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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF FUMARATE LYASE:DELTA CRYSTALLIN FROM BR MELITENSIS BOUND TO COBALT
Keywords FUMARATE LYASE, FUMARASE, BRUCELLOSIS, ORCHITIS, EPIDIDYMITI MASTITIS, DEHYDRATION OF FUMARATE TO MALATE, KREB'S CYCLE, ACID CYCLE, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMIC FOR INFECTIOUS DISEASE, SSGCID, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3OCE     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FUMARATE LYASE:DELTA CRYSTALLIN  A 461 3453 0
2  Protein   FUMARATE LYASE:DELTA CRYSTALLIN  B 461 3451 0
3  Protein   FUMARATE LYASE:DELTA CRYSTALLIN  C 460 3425 0
4  Protein   FUMARATE LYASE:DELTA CRYSTALLIN  D 460 3446 0
5  Ligand   FUMARATE LYASE:DELTA CRYSTALLIN  A 5 0 8
6  Ligand   FUMARATE LYASE:DELTA CRYSTALLIN  B 4 0 4
7  Ligand   FUMARATE LYASE:DELTA CRYSTALLIN  C 4 0 4
8  Ligand   FUMARATE LYASE:DELTA CRYSTALLIN  D 4 0 4
9 Water     544 0 544
total       2403 13775 564
Proteins
Unit 1 MET1 THR2 ARG3 ARG4 GLU5 GLN6 ASP7 SER8 LEU9 GLY10 GLU11 ARG12 ASP13 ILE14 PRO15 MET16 ASP17 ALA18 TYR19 PHE20 GLY21 ILE22 GLN23 THR24 LEU25 ARG26 ALA27 VAL28 GLU29 ASN30 PHE31 SER32 LEU33 SER34 ASP35 VAL36 ALA37 LEU38 ASN39 HIS40 ILE41 PRO42 ALA43 LEU44 VAL45 ARG46 ALA47 LEU48 ALA49 MET50 VAL51 LYS52 LYS53 ALA54 ALA55 ALA56 THR57 ALA58 ASN59 TYR60 LYS61 LEU62 ARG63 GLN64 LEU65 PRO66 GLU67 PRO68 LYS69 TYR70 ALA71 ALA72 ILE73 VAL74 ALA75 ALA76 CYS77 ASP78 ASP79 ILE80 ILE81 ASP82 GLY83 LEU84 LEU85 MET86 GLU87 GLN88 PHE89 VAL90 VAL91 ASP92 VAL93 PHE94 GLN95 GLY96 GLY97 ALA98 GLY99 THR100 SER101 SER102 ASN103 MET104 ASN105 ALA106 ASN107 GLU108 VAL109 ILE110 ALA111 ASN112 ARG113 ALA114 LEU115 GLU116 HIS117 LEU118 GLY119 ARG120 PRO121 ARG122 GLY123 ASP124 TYR125 GLN126 THR127 ILE128 HIS129 PRO130 ASN131 ASP132 ASP133 VAL134 ASN135 MET136 SER137 GLN138 SER139 THR140 ASN141 ASP142 VAL143 TYR144 PRO145 THR146 ALA147 VAL148 ARG149 LEU150 ALA151 LEU152 LEU153 LEU154 SER155 GLN156 ASN157 GLN158 VAL159 GLN160 THR161 ALA162 LEU163 HIS164 ARG165 LEU166 ILE167 ALA168 ALA169 PHE170 GLU171 ALA172 LYS173 GLY174 ARG175 GLU176 PHE177 ALA178 THR179 VAL180 ILE181 LYS182 ILE183 GLY184 ARG185 THR186 GLN187 LEU188 GLN189 ASP190 ALA191 VAL192 PRO193 ILE194 THR195 LEU196 GLY197 GLN198 GLU199 PHE200 GLU201 ALA202 PHE203 ALA204 ALA205 THR206 LEU207 ARG208 GLU209 ASP210 THR211 ALA212 ARG213 LEU214 GLU215 GLU216 VAL217 ALA218 ALA219 LEU220 PHE221 ARG222 GLU223 VAL224 ASN225 LEU226 GLY227 GLY228 THR229 ALA230 ILE231 GLY232 THR233 ARG234 ILE235 ASN236 ALA237 SER238 HIS239 ALA240 TYR241 ALA242 GLU243 GLN244 ALA245 ILE246 VAL247 GLU248 LEU249 SER250 GLN251 ILE252 SER253 GLY254 ILE255 GLU256 LEU257 LYS258 ALA259 THR260 GLY261 ASN262 LEU263 VAL264 GLU265 ALA266 SER267 TRP268 ASP269 THR270 GLY271 ALA272 PHE273 VAL274 THR275 PHE276 SER277 GLY278 ILE279 LEU280 ARG281 ARG282 ILE283 ALA284 VAL285 LYS286 LEU287 SER288 LYS289 ILE290 ALA291 ASN292 ASP293 LEU294 ARG295 LEU296 LEU297 SER298 SER299 GLY300 PRO301 ARG302 SER303 GLY304 LEU305 GLY306 GLU307 ILE308 ARG309 LEU310 PRO311 ALA312 VAL313 GLN314 PRO315 GLY316 SER317 SER318 ILE319 MET320 PRO321 GLY322 LYS323 VAL324 ASN325 PRO326 VAL327 ILE328 PRO329 GLU330 SER331 VAL332 ASN333 GLN334 VAL335 CYS336 TYR337 GLN338 VAL339 ILE340 GLY341 ASN342 ASP343 LEU344 THR345 VAL346 THR347 MET348 ALA349 ALA350 GLU351 SER352 GLY353 GLN354 LEU355 GLN356 LEU357 ASN358 ALA359 PHE360 GLU361 PRO362 LEU363 ILE364 VAL365 TYR366 ASN367 ILE368 LEU369 SER370 SER371 MET372 ARG373 LEU374 LEU375 GLY376 ARG377 ALA378 MET379 THR380 ASN381 LEU382 ALA383 GLU384 ARG385 CYS386 VAL387 ASP388 GLY389 ILE390 GLU391 ALA392 ASN393 VAL394 GLU395 ARG396 CYS397 ARG398 ALA399 GLY400 ALA401 GLU402 GLU403 SER404 ILE405 SER406 LEU407 ALA408 THR409 ALA410 LEU411 VAL412 PRO413 VAL414 VAL415 GLY416 TYR417 ALA418 ARG419 ALA420 ALA421 GLU422 ILE423 ALA424 LYS425 GLN426 ALA427 LEU428 ALA429 SER430 GLY431 GLN432 THR433 VAL434 MET435 GLU436 VAL437 ALA438 ILE439 SER440 LYS441 GLY442 LEU443 ASP444 ALA445 SER446 ALA447 LEU448 THR449 ILE450 MET451 LEU452 ASP453 PRO454 LEU455 ARG456 MET457 ALA458 PHE459 PRO460 PRO461
Unit 2 MET1 THR2 ARG3 ARG4 GLU5 GLN6 ASP7 SER8 LEU9 GLY10 GLU11 ARG12 ASP13 ILE14 PRO15 MET16 ASP17 ALA18 TYR19 PHE20 GLY21 ILE22 GLN23 THR24 LEU25 ARG26 ALA27 VAL28 GLU29 ASN30 PHE31 SER32 LEU33 SER34 ASP35 VAL36 ALA37 LEU38 ASN39 HIS40 ILE41 PRO42 ALA43 LEU44 VAL45 ARG46 ALA47 LEU48 ALA49 MET50 VAL51 LYS52 LYS53 ALA54 ALA55 ALA56 THR57 ALA58 ASN59 TYR60 LYS61 LEU62 ARG63 GLN64 LEU65 PRO66 GLU67 PRO68 LYS69 TYR70 ALA71 ALA72 ILE73 VAL74 ALA75 ALA76 CYS77 ASP78 ASP79 ILE80 ILE81 ASP82 GLY83 LEU84 LEU85 MET86 GLU87 GLN88 PHE89 VAL90 VAL91 ASP92 VAL93 PHE94 GLN95 GLY96 GLY97 ALA98 GLY99 THR100 SER101 SER102 ASN103 MET104 ASN105 ALA106 ASN107 GLU108 VAL109 ILE110 ALA111 ASN112 ARG113 ALA114 LEU115 GLU116 HIS117 LEU118 GLY119 ARG120 PRO121 ARG122 GLY123 ASP124 TYR125 GLN126 THR127 ILE128 HIS129 PRO130 ASN131 ASP132 ASP133 VAL134 ASN135 MET136 SER137 GLN138 SER139 THR140 ASN141 ASP142 VAL143 TYR144 PRO145 THR146 ALA147 VAL148 ARG149 LEU150 ALA151 LEU152 LEU153 LEU154 SER155 GLN156 ASN157 GLN158 VAL159 GLN160 THR161 ALA162 LEU163 HIS164 ARG165 LEU166 ILE167 ALA168 ALA169 PHE170 GLU171 ALA172 LYS173 GLY174 ARG175 GLU176 PHE177 ALA178 THR179 VAL180 ILE181 LYS182 ILE183 GLY184 ARG185 THR186 GLN187 LEU188 GLN189 ASP190 ALA191 VAL192 PRO193 ILE194 THR195 LEU196 GLY197 GLN198 GLU199 PHE200 GLU201 ALA202 PHE203 ALA204 ALA205 THR206 LEU207 ARG208 GLU209 ASP210 THR211 ALA212 ARG213 LEU214 GLU215 GLU216 VAL217 ALA218 ALA219 LEU220 PHE221 ARG222 GLU223 VAL224 ASN225 LEU226 GLY227 GLY228 THR229 ALA230 ILE231 GLY232 THR233 ARG234 ILE235 ASN236 ALA237 SER238 HIS239 ALA240 TYR241 ALA242 GLU243 GLN244 ALA245 ILE246 VAL247 GLU248 LEU249 SER250 GLN251 ILE252 SER253 GLY254 ILE255 GLU256 LEU257 LYS258 ALA259 THR260 GLY261 ASN262 LEU263 VAL264 GLU265 ALA266 SER267 TRP268 ASP269 THR270 GLY271 ALA272 PHE273 VAL274 THR275 PHE276 SER277 GLY278 ILE279 LEU280 ARG281 ARG282 ILE283 ALA284 VAL285 LYS286 LEU287 SER288 LYS289 ILE290 ALA291 ASN292 ASP293 LEU294 ARG295 LEU296 LEU297 SER298 SER299 GLY300 PRO301 ARG302 SER303 GLY304 LEU305 GLY306 GLU307 ILE308 ARG309 LEU310 PRO311 ALA312 VAL313 GLN314 PRO315 GLY316 SER317 SER318 ILE319 MET320 PRO321 GLY322 LYS323 VAL324 ASN325 PRO326 VAL327 ILE328 PRO329 GLU330 SER331 VAL332 ASN333 GLN334 VAL335 CYS336 TYR337 GLN338 VAL339 ILE340 GLY341 ASN342 ASP343 LEU344 THR345 VAL346 THR347 MET348 ALA349 ALA350 GLU351 SER352 GLY353 GLN354 LEU355 GLN356 LEU357 ASN358 ALA359 PHE360 GLU361 PRO362 LEU363 ILE364 VAL365 TYR366 ASN367 ILE368 LEU369 SER370 SER371 MET372 ARG373 LEU374 LEU375 GLY376 ARG377 ALA378 MET379 THR380 ASN381 LEU382 ALA383 GLU384 ARG385 CYS386 VAL387 ASP388 GLY389 ILE390 GLU391 ALA392 ASN393 VAL394 GLU395 ARG396 CYS397 ARG398 ALA399 GLY400 ALA401 GLU402 GLU403 SER404 ILE405 SER406 LEU407 ALA408 THR409 ALA410 LEU411 VAL412 PRO413 VAL414 VAL415 GLY416 TYR417 ALA418 ARG419 ALA420 ALA421 GLU422 ILE423 ALA424 LYS425 GLN426 ALA427 LEU428 ALA429 SER430 GLY431 GLN432 THR433 VAL434 MET435 GLU436 VAL437 ALA438 ILE439 SER440 LYS441 GLY442 LEU443 ASP444 ALA445 SER446 ALA447 LEU448 THR449 ILE450 MET451 LEU452 ASP453 PRO454 LEU455 ARG456 MET457 ALA458 PHE459 PRO460 PRO461
Unit 3 MET1 THR2 ARG3 ARG4 GLU5 GLN6 ASP7 SER8 LEU9 GLY10 GLU11 ARG12 ASP13 ILE14 PRO15 MET16 ASP17 ALA18 TYR19 PHE20 GLY21 ILE22 GLN23 THR24 LEU25 ARG26 ALA27 VAL28 GLU29 ASN30 PHE31 SER32 LEU33 SER34 ASP35 VAL36 ALA37 LEU38 ASN39 HIS40 ILE41 PRO42 ALA43 LEU44 VAL45 ARG46 ALA47 LEU48 ALA49 MET50 VAL51 LYS52 LYS53 ALA54 ALA55 ALA56 THR57 ALA58 ASN59 TYR60 LYS61 LEU62 ARG63 GLN64 LEU65 PRO66 GLU67 PRO68 LYS69 TYR70 ALA71 ALA72 ILE73 VAL74 ALA75 ALA76 CYS77 ASP78 ASP79 ILE80 ILE81 ASP82 GLY83 LEU84 LEU85 MET86 GLU87 GLN88 PHE89 VAL90 VAL91 ASP92 VAL93 PHE94 GLN95 GLY96 GLY97 ALA98 GLY99 THR100 SER101 SER102 ASN103 MET104 ASN105 ALA106 ASN107 GLU108 VAL109 ILE110 ALA111 ASN112 ARG113 ALA114 LEU115 GLU116 HIS117 LEU118 GLY119 ARG120 PRO121 ARG122 GLY123 ASP124 TYR125 GLN126 THR127 ILE128 HIS129 PRO130 ASN131 ASP132 ASP133 VAL134 ASN135 MET136 SER137 GLN138 SER139 THR140 ASN141 ASP142 VAL143 TYR144 PRO145 THR146 ALA147 VAL148 ARG149 LEU150 ALA151 LEU152 LEU153 LEU154 SER155 GLN156 ASN157 GLN158 VAL159 GLN160 THR161 ALA162 LEU163 HIS164 ARG165 LEU166 ILE167 ALA168 ALA169 PHE170 GLU171 ALA172 LYS173 GLY174 ARG175 GLU176 PHE177 ALA178 THR179 VAL180 ILE181 LYS182 ILE183 GLY184 ARG185 THR186 GLN187 LEU188 GLN189 ASP190 ALA191 VAL192 PRO193 ILE194 THR195 LEU196 GLY197 GLN198 GLU199 PHE200 GLU201 ALA202 PHE203 ALA204 ALA205 THR206 LEU207 ARG208 GLU209 ASP210 THR211 ALA212 ARG213 LEU214 GLU215 GLU216 VAL217 ALA218 ALA219 LEU220 PHE221 ARG222 GLU223 VAL224 ASN225 LEU226 GLY227 GLY228 THR229 ALA230 ILE231 GLY232 THR233 ARG234 ILE235 ASN236 ALA237 SER238 HIS239 ALA240 TYR241 ALA242 GLU243 GLN244 ALA245 ILE246 VAL247 GLU248 LEU249 SER250 GLN251 ILE252 SER253 GLY254 ILE255 GLU256 LEU257 LYS258 ALA259 THR260 GLY261 ASN262 LEU263 VAL264 GLU265 ALA266 SER267 TRP268 ASP269 THR270 GLY271 ALA272 PHE273 VAL274 THR275 PHE276 SER277 GLY278 ILE279 LEU280 ARG281 ARG282 ILE283 ALA284 VAL285 LYS286 LEU287 SER288 LYS289 ILE290 ALA291 ASN292 ASP293 LEU294 ARG295 LEU296 LEU297 SER298 SER299 GLY300 PRO301 ARG302 SER303 GLY304 LEU305 GLY306 GLU307 ILE308 ARG309 LEU310 PRO311 ALA312 VAL313 GLN314 PRO315 GLY316 SER317 SER318 ILE319 MET320 PRO321 GLY322 LYS323 VAL324 ASN325 PRO326 VAL327 ILE328 PRO329 GLU330 SER331 VAL332 ASN333 GLN334 VAL335 CYS336 TYR337 GLN338 VAL339 ILE340 GLY341 ASN342 ASP343 LEU344 THR345 VAL346 THR347 MET348 ALA349 ALA350 GLU351 SER352 GLY353 GLN354 LEU355 GLN356 LEU357 ASN358 ALA359 PHE360 GLU361 PRO362 LEU363 ILE364 VAL365 TYR366 ASN367 ILE368 LEU369 SER370 SER371 MET372 ARG373 LEU374 LEU375 GLY376 ARG377 ALA378 MET379 THR380 ASN381 LEU382 ALA383 GLU384 ARG385 CYS386 VAL387 ASP388 GLY389 ILE390 GLU391 ALA392 ASN393 VAL394 GLU395 ARG396 CYS397 ARG398 ALA399 GLY400 ALA401 GLU402 GLU403 SER404 ILE405 SER406 LEU407 ALA408 THR409 ALA410 LEU411 VAL412 PRO413 VAL414 VAL415 GLY416 TYR417 ALA418 ARG419 ALA420 ALA421 GLU422 ILE423 ALA424 LYS425 GLN426 ALA427 LEU428 ALA429 SER430 GLY431 GLN432 THR433 VAL434 MET435 GLU436 VAL437 ALA438 ILE439 SER440 LYS441 GLY442 LEU443 ASP444 ALA445 SER446 ALA447 LEU448 THR449 ILE450 MET451 LEU452 ASP453 PRO454 LEU455 ARG456 MET457 ALA458 PHE459 PRO460
Unit 4 MET1 THR2 ARG3 ARG4 GLU5 GLN6 ASP7 SER8 LEU9 GLY10 GLU11 ARG12 ASP13 ILE14 PRO15 MET16 ASP17 ALA18 TYR19 PHE20 GLY21 ILE22 GLN23 THR24 LEU25 ARG26 ALA27 VAL28 GLU29 ASN30 PHE31 SER32 LEU33 SER34 ASP35 VAL36 ALA37 LEU38 ASN39 HIS40 ILE41 PRO42 ALA43 LEU44 VAL45 ARG46 ALA47 LEU48 ALA49 MET50 VAL51 LYS52 LYS53 ALA54 ALA55 ALA56 THR57 ALA58 ASN59 TYR60 LYS61 LEU62 ARG63 GLN64 LEU65 PRO66 GLU67 PRO68 LYS69 TYR70 ALA71 ALA72 ILE73 VAL74 ALA75 ALA76 CYS77 ASP78 ASP79 ILE80 ILE81 ASP82 GLY83 LEU84 LEU85 MET86 GLU87 GLN88 PHE89 VAL90 VAL91 ASP92 VAL93 PHE94 GLN95 GLY96 GLY97 ALA98 GLY99 THR100 SER101 SER102 ASN103 MET104 ASN105 ALA106 ASN107 GLU108 VAL109 ILE110 ALA111 ASN112 ARG113 ALA114 LEU115 GLU116 HIS117 LEU118 GLY119 ARG120 PRO121 ARG122 GLY123 ASP124 TYR125 GLN126 THR127 ILE128 HIS129 PRO130 ASN131 ASP132 ASP133 VAL134 ASN135 MET136 SER137 GLN138 SER139 THR140 ASN141 ASP142 VAL143 TYR144 PRO145 THR146 ALA147 VAL148 ARG149 LEU150 ALA151 LEU152 LEU153 LEU154 SER155 GLN156 ASN157 GLN158 VAL159 GLN160 THR161 ALA162 LEU163 HIS164 ARG165 LEU166 ILE167 ALA168 ALA169 PHE170 GLU171 ALA172 LYS173 GLY174 ARG175 GLU176 PHE177 ALA178 THR179 VAL180 ILE181 LYS182 ILE183 GLY184 ARG185 THR186 GLN187 LEU188 GLN189 ASP190 ALA191 VAL192 PRO193 ILE194 THR195 LEU196 GLY197 GLN198 GLU199 PHE200 GLU201 ALA202 PHE203 ALA204 ALA205 THR206 LEU207 ARG208 GLU209 ASP210 THR211 ALA212 ARG213 LEU214 GLU215 GLU216 VAL217 ALA218 ALA219 LEU220 PHE221 ARG222 GLU223 VAL224 ASN225 LEU226 GLY227 GLY228 THR229 ALA230 ILE231 GLY232 THR233 ARG234 ILE235 ASN236 ALA237 SER238 HIS239 ALA240 TYR241 ALA242 GLU243 GLN244 ALA245 ILE246 VAL247 GLU248 LEU249 SER250 GLN251 ILE252 SER253 GLY254 ILE255 GLU256 LEU257 LYS258 ALA259 THR260 GLY261 ASN262 LEU263 VAL264 GLU265 ALA266 SER267 TRP268 ASP269 THR270 GLY271 ALA272 PHE273 VAL274 THR275 PHE276 SER277 GLY278 ILE279 LEU280 ARG281 ARG282 ILE283 ALA284 VAL285 LYS286 LEU287 SER288 LYS289 ILE290 ALA291 ASN292 ASP293 LEU294 ARG295 LEU296 LEU297 SER298 SER299 GLY300 PRO301 ARG302 SER303 GLY304 LEU305 GLY306 GLU307 ILE308 ARG309 LEU310 PRO311 ALA312 VAL313 GLN314 PRO315 GLY316 SER317 SER318 ILE319 MET320 PRO321 GLY322 LYS323 VAL324 ASN325 PRO326 VAL327 ILE328 PRO329 GLU330 SER331 VAL332 ASN333 GLN334 VAL335 CYS336 TYR337 GLN338 VAL339 ILE340 GLY341 ASN342 ASP343 LEU344 THR345 VAL346 THR347 MET348 ALA349 ALA350 GLU351 SER352 GLY353 GLN354 LEU355 GLN356 LEU357 ASN358 ALA359 PHE360 GLU361 PRO362 LEU363 ILE364 VAL365 TYR366 ASN367 ILE368 LEU369 SER370 SER371 MET372 ARG373 LEU374 LEU375 GLY376 ARG377 ALA378 MET379 THR380 ASN381 LEU382 ALA383 GLU384 ARG385 CYS386 VAL387 ASP388 GLY389 ILE390 GLU391 ALA392 ASN393 VAL394 GLU395 ARG396 CYS397 ARG398 ALA399 GLY400 ALA401 GLU402 GLU403 SER404 ILE405 SER406 LEU407 ALA408 THR409 ALA410 LEU411 VAL412 PRO413 VAL414 VAL415 GLY416 TYR417 ALA418 ARG419 ALA420 ALA421 GLU422 ILE423 ALA424 LYS425 GLN426 ALA427 LEU428 ALA429 SER430 GLY431 GLN432 THR433 VAL434 MET435 GLU436 VAL437 ALA438 ILE439 SER440 LYS441 GLY442 LEU443 ASP444 ALA445 SER446 ALA447 LEU448 THR449 ILE450 MET451 LEU452 ASP453 PRO454 LEU455 ARG456 MET457 ALA458 PHE459 PRO460
Ligands
Unit 5 CO471 CO472 CO473 CL474 EDO475
Unit 6 CO471 CO472 CO473 CL474
Unit 7 CO471 CO472 CO473 CL474
Unit 8 CO471 CO472 CO473 CL474
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany