3O4L - Sequence, Chains, Asymmetric and Biological Units

• Title: GENETIC AND STRUCTURAL BASIS FOR SELECTION OF A UBIQUITOUS T RECEPTOR DEPLOYED IN EPSTEIN-BARR VIRUS
• Keywords: MHC I, IMMUNOGLOBULIN, ANTIGEN PRESENTATION, IMMUNE RECOGNIT IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3O4L	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MHC CLASS I ANTIGEN	A	276	2254	0
2	Protein	BETA-2-MICROGLOBULIN	B	100	834	0
3	Protein	BSLF2/BMLF1 PROTEIN	C	9	62	0
4	Protein	T-CELL RECEPTOR, ALPHA CHAIN	D	195	1538	0
5	Protein	T-CELL RECEPTOR, BETA CHAIN	E	245	1930	0
6	Ligand	MHC CLASS I ANTIGEN	A	5	0	28
7	Ligand	BETA-2-MICROGLOBULIN	B	4	0	28
8	Ligand	T-CELL RECEPTOR, ALPHA CHAIN	D	2	0	12
9	Ligand	T-CELL RECEPTOR, BETA CHAIN	E	8	0	45
10	Water			334	0	334
total				1178	6618	447

Proteins

Unit 1	GLY 1 SER 2 HIS 3 SER 4 MET 5 ARG 6 TYR 7 PHE 8 PHE 9 THR 10 SER 11 VAL 12 SER 13 ARG 14 PRO 15 GLY 16 ARG 17 GLY 18 GLU 19 PRO 20 ARG 21 PHE 22 ILE 23 ALA 24 VAL 25 GLY 26 TYR 27 VAL 28 ASP 29 ASP 30 THR 31 GLN 32 PHE 33 VAL 34 ARG 35 PHE 36 ASP 37 SER 38 ASP 39 ALA 40 ALA 41 SER 42 GLN 43 ARG 44 MET 45 GLU 46 PRO 47 ARG 48 ALA 49 PRO 50 TRP 51 ILE 52 GLU 53 GLN 54 GLU 55 GLY 56 PRO 57 GLU 58 TYR 59 TRP 60 ASP 61 GLY 62 GLU 63 THR 64 ARG 65 LYS 66 VAL 67 LYS 68 ALA 69 HIS 70 SER 71 GLN 72 THR 73 HIS 74 ARG 75 VAL 76 ASP 77 LEU 78 GLY 79 THR 80 LEU 81 ARG 82 GLY 83 TYR 84 TYR 85 ASN 86 GLN 87 SER 88 GLU 89 ALA 90 GLY 91 SER 92 HIS 93 THR 94 VAL 95 GLN 96 ARG 97 MET 98 TYR 99 GLY 100 CYS 101 ASP 102 VAL 103 GLY 104 SER 105 ASP 106 TRP 107 ARG 108 PHE 109 LEU 110 ARG 111 GLY 112 TYR 113 HIS 114 GLN 115 TYR 116 ALA 117 TYR 118 ASP 119 GLY 120 LYS 121 ASP 122 TYR 123 ILE 124 ALA 125 LEU 126 LYS 127 GLU 128 ASP 129 LEU 130 ARG 131 SER 132 TRP 133 THR 134 ALA 135 ALA 136 ASP 137 MET 138 ALA 139 ALA 140 GLN 141 THR 142 THR 143 LYS 144 HIS 145 LYS 146 TRP 147 GLU 148 ALA 149 ALA 150 HIS 151 VAL 152 ALA 153 GLU 154 GLN 155 LEU 156 ARG 157 ALA 158 TYR 159 LEU 160 GLU 161 GLY 162 THR 163 CYS 164 VAL 165 GLU 166 TRP 167 LEU 168 ARG 169 ARG 170 TYR 171 LEU 172 GLU 173 ASN 174 GLY 175 LYS 176 GLU 177 THR 178 LEU 179 GLN 180 ARG 181 THR 182 ASP 183 ALA 184 PRO 185 LYS 186 THR 187 HIS 188 MET 189 THR 190 HIS 191 HIS 192 ALA 193 VAL 194 SER 195 ASP 196 HIS 197 GLU 198 ALA 199 THR 200 LEU 201 ARG 202 CYS 203 TRP 204 ALA 205 LEU 206 SER 207 PHE 208 TYR 209 PRO 210 ALA 211 GLU 212 ILE 213 THR 214 LEU 215 THR 216 TRP 217 GLN 218 ARG 219 ASP 220 GLY 221 GLU 222 ASP 223 GLN 224 THR 225 GLN 226 ASP 227 THR 228 GLU 229 LEU 230 VAL 231 GLU 232 THR 233 ARG 234 PRO 235 ALA 236 GLY 237 ASP 238 GLY 239 THR 240 PHE 241 GLN 242 LYS 243 TRP 244 ALA 245 ALA 246 VAL 247 VAL 248 VAL 249 PRO 250 SER 251 GLY 252 GLN 253 GLU 254 GLN 255 ARG 256 TYR 257 THR 258 CYS 259 HIS 260 VAL 261 GLN 262 HIS 263 GLU 264 GLY 265 LEU 266 PRO 267 LYS 268 PRO 269 LEU 270 THR 271 LEU 272 ARG 273 TRP 274 GLU 275 PRO 276
Unit 2	MET 0 ILE 1 GLN 2 ARG 3 THR 4 PRO 5 LYS 6 ILE 7 GLN 8 VAL 9 TYR 10 SER 11 ARG 12 HIS 13 PRO 14 ALA 15 GLU 16 ASN 17 GLY 18 LYS 19 SER 20 ASN 21 PHE 22 LEU 23 ASN 24 CYS 25 TYR 26 VAL 27 SER 28 GLY 29 PHE 30 HIS 31 PRO 32 SER 33 ASP 34 ILE 35 GLU 36 VAL 37 ASP 38 LEU 39 LEU 40 LYS 41 ASN 42 GLY 43 GLU 44 ARG 45 ILE 46 GLU 47 LYS 48 VAL 49 GLU 50 HIS 51 SER 52 ASP 53 LEU 54 SER 55 PHE 56 SER 57 LYS 58 ASP 59 TRP 60 SER 61 PHE 62 TYR 63 LEU 64 LEU 65 TYR 66 TYR 67 THR 68 GLU 69 PHE 70 THR 71 PRO 72 THR 73 GLU 74 LYS 75 ASP 76 GLU 77 TYR 78 ALA 79 CYS 80 ARG 81 VAL 82 ASN 83 HIS 84 VAL 85 THR 86 LEU 87 SER 88 GLN 89 PRO 90 CYS 91 ILE 92 VAL 93 LYS 94 TRP 95 ASP 96 ARG 97 ASP 98 MET 99
Unit 3	GLY 1 LEU 2 CYS 3 THR 4 LEU 5 VAL 6 ALA 7 MET 8 LEU 9
Unit 4	GLN 7 SER 8 LEU 9 PHE 10 LEU 11 SER 12 VAL 13 ARG 14 GLU 15 GLY 16 ASP 17 SER 18 SER 19 VAL 20 ILE 21 ASN 22 CYS 23 THR 24 TYR 25 THR 26 ASP 27 SER 28 SER 29 SER 30 THR 31 TYR 32 LEU 33 TYR 34 TRP 35 TYR 36 LYS 37 GLN 38 GLU 39 PRO 40 GLY 41 ALA 42 GLY 43 LEU 44 GLN 45 LEU 46 LEU 47 THR 48 TYR 49 ILE 50 PHE 51 SER 52 ASN 53 MET 54 ASP 55 MET 56 LYS 57 GLN 58 ASP 59 GLN 60 ARG 61 LYS 62 THR 63 VAL 64 LEU 65 LEU 66 ASN 67 LYS 68 LYS 69 ASP 70 LYS 71 HIS 72 LEU 73 SER 74 LEU 75 ARG 76 ILE 77 ALA 78 ASP 79 THR 80 GLN 81 THR 82 GLY 83 ASP 84 SER 85 ALA 86 ILE 87 TYR 88 PHE 89 CYS 90 ALA 91 GLU 92 ASP 93 ASN 94 ASN 95 ALA 96 ARG 97 LEU 98 MET 99 PHE 100 GLY 101 ASP 102 GLY 103 THR 104 GLN 105 LEU 106 VAL 107 VAL 108 LYS 109 PRO 110 ASN 111 ILE 112 GLN 113 ASN 114 PRO 115 ASP 116 PRO 117 ALA 118 VAL 119 TYR 120 GLN 121 LEU 122 ARG 123 ASP 124 SER 125 LYS 126 SER 127 SER 128 ASP 129 LYS 130 SER 131 VAL 132 CYS 133 LEU 134 PHE 135 THR 136 ASP 137 PHE 138 ASP 139 SER 140 GLN 141 THR 142 ASN 143 VAL 144 SER 145 GLN 146 SER 147 LYS 148 ASP 149 SER 150 ASP 151 VAL 152 TYR 153 ILE 154 THR 155 ASP 156 LYS 157 CYS 158 VAL 159 LEU 160 ASP 161 MET 162 ARG 163 SER 164 MET 165 ASP 166 PHE 167 LYS 168 SER 169 ASN 170 SER 171 ALA 172 VAL 173 ALA 174 TRP 175 SER 176 ASN 177 LYS 178 SER 179 ASP 180 PHE 181 ALA 182 CYS 183 ALA 184 ASN 185 ALA 186 PHE 187 ASN 188 ASN 189 SER 190 ILE 191 ILE 192 PRO 193 GLU 194 ASP 195 THR 196 PHE 197 PHE 198 PRO 199 SER 200 PRO 201
Unit 5	GLY 2 ALA 3 VAL 4 VAL 5 SER 6 GLN 7 HIS 8 PRO 9 SER 10 TRP 11 VAL 12 ILE 13 CYS 14 LYS 15 SER 16 GLY 17 THR 18 SER 19 VAL 20 LYS 21 ILE 22 GLU 23 CYS 24 ARG 25 SER 26 LEU 27 ASP 28 PHE 29 GLN 30 ALA 31 THR 32 THR 33 MET 34 PHE 35 TRP 36 TYR 37 ARG 38 GLN 39 PHE 40 PRO 41 LYS 42 GLN 43 SER 44 LEU 45 MET 46 LEU 47 MET 48 ALA 49 THR 50 SER 51 ASN 52 GLU 53 GLY 54 SER 55 LYS 56 ALA 57 THR 58 TYR 59 GLU 60 GLN 61 GLY 62 VAL 63 GLU 64 LYS 65 ASP 66 LYS 67 PHE 68 LEU 69 ILE 70 ASN 71 HIS 72 ALA 73 SER 74 LEU 75 THR 76 LEU 77 SER 78 THR 79 LEU 80 THR 81 VAL 82 THR 83 SER 84 ALA 85 HIS 86 PRO 87 GLU 88 ASP 89 SER 90 SER 91 PHE 92 TYR 93 ILE 94 CYS 95 SER 96 ALA 97 ARG 98 ASP 99 GLY 100 THR 101 GLY 102 ASN 103 GLY 104 TYR 105 THR 106 PHE 107 GLY 108 SER 109 GLY 110 THR 111 ARG 112 LEU 113 THR 114 VAL 115 VAL 116 GLU 117 ASP 118 LEU 119 ASN 120 LYS 121 VAL 122 PHE 123 PRO 124 PRO 125 GLU 126 VAL 127 ALA 128 VAL 129 PHE 130 GLU 131 PRO 132 SER 133 GLU 134 ALA 135 GLU 136 ILE 137 SER 138 HIS 139 THR 140 GLN 141 LYS 142 ALA 143 THR 144 LEU 145 VAL 146 CYS 147 LEU 148 ALA 149 THR 150 GLY 151 PHE 152 TYR 153 PRO 154 ASP 155 HIS 156 VAL 157 GLU 158 LEU 159 SER 160 TRP 161 TRP 162 VAL 163 ASN 164 GLY 165 LYS 166 GLU 167 VAL 168 HIS 169 SER 170 GLY 171 VAL 172 CYS 173 THR 174 ASP 175 PRO 176 GLN 177 PRO 178 LEU 179 LYS 180 GLU 181 GLN 182 PRO 183 ALA 184 LEU 185 ASN 186 ASP 187 SER 188 ARG 189 TYR 190 ALA 191 LEU 192 SER 193 SER 194 ARG 195 LEU 196 ARG 197 VAL 198 SER 199 ALA 200 THR 201 PHE 202 TRP 203 GLN 204 ASP 205 PRO 206 ARG 207 ASN 208 HIS 209 PHE 210 ARG 211 CYS 212 GLN 213 VAL 214 GLN 215 PHE 216 TYR 217 GLY 218 LEU 219 SER 220 GLU 221 ASN 222 ASP 223 GLU 224 TRP 225 THR 226 GLN 227 ASP 228 ARG 229 ALA 230 LYS 231 PRO 232 VAL 233 THR 234 GLN 235 ILE 236 VAL 237 SER 238 ALA 239 GLU 240 ALA 241 TRP 242 GLY 243 ARG 244 ALA 245 ASP 246

Ligands

Unit 6	GOL 277 GOL 278 GOL 279 SO4 280 SO4 281
Unit 7	MES 100 GOL 101 SO4 102 SO4 103
Unit 8	GOL 6 GOL 202
Unit 9	GOL 1 GOL 247 GOL 248 GOL 249 GOL 250 SO4 251 SO4 252 SO4 253