Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE A20 ZNF4 AND UBIQUITIN COMPLEX
Keywords UBIQUITIN, ZINC FINGER, ZINC ION, PROTEIN BINDING-HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3OJ3     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   UBIQUITIN  A 73 582 0
2  Protein   UBIQUITIN  B 72 574 0
3  Protein   UBIQUITIN  C 73 582 0
4  Protein   UBIQUITIN  D 73 582 0
5  Protein   UBIQUITIN  E 73 582 0
6  Protein   UBIQUITIN  F 73 582 0
7  Protein   UBIQUITIN  G 71 563 0
8  Protein   UBIQUITIN  H 71 563 0
9  Protein   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  I 33 260 0
10  Protein   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  J 30 240 0
11  Protein   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  K 31 249 0
12  Protein   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  L 31 249 0
13  Protein   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  M 31 249 0
14  Protein   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  N 30 240 0
15  Protein   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  O 32 256 0
16  Protein   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  P 31 249 0
17  Ligand   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  I 1 0 1
18  Ligand   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  J 1 0 1
19  Ligand   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  K 1 0 1
20  Ligand   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  L 1 0 1
21  Ligand   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  M 1 0 1
22  Ligand   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  N 1 0 1
23  Ligand   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  O 1 0 1
24  Ligand   TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3  P 1 0 1
25 Water     119 0 119
total       955 6602 127
Proteins
Unit 1 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73
Unit 2 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72
Unit 3 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73
Unit 4 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73
Unit 5 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73
Unit 6 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73
Unit 7 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71
Unit 8 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71
Unit 9 GLY603 THR604 SER605 LYS606 CYS607 ARG608 LYS609 ALA610 GLY611 CYS612 VAL613 TYR614 PHE615 GLY616 THR617 PRO618 GLU619 ASN620 LYS621 GLY622 PHE623 CYS624 THR625 LEU626 CYS627 PHE628 ILE629 GLU630 TYR631 ARG632 GLU633 ASN634 LYS635
Unit 10 SER605 LYS606 CYS607 ARG608 LYS609 ALA610 GLY611 CYS612 VAL613 TYR614 PHE615 GLY616 THR617 PRO618 GLU619 ASN620 LYS621 GLY622 PHE623 CYS624 THR625 LEU626 CYS627 PHE628 ILE629 GLU630 TYR631 ARG632 GLU633 ASN634
Unit 11 SER605 LYS606 CYS607 ARG608 LYS609 ALA610 GLY611 CYS612 VAL613 TYR614 PHE615 GLY616 THR617 PRO618 GLU619 ASN620 LYS621 GLY622 PHE623 CYS624 THR625 LEU626 CYS627 PHE628 ILE629 GLU630 TYR631 ARG632 GLU633 ASN634 LYS635
Unit 12 SER605 LYS606 CYS607 ARG608 LYS609 ALA610 GLY611 CYS612 VAL613 TYR614 PHE615 GLY616 THR617 PRO618 GLU619 ASN620 LYS621 GLY622 PHE623 CYS624 THR625 LEU626 CYS627 PHE628 ILE629 GLU630 TYR631 ARG632 GLU633 ASN634 LYS635
Unit 13 SER605 LYS606 CYS607 ARG608 LYS609 ALA610 GLY611 CYS612 VAL613 TYR614 PHE615 GLY616 THR617 PRO618 GLU619 ASN620 LYS621 GLY622 PHE623 CYS624 THR625 LEU626 CYS627 PHE628 ILE629 GLU630 TYR631 ARG632 GLU633 ASN634 LYS635
Unit 14 SER605 LYS606 CYS607 ARG608 LYS609 ALA610 GLY611 CYS612 VAL613 TYR614 PHE615 GLY616 THR617 PRO618 GLU619 ASN620 LYS621 GLY622 PHE623 CYS624 THR625 LEU626 CYS627 PHE628 ILE629 GLU630 TYR631 ARG632 GLU633 ASN634
Unit 15 THR604 SER605 LYS606 CYS607 ARG608 LYS609 ALA610 GLY611 CYS612 VAL613 TYR614 PHE615 GLY616 THR617 PRO618 GLU619 ASN620 LYS621 GLY622 PHE623 CYS624 THR625 LEU626 CYS627 PHE628 ILE629 GLU630 TYR631 ARG632 GLU633 ASN634 LYS635
Unit 16 SER605 LYS606 CYS607 ARG608 LYS609 ALA610 GLY611 CYS612 VAL613 TYR614 PHE615 GLY616 THR617 PRO618 GLU619 ASN620 LYS621 GLY622 PHE623 CYS624 THR625 LEU626 CYS627 PHE628 ILE629 GLU630 TYR631 ARG632 GLU633 ASN634 LYS635
Ligands
Unit 17 ZN901
Unit 18 ZN902
Unit 19 ZN903
Unit 20 ZN904
Unit 21 ZN905
Unit 22 ZN906
Unit 23 ZN907
Unit 24 ZN908
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany