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Title | HUMAN PARP-1 ZINC FINGER 2 (ZN2) BOUND TO DNA | |
Keywords | PROTEIN-DNA COMPLEX, PARP ZINC FINGER, DNA BINDING PROTEIN-D COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3ODE | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | POLY [ADP-RIBOSE] POLYMERASE 1 | A | 91 | 726 | 0 |
2 | Protein | POLY [ADP-RIBOSE] POLYMERASE 1 | B | 93 | 738 | 0 |
3 | Other macromolecule | 5'-D(*CP*CP*CP*AP*AP*GP*CP*G)-3' | C | 8 | 159 | 0 |
4 | Other macromolecule | 5'-D(*CP*GP*CP*TP*TP*GP*GP*G)-3' | D | 8 | 163 | 0 |
5 | Other macromolecule | 5'-D(*CP*CP*CP*AP*AP*GP*CP*G)-3' | E | 8 | 159 | 0 |
6 | Other macromolecule | 5'-D(*CP*GP*CP*TP*TP*GP*GP*G)-3' | F | 8 | 163 | 0 |
7 | Ligand | POLY [ADP-RIBOSE] POLYMERASE 1 | A | 1 | 0 | 1 |
8 | Ligand | POLY [ADP-RIBOSE] POLYMERASE 1 | B | 1 | 0 | 1 |
9 | Water | 19 | 0 | 19 | ||
total | 237 | 2108 | 21 |
Unit 1 | LEU110 GLY111 ASP112 PHE113 ALA114 ALA115 GLU116 TYR117 ALA118 LYS119 SER120 ASN121 ARG122 SER123 THR124 CYS125 LYS126 GLY127 CYS128 MET129 GLU130 LYS131 ILE132 GLU133 LYS134 GLY135 GLN136 VAL137 ARG138 LEU139 SER140 LYS141 LYS142 MET143 VAL144 ASP145 PRO146 GLU147 LYS148 PRO149 GLN150 LEU151 GLY152 MET153 ILE154 ASP155 ARG156 TRP157 TYR158 HIS159 PRO160 GLY161 CYS162 PHE163 VAL164 LYS165 ASN166 ARG167 GLU168 GLU169 LEU170 GLY171 PHE172 ARG173 PRO174 GLU175 TYR176 SER177 ALA178 SER179 GLN180 LEU181 LYS182 GLY183 PHE184 SER185 LEU186 LEU187 ALA188 THR189 GLU190 ASP191 LYS192 GLU193 ALA194 LEU195 LYS196 LYS197 GLN198 LEU199 PRO200 |
Unit 2 | LYS108 THR109 LEU110 GLY111 ASP112 PHE113 ALA114 ALA115 GLU116 TYR117 ALA118 LYS119 SER120 ASN121 ARG122 SER123 THR124 CYS125 LYS126 GLY127 CYS128 MET129 GLU130 LYS131 ILE132 GLU133 LYS134 GLY135 GLN136 VAL137 ARG138 LEU139 SER140 LYS141 LYS142 MET143 VAL144 ASP145 PRO146 GLU147 LYS148 PRO149 GLN150 LEU151 GLY152 MET153 ILE154 ASP155 ARG156 TRP157 TYR158 HIS159 PRO160 GLY161 CYS162 PHE163 VAL164 LYS165 ASN166 ARG167 GLU168 GLU169 LEU170 GLY171 PHE172 ARG173 PRO174 GLU175 TYR176 SER177 ALA178 SER179 GLN180 LEU181 LYS182 GLY183 PHE184 SER185 LEU186 LEU187 ALA188 THR189 GLU190 ASP191 LYS192 GLU193 ALA194 LEU195 LYS196 LYS197 GLN198 LEU199 PRO200 |
Unit 3 | DC1 DC2 DC3 DA4 DA5 DG6 DC7 DG8 |
Unit 4 | DC1 DG2 DC3 DT4 DT5 DG6 DG7 DG8 |
Unit 5 | DC1 DC2 DC3 DA4 DA5 DG6 DC7 DG8 |
Unit 6 | DC1 DG2 DC3 DT4 DT5 DG6 DG7 DG8 |
Unit 7 | ZN701 |
Unit 8 | ZN701 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |