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Sequence, Chains, Asymmetric and Biological Units

Title COMPLEX STRUCTURE OF BETA-GALACTOSIDASE FROM TRICHODERMA REE IPTG
Keywords TIM BARREL DOMAIN, GLYCOSIDE HYDROLASE, FAMILY 35, GLYCOPROT HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3OGS     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BETA-GALACTOSIDASE  A 986 7622 0
2  Ligand    B 7 0 83
3  Ligand    C 9 0 105
4  Ligand    D 2 0 28
5  Ligand   BETA-GALACTOSIDASE  A 3 0 43
6 Water     926 0 926
total       1933 7622 1185
Proteins
Unit 1 ALA38 LYS39 GLY40 PRO41 LEU42 GLN43 ASN44 ILE45 VAL46 THR47 TRP48 ASP49 GLU50 HIS51 SER52 LEU53 PHE54 VAL55 HIS56 GLY57 GLU58 ARG59 VAL60 VAL61 ILE62 PHE63 SER64 GLY65 GLU66 VAL67 HIS68 PRO69 PHE70 ARG71 LEU72 PRO73 VAL74 PRO75 SER76 LEU77 TYR78 LEU79 ASP80 VAL81 PHE82 HIS83 LYS84 ILE85 LYS86 ALA87 LEU88 GLY89 PHE90 ASN91 THR92 VAL93 SER94 PHE95 TYR96 VAL97 ASP98 TRP99 ALA100 LEU101 LEU102 GLU103 GLY104 LYS105 PRO106 GLY107 ARG108 PHE109 ARG110 ALA111 ASP112 GLY113 ILE114 PHE115 SER116 LEU117 GLU118 PRO119 PHE120 PHE121 GLU122 ALA123 ALA124 THR125 LYS126 ALA127 GLY128 ILE129 TYR130 LEU131 LEU132 ALA133 ARG134 PRO135 GLY136 PRO137 TYR138 ILE139 ASN140 ALA141 GLU142 VAL143 SER144 GLY145 GLY146 GLY147 PHE148 PRO149 GLY150 TRP151 LEU152 GLN153 ARG154 VAL155 LYS156 GLY157 LYS158 LEU159 ARG160 THR161 ASP162 ALA163 PRO164 ASP165 TYR166 LEU167 HIS168 ALA169 THR170 ASP171 ASN172 TYR173 VAL174 ALA175 HIS176 ILE177 ALA178 SER179 ILE180 ILE181 ALA182 LYS183 ALA184 GLN185 ILE186 THR187 ASN188 GLY189 GLY190 PRO191 VAL192 ILE193 LEU194 TYR195 GLN196 PRO197 GLU198 ASN199 GLU200 TYR201 SER202 GLY203 ALA204 ALA205 GLU206 GLY207 VAL208 LEU209 PHE210 PRO211 ASN212 LYS213 PRO214 TYR215 MET216 GLN217 TYR218 VAL219 ILE220 ASP221 GLN222 ALA223 ARG224 ASN225 ALA226 GLY227 ILE228 ILE229 VAL230 PRO231 LEU232 ILE233 ASN234 ASN235 ASP236 ALA237 PHE238 PRO239 GLY240 GLY241 THR242 GLY243 ALA244 PRO245 GLY246 THR247 GLY248 LEU249 GLY250 SER251 VAL252 ASP253 ILE254 TYR255 GLY256 HIS257 ASP258 GLY259 TYR260 PRO261 LEU262 GLY263 PHE264 ASP265 CYS266 ALA267 HIS268 PRO269 SER270 ALA271 TRP272 PRO273 ASP274 ASN275 GLY276 LEU277 PRO278 THR279 THR280 TRP281 ARG282 GLN283 ASP284 HIS285 LEU286 ASN287 ILE288 SER289 PRO290 SER291 THR292 PRO293 PHE294 SER295 LEU296 VAL297 GLU298 PHE299 GLN300 GLY301 GLY302 ALA303 PHE304 ASP305 PRO306 PHE307 GLY308 GLY309 TRP310 GLY311 PHE312 GLU313 GLN314 CYS315 SER316 ALA317 LEU318 VAL319 ASN320 HIS321 GLU322 PHE323 GLU324 ARG325 VAL326 PHE327 TYR328 LYS329 ASN330 ASN331 MET332 ALA333 ALA334 GLY335 VAL336 THR337 ILE338 PHE339 ASN340 ILE341 TYR342 MET343 THR344 PHE345 GLY346 GLY347 THR348 ASN349 TRP350 GLY351 ASN352 LEU353 GLY354 HIS355 PRO356 GLY357 GLY358 TYR359 THR360 SER361 TYR362 ASP363 TYR364 GLY365 ALA366 SER367 ILE368 ARG369 GLU370 ASP371 ARG372 ARG373 ILE374 ASP375 ARG376 GLU377 LYS378 TYR379 SER380 GLU381 LEU382 LYS383 LEU384 GLN385 GLY386 GLN387 PHE388 LEU389 LYS390 VAL391 SER392 PRO393 GLY394 TYR395 ILE396 THR397 ALA398 THR399 PRO400 GLU401 ASN402 ALA403 THR404 GLN405 GLY406 VAL407 TYR408 SER409 ASP410 SER411 GLN412 ASN413 ILE414 VAL415 ILE416 THR417 PRO418 LEU419 LEU420 ALA421 LYS422 GLU423 SER424 GLY425 ASP426 PHE427 PHE428 VAL429 VAL430 ARG431 HIS432 ALA433 ASN434 TYR435 SER436 SER437 THR438 ASP439 THR440 ALA441 SER442 TYR443 THR444 VAL445 LYS446 LEU447 PRO448 THR449 SER450 ALA451 GLY452 ASP453 LEU454 THR455 ILE456 PRO457 GLN458 LEU459 GLY460 GLY461 SER462 LEU463 THR464 LEU465 THR466 GLY467 ARG468 ASP469 SER470 LYS471 ILE472 HIS473 VAL474 THR475 ASP476 TYR477 PRO478 VAL479 GLY480 LYS481 PHE482 THR483 LEU484 LEU485 TYR486 SER487 THR488 ALA489 GLU490 ILE491 PHE492 THR493 TRP494 ASN495 GLU496 PHE497 ALA498 GLU499 LYS500 THR501 VAL502 LEU503 VAL504 LEU505 TYR506 GLY507 GLY508 ALA509 GLN510 GLU511 LEU512 HIS513 GLU514 PHE515 ALA516 VAL517 LYS518 ASN519 PRO520 PHE521 GLY522 SER523 SER524 LYS525 THR526 ALA527 LYS528 ALA529 LYS530 LYS531 ILE532 GLU533 GLY534 SER535 ASN536 VAL537 THR538 ILE539 HIS540 THR541 THR542 SER543 ASN544 LEU545 THR546 VAL547 VAL548 LEU549 GLN550 TRP551 THR552 ALA553 SER554 SER555 ALA556 ARG557 GLN558 VAL559 VAL560 GLN561 LEU562 GLY563 SER564 LEU565 VAL566 ILE567 TYR568 MET569 VAL570 ASP571 ARG572 ASN573 SER574 ALA575 TYR576 ASN577 TYR578 TRP579 VAL580 PRO581 THR582 LEU583 PRO584 GLY585 SER586 GLY587 LYS588 GLN589 SER590 ALA591 TYR592 GLY593 SER594 SER595 LEU596 MET597 ASN598 PRO599 ASP600 SER601 VAL602 ILE603 ILE604 ASN605 GLY606 GLY607 TYR608 LEU609 ILE610 ARG611 SER612 VAL613 ALA614 ILE615 LYS616 GLY617 ASN618 ALA619 LEU620 SER621 VAL622 GLN623 ALA624 ASP625 PHE626 ASN627 VAL628 THR629 THR630 PRO631 LEU632 GLU633 ILE634 ILE635 GLY636 ILE637 PRO638 LYS639 GLY640 ILE641 SER642 LYS643 LEU644 ALA645 VAL646 ASN647 GLY648 LYS649 GLU650 LEU651 GLY652 TYR653 SER654 VAL655 SER656 GLU657 LEU658 GLY659 ASP660 TRP661 ILE662 ALA663 HIS664 PRO665 ALA666 ILE667 GLU668 ILE669 PRO670 HIS671 VAL672 GLN673 VAL674 PRO675 GLU676 LEU677 THR678 LYS679 LEU680 LYS681 TRP682 TYR683 LYS684 VAL685 ASP686 SER687 LEU688 PRO689 GLU690 ILE691 ARG692 SER693 ASN694 TYR695 ASP696 ASP697 SER698 ARG699 TRP700 PRO701 LEU702 ALA703 ASN704 LEU705 ARG706 THR707 SER708 ASN709 ASN710 THR711 TYR712 ALA713 PRO714 LEU715 LYS716 THR717 PRO718 VAL719 SER720 LEU721 TYR722 GLY723 SER724 ASP725 TYR726 GLY727 PHE728 HIS729 ALA730 GLY731 THR732 LEU733 LEU734 PHE735 ARG736 GLY737 ARG738 PHE739 THR740 ALA741 ARG742 THR743 ALA744 ARG745 GLN746 GLN747 LEU748 PHE749 LEU750 SER751 THR752 GLN753 GLY754 GLY755 SER756 ALA757 PHE758 ALA759 SER760 SER761 VAL762 TRP763 LEU764 ASN765 ASP766 ARG767 PHE768 ILE769 GLY770 SER771 PHE772 THR773 GLY774 PHE775 ASP776 ALA777 ALA778 SER779 ALA780 ALA781 ASN782 SER783 SER784 TYR785 THR786 LEU787 ASP788 ARG789 LEU790 VAL791 ARG792 GLY793 ARG794 ARG795 TYR796 ILE797 LEU798 THR799 VAL800 VAL801 VAL802 ASP803 SER804 THR805 GLY806 LEU807 ASP808 GLU809 ASN810 TRP811 THR812 THR813 GLY814 ASP815 ASP816 SER817 MET818 LYS819 ALA820 PRO821 ARG822 GLY823 ILE824 LEU825 ASP826 TYR827 ALA828 LEU829 THR830 SER831 SER832 SER833 GLY834 ALA835 ASN836 VAL837 SER838 ILE839 SER840 TRP841 LYS842 LEU843 THR844 GLY845 ASN846 LEU847 GLY848 GLY849 GLU850 ASP851 TYR852 ARG853 ASP854 VAL855 PHE856 ARG857 GLY858 PRO859 LEU860 ASN861 GLU862 GLY863 GLY864 LEU865 PHE866 PHE867 GLU868 ARG869 GLN870 GLY871 PHE872 HIS873 LEU874 PRO875 SER876 PRO877 PRO878 LEU879 SER880 ASP881 PHE882 THR883 HIS884 GLY885 PRO886 SER887 SER888 SER889 SER890 SER891 SER892 SER893 SER894 PRO895 LEU896 ASP897 GLY898 ILE899 ALA900 HIS901 ALA902 GLY903 ILE904 ALA905 PHE906 TYR907 ALA908 ALA909 LYS910 LEU911 PRO912 LEU913 HIS914 LEU915 PRO916 ALA917 GLN918 GLU919 TYR920 ASP921 ILE922 PRO923 LEU924 SER925 PHE926 VAL927 PHE928 ASP929 ASN930 ALA931 THR932 ALA933 ALA934 ALA935 PRO936 TYR937 ARG938 ALA939 LEU940 LEU941 TYR942 VAL943 ASN944 GLY945 PHE946 GLN947 TYR948 GLY949 LYS950 TYR951 VAL952 SER953 ASN954 ILE955 GLY956 PRO957 GLN958 THR959 GLU960 PHE961 PRO962 VAL963 PRO964 GLU965 GLY966 ILE967 LEU968 ASP969 TYR970 ASN971 GLY972 ASP973 ASN974 TRP975 ILE976 GLY977 VAL978 ALA979 LEU980 TRP981 ALA982 LEU983 GLU984 SER985 ARG986 GLY987 ALA988 LYS989 VAL990 PRO991 GLY992 LEU993 ALA994 LEU995 LYS996 SER997 LYS998 SER999 PRO1000 ILE1001 LEU1002 THR1003 GLY1004 ARG1005 GLU1006 ARG1007 VAL1008 GLU1009 VAL1010 VAL1011 LYS1012 GLY1013 PRO1014 HIS1015 PHE1016 LYS1017 LYS1018 ARG1019 HIS1020 GLY1021 ALA1022 TYR1023
Ligands
Unit 2 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 MAN7
Unit 3 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6 GLC7 MAN8 MAN9
Unit 4 NAG1 NAG2
Unit 5 IPT1024 NAG1041 NAG1042
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany