3P05 - Sequence, Chains, Asymmetric and Biological Units

• Title: X-RAY STRUCTURE OF PENTAMERIC HIV-1 CA
• Keywords: CAPSID PROTEIN, VIRAL PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3P05	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HIV-1 CA	A	210	1606	0
2	Protein	HIV-1 CA	B	209	1594	0
3	Protein	HIV-1 CA	C	209	1592	0
4	Protein	HIV-1 CA	D	206	1582	0
5	Protein	HIV-1 CA	E	199	1534	0
6	Ligand	HIV-1 CA	E	1	0	1
7	Ligand	HIV-1 CA	A	3	0	3
8	Ligand	HIV-1 CA	B	1	0	1
9	Ligand	HIV-1 CA	C	1	0	1
10	Ligand	HIV-1 CA	D	2	0	2
11	Ligand	HIV-1 CA	A	1	0	1
12	Ligand	HIV-1 CA	E	1	0	1
total				1043	7908	10

Proteins

Unit 1	PRO 1 ILE 2 HIS 12 GLN 13 ALA 14 ILE 15 SER 16 PRO 17 ARG 18 THR 19 LEU 20 CYS 21 CYS 22 TRP 23 VAL 24 LYS 25 VAL 26 VAL 27 GLU 28 GLU 29 LYS 30 ALA 31 PHE 32 SER 33 PRO 34 GLU 35 VAL 36 ILE 37 PRO 38 MET 39 PHE 40 SER 41 ALA 42 LEU 43 SER 44 GLU 45 GLY 46 ALA 47 THR 48 PRO 49 GLN 50 ASP 51 LEU 52 ASN 53 THR 54 MET 55 LEU 56 ASN 57 THR 58 VAL 59 GLY 60 GLY 61 HIS 62 GLN 63 ALA 64 ALA 65 MET 66 GLN 67 MET 68 LEU 69 LYS 70 GLU 71 THR 72 ILE 73 ASN 74 GLU 75 GLU 76 ALA 77 ALA 78 GLU 79 TRP 80 ASP 81 ARG 82 LEU 83 HIS 84 PRO 85 VAL 86 HIS 87 ALA 88 GLY 89 PRO 90 ILE 91 ALA 92 PRO 93 GLY 94 GLN 95 MET 96 ARG 97 GLU 98 PRO 99 ARG 100 GLY 101 SER 102 ASP 103 ILE 104 ALA 105 GLY 106 THR 107 THR 108 SER 109 THR 110 LEU 111 GLN 112 GLU 113 GLN 114 ILE 115 GLY 116 TRP 117 MET 118 THR 119 HIS 120 ASN 121 PRO 122 PRO 123 ILE 124 PRO 125 VAL 126 GLY 127 GLU 128 ILE 129 TYR 130 LYS 131 ARG 132 TRP 133 ILE 134 ILE 135 LEU 136 GLY 137 LEU 138 ASN 139 LYS 140 ILE 141 VAL 142 ARG 143 MET 144 TYR 145 SER 146 PRO 147 THR 148 SER 149 ILE 150 LEU 151 ASP 152 ILE 153 ARG 154 GLN 155 GLY 156 PRO 157 LYS 158 GLU 159 PRO 160 PHE 161 ARG 162 ASP 163 TYR 164 VAL 165 ASP 166 ARG 167 PHE 168 TYR 169 LYS 170 THR 171 LEU 172 ARG 173 ALA 174 GLU 175 GLN 176 ALA 177 SER 178 GLN 179 GLU 180 VAL 181 LYS 182 ASN 183 ALA 184 ALA 185 THR 186 GLU 187 THR 188 LEU 189 LEU 190 VAL 191 GLN 192 ASN 193 ALA 194 ASN 195 PRO 196 ASP 197 CYS 198 LYS 199 THR 200 ILE 201 LEU 202 LYS 203 ALA 204 LEU 205 GLY 206 PRO 207 GLY 208 ALA 209 THR 210 LEU 211 GLU 212 GLU 213 MET 214 MET 215 THR 216 ALA 217 CYS 218 GLN 219
Unit 2	PRO 1 ILE 2 VAL 3 GLN 4 ASN 5 LEU 6 GLN 7 GLY 8 GLN 9 MET 10 VAL 11 HIS 12 GLN 13 ALA 14 ILE 15 SER 16 PRO 17 ARG 18 THR 19 LEU 20 CYS 21 CYS 22 TRP 23 VAL 24 LYS 25 VAL 26 VAL 27 GLU 28 GLU 29 LYS 30 ALA 31 PHE 32 SER 33 PRO 34 GLU 35 VAL 36 ILE 37 PRO 38 MET 39 PHE 40 SER 41 ALA 42 LEU 43 SER 44 GLU 45 GLY 46 ALA 47 THR 48 PRO 49 GLN 50 ASP 51 LEU 52 ASN 53 THR 54 MET 55 LEU 56 ASN 57 THR 58 VAL 59 GLY 60 GLY 61 HIS 62 GLN 63 ALA 64 ALA 65 MET 66 GLN 67 MET 68 LEU 69 LYS 70 GLU 71 THR 72 ILE 73 ASN 74 GLU 75 GLU 76 ALA 77 ALA 78 GLU 79 TRP 80 ASP 81 ARG 82 LEU 83 HIS 84 PRO 85 MET 96 ARG 97 GLU 98 PRO 99 ARG 100 GLY 101 SER 102 ASP 103 ILE 104 ALA 105 GLY 106 THR 107 THR 108 SER 109 THR 110 LEU 111 GLN 112 GLU 113 GLN 114 ILE 115 GLY 116 TRP 117 MET 118 THR 119 HIS 120 ASN 121 PRO 122 PRO 123 ILE 124 PRO 125 VAL 126 GLY 127 GLU 128 ILE 129 TYR 130 LYS 131 ARG 132 TRP 133 ILE 134 ILE 135 LEU 136 GLY 137 LEU 138 ASN 139 LYS 140 ILE 141 VAL 142 ARG 143 MET 144 TYR 145 SER 146 PRO 147 THR 148 SER 149 ILE 150 LEU 151 ASP 152 ILE 153 ARG 154 GLN 155 GLY 156 PRO 157 LYS 158 GLU 159 PRO 160 PHE 161 ARG 162 ASP 163 TYR 164 VAL 165 ASP 166 ARG 167 PHE 168 TYR 169 LYS 170 THR 171 LEU 172 ARG 173 ALA 174 GLU 175 GLN 176 ALA 177 SER 178 GLN 179 GLU 180 VAL 181 LYS 182 ASN 183 ALA 184 ALA 185 THR 186 GLU 187 THR 188 LEU 189 LEU 190 VAL 191 GLN 192 ASN 193 ALA 194 ASN 195 PRO 196 ASP 197 CYS 198 LYS 199 THR 200 ILE 201 LEU 202 LYS 203 ALA 204 LEU 205 GLY 206 PRO 207 GLY 208 ALA 209 THR 210 LEU 211 GLU 212 GLU 213 MET 214 MET 215 THR 216 ALA 217 CYS 218 GLN 219
Unit 3	PRO 1 ILE 2 VAL 3 GLN 4 ASN 5 LEU 6 GLN 7 GLY 8 GLN 9 MET 10 VAL 11 HIS 12 GLN 13 ALA 14 ILE 15 SER 16 PRO 17 ARG 18 THR 19 LEU 20 CYS 21 CYS 22 TRP 23 VAL 24 LYS 25 VAL 26 VAL 27 GLU 28 GLU 29 LYS 30 ALA 31 PHE 32 SER 33 PRO 34 GLU 35 VAL 36 ILE 37 PRO 38 MET 39 PHE 40 SER 41 ALA 42 LEU 43 SER 44 GLU 45 GLY 46 ALA 47 THR 48 PRO 49 GLN 50 ASP 51 LEU 52 ASN 53 THR 54 MET 55 LEU 56 ASN 57 THR 58 VAL 59 GLY 60 GLY 61 HIS 62 GLN 63 ALA 64 ALA 65 MET 66 GLN 67 MET 68 LEU 69 LYS 70 GLU 71 THR 72 ILE 73 ASN 74 GLU 75 GLU 76 ALA 77 ALA 78 GLU 79 TRP 80 ASP 81 ARG 82 LEU 83 HIS 84 PRO 85 MET 96 ARG 97 GLU 98 PRO 99 ARG 100 GLY 101 SER 102 ASP 103 ILE 104 ALA 105 GLY 106 THR 107 THR 108 SER 109 THR 110 LEU 111 GLN 112 GLU 113 GLN 114 ILE 115 GLY 116 TRP 117 MET 118 THR 119 HIS 120 ASN 121 PRO 122 PRO 123 ILE 124 PRO 125 VAL 126 GLY 127 GLU 128 ILE 129 TYR 130 LYS 131 ARG 132 TRP 133 ILE 134 ILE 135 LEU 136 GLY 137 LEU 138 ASN 139 LYS 140 ILE 141 VAL 142 ARG 143 MET 144 TYR 145 SER 146 PRO 147 THR 148 SER 149 ILE 150 LEU 151 ASP 152 ILE 153 ARG 154 GLN 155 GLY 156 PRO 157 LYS 158 GLU 159 PRO 160 PHE 161 ARG 162 ASP 163 TYR 164 VAL 165 ASP 166 ARG 167 PHE 168 TYR 169 LYS 170 THR 171 LEU 172 ARG 173 ALA 174 GLU 175 GLN 176 ALA 177 SER 178 GLN 179 GLU 180 VAL 181 LYS 182 ASN 183 ALA 184 ALA 185 THR 186 GLU 187 THR 188 LEU 189 LEU 190 VAL 191 GLN 192 ASN 193 ALA 194 ASN 195 PRO 196 ASP 197 CYS 198 LYS 199 THR 200 ILE 201 LEU 202 LYS 203 ALA 204 LEU 205 GLY 206 PRO 207 GLY 208 ALA 209 THR 210 LEU 211 GLU 212 GLU 213 MET 214 MET 215 THR 216 ALA 217 CYS 218 GLN 219
Unit 4	PRO 1 ILE 2 VAL 3 GLN 4 ASN 5 GLN 9 MET 10 VAL 11 HIS 12 GLN 13 ALA 14 ILE 15 SER 16 PRO 17 ARG 18 THR 19 LEU 20 CYS 21 CYS 22 TRP 23 VAL 24 LYS 25 VAL 26 VAL 27 GLU 28 GLU 29 LYS 30 ALA 31 PHE 32 SER 33 PRO 34 GLU 35 VAL 36 ILE 37 PRO 38 MET 39 PHE 40 SER 41 ALA 42 LEU 43 SER 44 GLU 45 GLY 46 ALA 47 THR 48 PRO 49 GLN 50 ASP 51 LEU 52 ASN 53 THR 54 MET 55 LEU 56 ASN 57 THR 58 VAL 59 GLY 60 GLY 61 HIS 62 GLN 63 ALA 64 ALA 65 MET 66 GLN 67 MET 68 LEU 69 LYS 70 GLU 71 THR 72 ILE 73 ASN 74 GLU 75 GLU 76 ALA 77 ALA 78 GLU 79 TRP 80 ASP 81 ARG 82 LEU 83 HIS 84 PRO 85 MET 96 ARG 97 GLU 98 PRO 99 ARG 100 GLY 101 SER 102 ASP 103 ILE 104 ALA 105 GLY 106 THR 107 THR 108 SER 109 THR 110 LEU 111 GLN 112 GLU 113 GLN 114 ILE 115 GLY 116 TRP 117 MET 118 THR 119 HIS 120 ASN 121 PRO 122 PRO 123 ILE 124 PRO 125 VAL 126 GLY 127 GLU 128 ILE 129 TYR 130 LYS 131 ARG 132 TRP 133 ILE 134 ILE 135 LEU 136 GLY 137 LEU 138 ASN 139 LYS 140 ILE 141 VAL 142 ARG 143 MET 144 TYR 145 SER 146 PRO 147 THR 148 SER 149 ILE 150 LEU 151 ASP 152 ILE 153 ARG 154 GLN 155 GLY 156 PRO 157 LYS 158 GLU 159 PRO 160 PHE 161 ARG 162 ASP 163 TYR 164 VAL 165 ASP 166 ARG 167 PHE 168 TYR 169 LYS 170 THR 171 LEU 172 ARG 173 ALA 174 GLU 175 GLN 176 ALA 177 SER 178 GLN 179 GLU 180 VAL 181 LYS 182 ASN 183 ALA 184 ALA 185 THR 186 GLU 187 THR 188 LEU 189 LEU 190 VAL 191 GLN 192 ASN 193 ALA 194 ASN 195 PRO 196 ASP 197 CYS 198 LYS 199 THR 200 ILE 201 LEU 202 LYS 203 ALA 204 LEU 205 GLY 206 PRO 207 GLY 208 ALA 209 THR 210 LEU 211 GLU 212 GLU 213 MET 214 MET 215 THR 216 ALA 217 CYS 218 GLN 219
Unit 5	PRO 1 ILE 2 HIS 12 GLN 13 ALA 14 ILE 15 SER 16 PRO 17 ARG 18 THR 19 LEU 20 CYS 21 CYS 22 TRP 23 VAL 24 LYS 25 VAL 26 VAL 27 GLU 28 GLU 29 LYS 30 ALA 31 PHE 32 SER 33 PRO 34 GLU 35 VAL 36 ILE 37 PRO 38 MET 39 PHE 40 SER 41 ALA 42 LEU 43 SER 44 GLU 45 GLY 46 ALA 47 THR 48 PRO 49 GLN 50 ASP 51 LEU 52 ASN 53 THR 54 MET 55 LEU 56 ASN 57 THR 58 VAL 59 GLY 60 GLY 61 HIS 62 GLN 63 ALA 64 ALA 65 MET 66 GLN 67 MET 68 LEU 69 LYS 70 GLU 71 THR 72 ILE 73 ASN 74 GLU 75 GLU 76 ALA 77 ALA 78 GLU 79 TRP 80 ASP 81 ARG 82 LEU 83 HIS 84 PRO 85 ARG 97 GLU 98 PRO 99 ARG 100 GLY 101 SER 102 ASP 103 ILE 104 ALA 105 GLY 106 THR 107 THR 108 SER 109 THR 110 LEU 111 GLN 112 GLU 113 GLN 114 ILE 115 GLY 116 TRP 117 MET 118 THR 119 HIS 120 ASN 121 PRO 122 PRO 123 ILE 124 PRO 125 VAL 126 GLY 127 GLU 128 ILE 129 TYR 130 LYS 131 ARG 132 TRP 133 ILE 134 ILE 135 LEU 136 GLY 137 LEU 138 ASN 139 LYS 140 ILE 141 VAL 142 ARG 143 MET 144 TYR 145 SER 146 PRO 147 THR 148 SER 149 ILE 150 LEU 151 ASP 152 ILE 153 ARG 154 GLN 155 GLY 156 PRO 157 LYS 158 GLU 159 PRO 160 PHE 161 ARG 162 ASP 163 TYR 164 VAL 165 ASP 166 ARG 167 PHE 168 TYR 169 LYS 170 THR 171 LEU 172 ARG 173 ALA 174 GLU 175 GLN 176 ALA 177 SER 178 GLN 179 GLU 180 VAL 181 LYS 182 ASN 183 ALA 184 ALA 185 THR 186 GLU 187 THR 188 LEU 189 LEU 190 VAL 191 GLN 192 ASN 193 ALA 194 ASN 195 PRO 196 ASP 197 CYS 198 LYS 199 THR 200 ILE 201 LEU 202 LYS 203 ALA 204 LEU 205 GLY 206 PRO 207 GLY 208 ALA 209 THR 210 LEU 211 GLU 212 GLU 213 MET 214 MET 215 THR 216 ALA 217 CYS 218 GLN 219

Ligands

Unit 6	IOD 232
Unit 7	IOD 232 IOD 233 IOD 234
Unit 8	IOD 232
Unit 9	IOD 232
Unit 10	IOD 232 IOD 233
Unit 11	IOD 235
Unit 12	IOD 233