3OJY - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN COMPLEMENT COMPONENT C8
• Keywords: MACPF, LIPOCALIN, COMPLEMENT, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3OJY	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	COMPLEMENT COMPONENT C8 ALPHA CHAIN	A	478	3799	0
2	Protein	COMPLEMENT COMPONENT C8 BETA CHAIN	B	504	4039	11
3	Protein	COMPLEMENT COMPONENT C8 GAMMA CHAIN	C	165	1295	0
4	Ligand	COMPLEMENT COMPONENT C8 ALPHA CHAIN	A	5	0	45
5	Ligand	COMPLEMENT COMPONENT C8 BETA CHAIN	B	5	0	45
total				1157	9133	101

Proteins

Unit 1	ALA 2 THR 3 PRO 4 ALA 5 ALA 6 VAL 7 THR 8 CYS 9 GLN 10 LEU 11 SER 12 ASN 13 TRP 14 SER 15 GLU 16 TRP 17 THR 18 ASP 19 CYS 20 PHE 21 PRO 22 CYS 23 GLN 24 ASP 25 LYS 26 LYS 27 TYR 28 ARG 29 HIS 30 ARG 31 SER 32 LEU 33 LEU 34 GLN 35 PRO 36 ASN 37 LYS 38 PHE 39 GLY 40 GLY 41 THR 42 ILE 43 CYS 44 SER 45 GLY 46 ASP 47 ILE 48 TRP 49 ASP 50 GLN 51 ALA 52 SER 53 CYS 54 SER 55 SER 56 SER 57 THR 58 THR 59 CYS 60 GLN 63 ALA 64 GLN 65 CYS 66 GLY 67 GLN 68 ASP 69 PHE 70 GLN 71 CYS 72 LYS 73 GLU 74 THR 75 GLY 76 ARG 77 CYS 78 LEU 79 LYS 80 ARG 81 HIS 82 LEU 83 VAL 84 CYS 85 ASN 86 GLY 87 ASP 88 GLN 89 ASP 90 CYS 91 LEU 92 ASP 93 GLY 94 SER 95 ASP 96 GLU 97 ASP 98 ASP 99 CYS 100 GLU 101 ASP 102 VAL 103 ARG 104 ALA 105 ILE 106 ASP 107 GLU 108 ASP 109 CYS 110 SER 111 GLN 112 TYR 113 GLU 114 PRO 115 ILE 116 PRO 117 GLY 118 SER 119 GLN 120 LYS 121 ALA 122 ALA 123 LEU 124 GLY 125 TYR 126 ASN 127 ILE 128 LEU 129 THR 130 GLN 131 GLU 132 ASP 133 ALA 134 GLN 135 SER 136 VAL 137 TYR 138 ASP 139 ALA 140 SER 141 TYR 142 TYR 143 GLY 144 GLY 145 GLN 146 CYS 147 GLU 148 THR 149 VAL 150 TYR 151 ASN 152 GLY 153 GLU 154 TRP 155 ARG 156 GLU 157 LEU 158 ARG 159 TYR 160 ASP 161 SER 162 THR 163 CYS 164 GLU 165 ARG 166 LEU 167 TYR 168 TYR 169 GLY 170 ASP 171 ASP 172 GLU 173 LYS 174 TYR 175 PHE 176 ARG 177 LYS 178 PRO 179 TYR 180 ASN 181 PHE 182 LEU 183 LYS 184 TYR 185 HIS 186 PHE 187 GLU 188 ALA 189 LEU 190 ALA 191 ASP 192 THR 193 GLY 194 ILE 195 SER 196 SER 197 GLU 198 PHE 199 TYR 200 ASP 201 ASN 202 ALA 203 ASN 204 ASP 205 LEU 206 LEU 207 SER 208 LYS 209 VAL 210 LYS 211 SER 244 PHE 245 LEU 246 ASN 247 GLU 248 LEU 249 ASN 250 LYS 251 TYR 252 ASN 253 GLU 254 LYS 255 LYS 256 PHE 257 ILE 258 PHE 259 THR 260 ARG 261 ILE 262 PHE 263 THR 264 LYS 265 VAL 266 GLN 267 THR 268 ALA 269 HIS 270 PHE 271 LYS 272 MET 273 ARG 274 LYS 275 ASP 276 ASP 277 ILE 278 MET 279 LEU 280 ASP 281 GLU 282 GLY 283 MET 284 LEU 285 GLN 286 SER 287 LEU 288 MET 289 GLU 290 LEU 291 PRO 292 ASP 293 GLN 294 TYR 295 ASN 296 TYR 297 GLY 298 MET 299 TYR 300 ALA 301 LYS 302 PHE 303 ILE 304 ASN 305 ASP 306 TYR 307 GLY 308 THR 309 HIS 310 TYR 311 ILE 312 THR 313 SER 314 GLY 315 SER 316 MET 317 GLY 318 GLY 319 ILE 320 TYR 321 GLU 322 TYR 323 ILE 324 LEU 325 VAL 326 ILE 327 ASP 328 LYS 329 ALA 330 LYS 331 MET 332 GLU 333 SER 334 LEU 335 GLY 336 ILE 337 THR 338 SER 339 ARG 340 ASP 341 ILE 342 THR 343 THR 344 CYS 345 PHE 346 GLY 347 GLY 348 SER 349 LEU 350 GLY 351 ILE 352 GLN 353 TYR 354 HIS 368 CYS 369 LYS 370 LYS 371 PHE 372 GLY 373 GLY 374 GLY 375 LYS 376 THR 377 GLU 378 ARG 379 ALA 380 ARG 381 LYS 382 ALA 383 MET 384 ALA 385 VAL 386 GLU 387 ASP 388 ILE 389 ILE 390 SER 391 ARG 392 VAL 393 ARG 394 GLY 395 GLY 396 SER 397 ARG 408 SER 409 THR 410 ILE 411 THR 412 TYR 413 ARG 414 SER 415 TRP 416 GLY 417 ARG 418 SER 419 LEU 420 LYS 421 TYR 422 ASN 423 PRO 424 VAL 425 VAL 426 ILE 427 ASP 428 PHE 429 GLU 430 MET 431 GLN 432 PRO 433 ILE 434 HIS 435 GLU 436 VAL 437 LEU 438 ARG 439 HIS 440 THR 441 SER 442 LEU 443 GLY 444 PRO 445 LEU 446 GLU 447 ALA 448 LYS 449 ARG 450 GLN 451 ASN 452 LEU 453 ARG 454 ARG 455 ALA 456 LEU 457 ASP 458 GLN 459 TYR 460 LEU 461 MET 462 GLU 463 PHE 464 ASN 465 ALA 466 CYS 467 ARG 468 CYS 469 GLY 470 PRO 471 CYS 472 PHE 473 ASN 474 ASN 475 GLY 476 VAL 477 PRO 478 ILE 479 LEU 480 GLU 481 GLY 482 THR 483 SER 484 CYS 485 ARG 486 CYS 487 GLN 488 CYS 489 ARG 490 LEU 491 GLY 492 SER 493 LEU 494 GLY 495 ALA 496 ALA 497 CYS 498 GLU 499 ALA 506 LYS 507 ALA 508 ASP 509 GLY 510 SER 511 TRP 512 SER 513 CYS 514 TRP 515 SER 516 SER 517 TRP 518 SER 519 VAL 520 CYS 521 ARG 522 ALA 523 GLY 524 ILE 525 GLN 526 GLU 527 ARG 528 ARG 529 ARG 530 GLU 531 CYS 532 SER 543 CYS 544 PRO 545 GLY 546 ARG 547 LYS 548 VAL 549 GLN 550 THR 551 GLN 552
Unit 2	MET 7 PRO 8 ILE 9 ASP 10 CYS 11 GLU 12 LEU 13 SER 14 SER 15 TRP 16 SER 17 SER 18 TRP 19 THR 20 THR 21 CYS 22 ASP 23 PRO 24 CYS 25 GLN 26 LYS 27 LYS 28 ARG 29 TYR 30 ARG 31 TYR 32 ALA 33 TYR 34 LEU 35 LEU 36 GLN 37 PRO 38 SER 39 GLN 40 PHE 41 HIS 42 GLY 43 GLU 44 PRO 45 CYS 46 ASN 47 PHE 48 SER 49 ASP 50 LYS 51 GLU 52 VAL 53 GLU 54 ASP 55 CYS 56 VAL 57 THR 58 ASN 59 ARG 60 PRO 61 CYS 62 ARG 63 SER 64 GLN 65 VAL 66 ARG 67 CYS 68 GLU 69 GLY 70 PHE 71 VAL 72 CYS 73 ALA 74 GLN 75 THR 76 GLY 77 ARG 78 CYS 79 VAL 80 ASN 81 ARG 82 ARG 83 LEU 84 LEU 85 CYS 86 ASN 87 GLY 88 ASP 89 ASN 90 ASP 91 CYS 92 GLY 93 ASP 94 GLN 95 SER 96 ASP 97 GLU 98 ALA 99 ASN 100 CYS 101 ARG 102 ARG 103 ILE 104 TYR 105 LYS 106 LYS 107 CYS 108 GLN 109 HIS 110 GLU 111 MET 112 ASP 113 GLN 114 TYR 115 TRP 116 GLY 117 ILE 118 GLY 119 SER 120 LEU 121 ALA 122 SER 123 GLY 124 ILE 125 ASN 126 LEU 127 PHE 128 THR 129 ASN 130 SER 131 PHE 132 GLU 133 GLY 134 PRO 135 VAL 136 LEU 137 ASP 138 HIS 139 ARG 140 TYR 141 TYR 142 ALA 143 GLY 144 GLY 145 CYS 146 SER 147 PRO 148 HIS 149 TYR 150 ILE 151 LEU 152 ASN 153 THR 154 ARG 155 PHE 156 ARG 157 LYS 158 PRO 159 TYR 160 ASN 161 VAL 162 GLU 163 SER 164 TYR 165 THR 166 PRO 167 GLN 168 THR 169 GLN 170 GLY 171 LYS 172 TYR 173 GLU 174 PHE 175 ILE 176 LEU 177 LYS 178 GLU 179 TYR 180 GLU 181 SER 182 TYR 183 SER 184 ASP 185 PHE 186 GLU 187 ARG 188 ASN 189 VAL 190 THR 191 GLU 192 SER 198 GLY 199 PHE 200 SER 201 PHE 202 GLY 203 PHE 204 LYS 205 ILE 206 PRO 207 GLY 208 ILE 209 PHE 210 GLU 211 LEU 212 GLY 213 ILE 214 SER 215 SER 216 GLN 217 SER 218 ASP 219 ARG 220 GLY 221 LYS 222 HIS 223 TYR 224 ILE 225 ARG 226 ARG 227 THR 228 LYS 229 ARG 230 PHE 231 SER 232 HIS 233 THR 234 LYS 235 SER 236 VAL 237 PHE 238 LEU 239 HIS 240 ALA 241 ARG 242 SER 243 ASP 244 LEU 245 GLU 246 VAL 247 ALA 248 HIS 249 TYR 250 LYS 251 LEU 252 LYS 253 PRO 254 ARG 255 SER 256 LEU 257 MET 258 LEU 259 HIS 260 TYR 261 GLU 262 PHE 263 LEU 264 GLN 265 ARG 266 VAL 267 LYS 268 ARG 269 LEU 270 PRO 271 LEU 272 GLU 273 TYR 274 SER 275 TYR 276 GLY 277 GLU 278 TYR 279 ARG 280 ASP 281 LEU 282 PHE 283 ARG 284 ASP 285 PHE 286 GLY 287 THR 288 HIS 289 TYR 290 ILE 291 THR 292 GLU 293 ALA 294 VAL 295 LEU 296 GLY 297 GLY 298 ILE 299 TYR 300 GLU 301 TYR 302 THR 303 LEU 304 VAL 305 MET 306 ASN 307 LYS 308 GLU 309 ALA 310 MET 311 GLU 312 ARG 313 GLY 314 ASP 315 TYR 316 THR 317 LEU 318 ASN 319 ASN 320 VAL 321 HIS 322 ALA 323 CYS 324 ALA 325 LYS 326 ASN 327 ASP 328 SER 345 VAL 346 GLY 347 LYS 348 CYS 349 ARG 350 GLY 351 ILE 352 LEU 353 ASN 354 GLU 355 ILE 356 LYS 357 ASP 358 ARG 359 ASN 360 LYS 361 ARG 362 ASP 363 TPO 364 MET 365 VAL 366 GLU 367 ASP 368 LEU 369 VAL 370 VAL 371 LEU 372 VAL 373 ARG 374 GLY 375 GLY 376 ALA 377 SER 378 GLU 379 HIS 380 ILE 381 THR 382 THR 383 LEU 384 ALA 385 TYR 386 GLN 387 GLU 388 LEU 389 PRO 390 THR 391 ALA 392 ASP 393 LEU 394 MET 395 GLN 396 GLU 397 TRP 398 GLY 399 ASP 400 ALA 401 VAL 402 GLN 403 TYR 404 ASN 405 PRO 406 ALA 407 ILE 408 ILE 409 LYS 410 VAL 411 LYS 412 VAL 413 GLU 414 PRO 415 LEU 416 TYR 417 GLU 418 LEU 419 VAL 420 THR 421 ALA 422 THR 423 ASP 424 PHE 425 ALA 426 TYR 427 SER 428 SER 429 THR 430 VAL 431 ARG 432 GLN 433 ASN 434 MET 435 LYS 436 GLN 437 ALA 438 LEU 439 GLU 440 GLU 441 PHE 442 GLN 443 LYS 444 GLU 445 VAL 446 SER 447 SER 448 CYS 449 HIS 450 CYS 451 ALA 452 PRO 453 CYS 454 GLN 455 GLY 456 ASN 457 GLY 458 VAL 459 PRO 460 VAL 461 LEU 462 LYS 463 GLY 464 SER 465 ARG 466 CYS 467 ASP 468 CYS 469 ILE 470 CYS 471 PRO 472 VAL 473 GLY 474 SER 475 GLN 476 GLY 477 LEU 478 ALA 479 CYS 480 GLU 481 VAL 482 SER 483 TYR 484 ARG 485 LYS 486 ASN 487 THR 488 PRO 489 ILE 490 ASP 491 GLY 492 LYS 493 TRP 494 ASN 495 CYS 496 TRP 497 SER 498 ASN 499 TRP 500 SER 501 SER 502 CYS 503 SER 504 GLY 505 ARG 506 ARG 507 LYS 508 THR 509 ARG 510 GLN 511 ARG 512 GLN 513 CYS 514 ASN 515 ASN 516 PRO 517 PRO 518 PRO 519 GLN 520 ASN 521 SER 527 GLY 528 PRO 529 ALA 530 SER 531 GLU 532 THR 533 LEU 534 ASP 535 CYS 536
Unit 3	ILE 13 SER 14 THR 15 ILE 16 GLN 17 PRO 18 LYS 19 ALA 20 ASN 21 PHE 22 ASP 23 ALA 24 GLN 25 GLN 26 PHE 27 ALA 28 GLY 29 THR 30 TRP 31 LEU 32 LEU 33 VAL 34 ALA 35 VAL 36 GLY 37 SER 38 ALA 39 CYS 40 ARG 41 PHE 42 LEU 43 GLN 44 GLU 45 GLN 46 GLY 47 HIS 48 ARG 49 ALA 50 GLU 51 ALA 52 THR 53 THR 54 LEU 55 HIS 56 VAL 57 ALA 58 PRO 59 GLN 60 GLY 61 THR 62 ALA 63 MET 64 ALA 65 VAL 66 SER 67 THR 68 PHE 69 ARG 70 LYS 71 LEU 72 ASP 73 GLY 74 ILE 75 CYS 76 TRP 77 GLN 78 VAL 79 ARG 80 GLN 81 LEU 82 TYR 83 GLY 84 ASP 85 THR 86 GLY 87 VAL 88 LEU 89 GLY 90 ARG 91 PHE 92 LEU 93 LEU 94 GLN 95 ALA 99 ARG 100 GLY 101 ALA 102 VAL 103 HIS 104 VAL 105 VAL 106 VAL 107 ALA 108 GLU 109 THR 110 ASP 111 TYR 112 GLN 113 SER 114 PHE 115 ALA 116 VAL 117 LEU 118 TYR 119 LEU 120 GLU 121 ARG 122 ALA 123 GLY 124 GLN 125 LEU 126 SER 127 VAL 128 LYS 129 LEU 130 TYR 131 ALA 132 ARG 133 SER 134 LEU 135 PRO 136 VAL 137 SER 138 ASP 139 SER 140 VAL 141 LEU 142 SER 143 GLY 144 PHE 145 GLU 146 GLN 147 ARG 148 VAL 149 GLN 150 GLU 151 ALA 152 HIS 153 LEU 154 THR 155 GLU 156 ASP 157 GLN 158 ILE 159 PHE 160 TYR 161 PHE 162 PRO 163 LYS 164 TYR 165 GLY 166 PHE 167 CYS 168 GLU 169 ALA 170 ALA 171 ASP 172 GLN 173 PHE 174 HIS 175 VAL 176 LEU 177 ASP 178 GLU 179 VAL 180

Ligands

Unit 4	CA 555 BMA 556 BMA 557 BMA 558 BMA 559
Unit 5	CA 538 BMA 539 BMA 540 BMA 541 BMA 542