LEU52 ILE53 HIS54 GLU55 GLU56 ASP57 PHE58 VAL59 ASN60 ALA61 LEU62 GLY63 ALA64 LEU65 SER66 GLY67 ASN68 GLN69 ALA70 MET71 GLN72 MET73 VAL74 ARG75 ALA76 GLY77 LEU78 LYS79 ALA80 ILE81 TYR82 LEU83 SER84 GLY85 TRP86 GLN87 VAL88 ALA89 ALA90 ASP91 ALA92 ASN93 THR94 ALA95 SER96 ALA97 MET98 TYR99 PRO100 ASP101 GLN102 SER103 LEU104 TYR105 PRO106 ALA107 ASN108 ALA109 GLY110 PRO111 GLU112 LEU113 ALA114 LYS115 ARG116 ILE117 ASN118 ARG119 THR120 LEU121 GLN122 ARG123 ALA124 ASP125 GLN126 ILE127 GLU128 THR129 ALA130 GLU131 GLY132 LYS133 GLY134 LEU135 SER136 VAL137 ASP138 THR139 TRP140 PHE141 ALA142 PRO143 ILE144 VAL145 ALA146 ASP147 ALA148 GLU149 ALA150 GLY151 PHE152 GLY153 GLY154 PRO155 LEU156 ASP157 ALA158 PHE159 GLU160 ILE161 MET162 LYS163 ALA164 TYR165 ILE166 GLU167 ALA168 GLY169 ALA170 ALA171 GLY172 VAL173 HIS174 PHE175 GLU176 ASP177 GLN178 LEU179 ALA180 SER181 GLU182 LYS183 LYS184 CYS185 GLY186 HIS187 LEU188 GLY189 GLY190 LYS191 VAL192 LEU193 ILE194 PRO195 THR196 ALA197 ALA198 HIS199 ILE200 ARG201 ASN202 LEU203 ASN204 ALA205 ALA206 ARG207 LEU208 ALA209 ALA210 ASP211 VAL212 MET213 GLY214 THR215 PRO216 THR217 LEU218 ILE219 VAL220 ALA221 ARG222 THR223 ASP224 ALA225 GLU226 ALA227 ALA228 LYS229 LEU230 LEU231 THR232 SER233 ASP234 ILE235 ASP236 GLU237 ARG238 ASP239 GLN240 PRO241 PHE242 VAL243 ASP244 TYR245 GLU246 ALA247 GLY248 ARG249 THR250 ALA251 GLU252 GLY253 PHE254 TYR255 GLN256 VAL257 LYS258 ASN259 GLY260 ILE261 GLU262 PRO263 CYS264 ILE265 ALA266 ARG267 ALA268 ILE269 ALA270 TYR271 ALA272 PRO273 TYR274 CYS275 ASP276 LEU277 ILE278 TRP279 MET280 GLU281 THR282 SER283 LYS284 PRO285 ASP286 LEU287 ALA288 GLN289 ALA290 ARG291 ARG292 PHE293 ALA294 GLU295 ALA296 VAL297 HIS298 LYS299 ALA300 HIS301 PRO302 GLY303 LYS304 LEU305 LEU306 ALA307 TYR308 ASN309 CYS310 SER311 PRO312 SER313 PHE314 ASN315 TRP316 LYS317 LYS318 ASN319 LEU320 ASP321 ASP322 ALA323 THR324 ILE325 ALA326 LYS327 PHE328 GLN329 ARG330 GLU331 LEU332 GLY333 ALA334 MET335 GLY336 TYR337 LYS338 PHE339 GLN340 PHE341 ILE342 THR343 LEU344 ALA345 GLY346 PHE347 HIS348 GLN349 LEU350 ASN351 TYR352 GLY353 MET354 PHE355 GLU356 LEU357 ALA358 ARG359 GLY360 TYR361 LYS362 ASP363 ARG364 GLN365 MET366 ALA367 ALA368 TYR369 SER370 GLU371 LEU372 GLN373 GLN374 ALA375 GLU376 PHE377 ALA378 ALA379 GLU380 ALA381 ASP382 GLY383 TYR384 THR385 ALA386 THR387 LYS388 HIS389 GLN390 ARG391 GLU392 VAL393 GLY394 THR395 GLY396 TYR397 PHE398 ASP399 ALA400 VAL401 SER402 LEU403 ALA404 ILE405 THR406 GLY407 GLY408 GLN409 SER410 SER411 THR412 THR413 ALA414 MET415 LYS416 GLU417 SER418 THR419 GLU420 THR421 ALA422 GLN423 PHE424
Unit 3 ASP3 PHE4 TYR5 SER6 LEU7 ILE8 PRO9 SER10 ALA11 PRO12 LYS13 GLY14 ARG15 PHE16 ASP17 GLY18 ILE19 GLU20 ARG21 ALA22 HIS23 THR24 ALA25 GLU26 ASP27 VAL28 LYS29 ARG30 LEU31 ARG32 GLY33 SER34 VAL35 GLU36 ILE37 LYS38 TYR39 SER40 LEU41 ALA42 GLU43 MET44 GLY45 ALA46 ASN47 ARG48 LEU49 TRP50 LYS51 LEU52 ILE53 HIS54 GLU55 GLU56 ASP57 PHE58 VAL59 ASN60 ALA61 LEU62 GLY63 ALA64 LEU65 SER66 GLY67 ASN68 GLN69 ALA70 MET71 GLN72 MET73 VAL74 ARG75 ALA76 GLY77 LEU78 LYS79 ALA80 ILE81 TYR82 LEU83 SER84 GLY85 TRP86 GLN87 VAL88 ALA89 ALA90 ASP91 ALA92 ASN93 THR94 ALA95 SER96 ALA97 MET98 TYR99 PRO100 ASP101 GLN102 SER103 LEU104 TYR105 PRO106 ALA107 ASN108 ALA109 GLY110 PRO111 GLU112 LEU113 ALA114 LYS115 ARG116 ILE117 ASN118 ARG119 THR120 LEU121 GLN122 ARG123 ALA124 ASP125 GLN126 ILE127 GLU128 THR129 ALA130 GLU131 GLY132 LYS133 GLY134 LEU135 SER136 VAL137 ASP138 THR139 TRP140 PHE141 ALA142 PRO143 ILE144 VAL145 ALA146 ASP147 ALA148 GLU149 ALA150 GLY151 PHE152 GLY153 GLY154 PRO155 LEU156 ASP157 ALA158 PHE159 GLU160 ILE161 MET162 LYS163 ALA164 TYR165 ILE166 GLU167 ALA168 GLY169 ALA170 ALA171 GLY172 VAL173 HIS174 PHE175 GLU176 ASP177 GLN178 LEU179 ALA180 SER181 GLU182 LYS183 LYS184 CYS185 GLY186 HIS187 LEU188 GLY189 GLY190 LYS191 VAL192 LEU193 ILE194 PRO195 THR196 ALA197 ALA198 HIS199 ILE200 ARG201 ASN202 LEU203 ASN204 ALA205 ALA206 ARG207 LEU208 ALA209 ALA210 ASP211 VAL212 MET213 GLY214 THR215 PRO216 THR217 LEU218 ILE219 VAL220 ALA221 ARG222 THR223 ASP224 ALA225 GLU226 ALA227 ALA228 LYS229 LEU230 LEU231 THR232 SER233 ASP234 ILE235 ASP236 GLU237 ARG238 ASP239 GLN240 PRO241 PHE242 VAL243 ASP244 TYR245 GLU246 ALA247 GLY248 ARG249 THR250 ALA251 GLU252 GLY253 PHE254 TYR255 GLN256 VAL257 LYS258 ASN259 GLY260 ILE261 GLU262 PRO263 CYS264 ILE265 ALA266 ARG267 ALA268 ILE269 ALA270 TYR271 ALA272 PRO273 TYR274 CYS275 ASP276 LEU277 ILE278 TRP279 MET280 GLU281 THR282 SER283 LYS284 PRO285 ASP286 LEU287 ALA288 GLN289 ALA290 ARG291 ARG292 PHE293 ALA294 GLU295 ALA296 VAL297 HIS298 LYS299 ALA300 HIS301 PRO302 GLY303 LYS304 LEU305 LEU306 ALA307 TYR308 ASN309 CYS310 SER311 PRO312 SER313 PHE314 ASN315 TRP316 LYS317 LYS318 ASN319 LEU320 ASP321 ASP322 ALA323 THR324 ILE325 ALA326 LYS327 PHE328 GLN329 ARG330 GLU331 LEU332 GLY333 ALA334 MET335 GLY336 TYR337 LYS338 PHE339 GLN340 PHE341 ILE342 THR343 LEU344 ALA345 GLY346 PHE347 HIS348 GLN349 LEU350 ASN351 TYR352 GLY353 MET354 PHE355 GLU356 LEU357 ALA358 ARG359 GLY360 TYR361 LYS362 ASP363 ARG364 GLN365 MET366 ALA367 ALA368 TYR369 SER370 GLU371 LEU372 GLN373 GLN374 ALA375 GLU376 PHE377 ALA378 ALA379 GLU380 ALA381 ASP382 GLY383 TYR384 THR385 ALA386 THR387 LYS388 HIS389 GLN390 ARG391 GLU392 VAL393 GLY394 THR395 GLY396 TYR397 PHE398 ASP399 ALA400 VAL401 SER402 LEU403 ALA404 ILE405 THR406 GLY407 GLY408 GLN409 SER410 SER411 THR412 THR413 ALA414 MET415 LYS416 GLU417 SER418 THR419 GLU420 THR421 ALA422 GLN423 PHE424 LYS425
Unit 4 ASP3 PHE4 TYR5 SER6 LEU7 ILE8 PRO9 SER10 ALA11 PRO12 LYS13 GLY14 ARG15 PHE16 ASP17 GLY18 ILE19 GLU20 ARG21 ALA22 HIS23 THR24 ALA25 GLU26 ASP27 VAL28 LYS29 ARG30 LEU31 ARG32 GLY33 SER34 VAL35 GLU36 ILE37 LYS38 TYR39 SER40 LEU41 ALA42 GLU43 MET44 GLY45 ALA46 ASN47 ARG48 LEU49 TRP50 LYS51 LEU52 ILE53 HIS54 GLU55 GLU56 ASP57 PHE58 VAL59 ASN60 ALA61 LEU62 GLY63 ALA64 LEU65 SER66 GLY67 ASN68 GLN69 ALA70 MET71 GLN72 MET73 VAL74 ARG75 ALA76 GLY77 LEU78 LYS79 ALA80 ILE81 TYR82 LEU83 SER84 GLY85 TRP86 GLN87 VAL88 ALA89 ALA90 ASP91 ALA92 ASN93 THR94 ALA95 SER96 ALA97 MET98 TYR99 PRO100 ASP101 GLN102 SER103 LEU104 TYR105 PRO106 ALA107 ASN108 ALA109 GLY110 PRO111 GLU112 LEU113 ALA114 LYS115 ARG116 ILE117 ASN118 ARG119 THR120 LEU121 GLN122 ARG123 ALA124 ASP125 GLN126 ILE127 GLU128 THR129 ALA130 GLU131 GLY132 LYS133 GLY134 LEU135 SER136 VAL137 ASP138 THR139 TRP140 PHE141 ALA142 PRO143 ILE144 VAL145 ALA146 ASP147 ALA148 GLU149 ALA150 GLY151 PHE152 GLY153 GLY154 PRO155 LEU156 ASP157 ALA158 PHE159 GLU160 ILE161 MET162 LYS163 ALA164 TYR165 ILE166 GLU167 ALA168 GLY169 ALA170 ALA171 GLY172 VAL173 HIS174 PHE175 GLU176 ASP177 GLN178 LEU179 ALA180 SER181 GLU182 LYS183 LYS184 CYS185 GLY186 HIS187 LEU188 GLY189 GLY190 LYS191 VAL192 LEU193 ILE194 PRO195 THR196 ALA197 ALA198 HIS199 ILE200 ARG201 ASN202 LEU203 ASN204 ALA205 ALA206 ARG207 LEU208 ALA209 ALA210 ASP211 VAL212 MET213 GLY214 THR215 PRO216 THR217 LEU218 ILE219 VAL220 ALA221 ARG222 THR223 ASP224 ALA225 GLU226 ALA227 ALA228 LYS229 LEU230 LEU231 THR232 SER233 ASP234 ILE235 ASP236 GLU237 ARG238 ASP239 GLN240 PRO241 PHE242 VAL243 ASP244 TYR245 GLU246 ALA247 GLY248 ARG249 THR250 ALA251 GLU252 GLY253 PHE254 TYR255 GLN256 VAL257 LYS258 ASN259 GLY260 ILE261 GLU262 PRO263 CYS264 ILE265 ALA266 ARG267 ALA268 ILE269 ALA270 TYR271 ALA272 PRO273 TYR274 CYS275 ASP276 LEU277 ILE278 TRP279 MET280 GLU281 THR282 SER283 LYS284 PRO285 ASP286 LEU287 ALA288 GLN289 ALA290 ARG291 ARG292 PHE293 ALA294 GLU295 ALA296 VAL297 HIS298 LYS299 ALA300 HIS301 PRO302 GLY303 LYS304 LEU305 LEU306 ALA307 TYR308 ASN309 CYS310 SER311 PRO312 SER313 PHE314 ASN315 TRP316 LYS317 LYS318 ASN319 LEU320 ASP321 ASP322 ALA323 THR324 ILE325 ALA326 LYS327 PHE328 GLN329 ARG330 GLU331 LEU332 GLY333 ALA334 MET335 GLY336 TYR337 LYS338 PHE339 GLN340 PHE341 ILE342 THR343 LEU344 ALA345 GLY346 PHE347 HIS348 GLN349 LEU350 ASN351 TYR352 GLY353 MET354 PHE355 GLU356 LEU357 ALA358 ARG359 GLY360 TYR361 LYS362 ASP363 ARG364 GLN365 MET366 ALA367 ALA368 TYR369 SER370 GLU371 LEU372 GLN373 GLN374 ALA375 GLU376 PHE377 ALA378 ALA379 GLU380 ALA381 ASP382 GLY383 TYR384 THR385 ALA386 THR387 LYS388 HIS389 GLN390 ARG391 GLU392 VAL393 GLY394 THR395 GLY396 TYR397 PHE398 ASP399 ALA400 VAL401 SER402 LEU403 ALA404 ILE405 THR406 GLY407 GLY408 GLN409 SER410 SER411 THR412 THR413 ALA414 MET415 LYS416 GLU417 SER418 THR419 GLU420 THR421 ALA422 GLN423 PHE424 LYS425 PRO426

Ligands
Unit 5 MG430 EDO440 EDO445 ICT450
Unit 6 EDO445 ICT450
Unit 7 EDO445
Unit 8 MG430
Unit 9 EDO440 ICT450
Unit 10 EDO445
Unit 11 MG430
Unit 12 MG430 ICT450

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany