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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TRIM24 PHD-BROMO COMPLEXED WITH H3(1-10 PEPTIDE
Keywords TRIM24, PHD FINGER, BROMODOMAIN, UNMODIFIED H3K4, BREAST CAN TRANSCRIPTION, TRANSCRIPTION-PROTEIN BINDING COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3O37     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA  A 175 1428 0
2  Protein   TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA  B 180 1462 0
3  Protein   TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA  C 176 1435 0
4  Protein   TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA  D 174 1419 0
5  Protein   HISTONE H3.1  E 10 80 0
6  Protein   HISTONE H3.1  F 10 80 0
7  Protein   HISTONE H3.1  G 10 80 0
8  Protein   HISTONE H3.1  H 10 80 0
9  Ligand   TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA  A 2 0 2
10  Ligand   TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA  B 2 0 2
11  Ligand   TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA  C 2 0 2
12  Ligand   TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA  D 2 0 2
13 Water     236 0 236
total       989 6064 244

Proteins
Unit 1 ASN825 GLU826 ASP827 TRP828 CYS829 ALA830 VAL831 CYS832 GLN833 ASN834 GLY835 GLY836 GLU837 LEU838 LEU839 CYS840 CYS841 GLU842 LYS843 CYS844 PRO845 LYS846 VAL847 PHE848 HIS849 LEU850 SER851 CYS852 HIS853 VAL854 PRO855 THR856 LEU857 THR858 ASN859 PHE860 PRO861 SER862 GLY863 GLU864 TRP865 ILE866 CYS867 THR868 PHE869 CYS870 ARG871 ASP872 LEU873 SER874 LYS875 PRO876 GLU877 VAL878 GLU879 TYR880 ASP881 CYS882 GLU890 LYS891 LYS892 LYS893 THR894 GLU895 GLY896 LEU897 VAL898 LYS899 LEU900 THR901 PRO902 ILE903 ASP904 LYS905 ARG906 LYS907 CYS908 GLU909 ARG910 LEU911 LEU912 LEU913 PHE914 LEU915 TYR916 CYS917 HIS918 GLU919 MET920 SER921 LEU922 ALA923 PHE924 GLN925 ASP926 PRO927 VAL928 PRO929 LEU930 THR931 VAL932 PRO933 ASP934 TYR935 TYR936 LYS937 ILE938 ILE939 LYS940 ASN941 PRO942 MET943 ASP944 LEU945 SER946 THR947 ILE948 LYS949 LYS950 ARG951 LEU952 GLN953 GLU954 ASP955 TYR956 SER957 MET958 TYR959 SER960 LYS961 PRO962 GLU963 ASP964 PHE965 VAL966 ALA967 ASP968 PHE969 ARG970 LEU971 ILE972 PHE973 GLN974 ASN975 CYS976 ALA977 GLU978 PHE979 ASN980 GLU981 PRO982 ASP983 SER984 GLU985 VAL986 ALA987 ASN988 ALA989 GLY990 ILE991 LYS992 LEU993 GLU994 ASN995 TYR996 PHE997 GLU998 GLU999 LEU1000 LEU1001 LYS1002 ASN1003 LEU1004 TYR1005 PRO1006
Unit 2 ASN825 GLU826 ASP827 TRP828 CYS829 ALA830 VAL831 CYS832 GLN833 ASN834 GLY835 GLY836 GLU837 LEU838 LEU839 CYS840 CYS841 GLU842 LYS843 CYS844 PRO845 LYS846 VAL847 PHE848 HIS849 LEU850 SER851 CYS852 HIS853 VAL854 PRO855 THR856 LEU857 THR858 ASN859 PHE860 PRO861 SER862 GLY863 GLU864 TRP865 ILE866 CYS867 THR868 PHE869 CYS870 ARG871 ASP872 LEU873 SER874 LYS875 PRO876 GLU877 VAL878 GLU879 TYR880 ASP881 CYS882 ASP883 ALA884 PRO885 ASN888 SER889 GLU890 LYS891 LYS892 LYS893 THR894 GLU895 GLY896 LEU897 VAL898 LYS899 LEU900 THR901 PRO902 ILE903 ASP904 LYS905 ARG906 LYS907 CYS908 GLU909 ARG910 LEU911 LEU912 LEU913 PHE914 LEU915 TYR916 CYS917 HIS918 GLU919 MET920 SER921 LEU922 ALA923 PHE924 GLN925 ASP926 PRO927 VAL928 PRO929 LEU930 THR931 VAL932 PRO933 ASP934 TYR935 TYR936 LYS937 ILE938 ILE939 LYS940 ASN941 PRO942 MET943 ASP944 LEU945 SER946 THR947 ILE948 LYS949 LYS950 ARG951 LEU952 GLN953 GLU954 ASP955 TYR956 SER957 MET958 TYR959 SER960 LYS961 PRO962 GLU963 ASP964 PHE965 VAL966 ALA967 ASP968 PHE969 ARG970 LEU971 ILE972 PHE973 GLN974 ASN975 CYS976 ALA977 GLU978 PHE979 ASN980 GLU981 PRO982 ASP983 SER984 GLU985 VAL986 ALA987 ASN988 ALA989 GLY990 ILE991 LYS992 LEU993 GLU994 ASN995 TYR996 PHE997 GLU998 GLU999 LEU1000 LEU1001 LYS1002 ASN1003 LEU1004 TYR1005 PRO1006
Unit 3 PRO824 ASN825 GLU826 ASP827 TRP828 CYS829 ALA830 VAL831 CYS832 GLN833 ASN834 GLY835 GLY836 GLU837 LEU838 LEU839 CYS840 CYS841 GLU842 LYS843 CYS844 PRO845 LYS846 VAL847 PHE848 HIS849 LEU850 SER851 CYS852 HIS853 VAL854 PRO855 THR856 LEU857 THR858 ASN859 PHE860 PRO861 SER862 GLY863 GLU864 TRP865 ILE866 CYS867 THR868 PHE869 CYS870 ARG871 ASP872 LEU873 SER874 LYS875 PRO876 GLU877 VAL878 GLU879 TYR880 ASP881 CYS882 GLU890 LYS891 LYS892 LYS893 THR894 GLU895 GLY896 LEU897 VAL898 LYS899 LEU900 THR901 PRO902 ILE903 ASP904 LYS905 ARG906 LYS907 CYS908 GLU909 ARG910 LEU911 LEU912 LEU913 PHE914 LEU915 TYR916 CYS917 HIS918 GLU919 MET920 SER921 LEU922 ALA923 PHE924 GLN925 ASP926 PRO927 VAL928 PRO929 LEU930 THR931 VAL932 PRO933 ASP934 TYR935 TYR936 LYS937 ILE938 ILE939 LYS940 ASN941 PRO942 MET943 ASP944 LEU945 SER946 THR947 ILE948 LYS949 LYS950 ARG951 LEU952 GLN953 GLU954 ASP955 TYR956 SER957 MET958 TYR959 SER960 LYS961 PRO962 GLU963 ASP964 PHE965 VAL966 ALA967 ASP968 PHE969 ARG970 LEU971 ILE972 PHE973 GLN974 ASN975 CYS976 ALA977 GLU978 PHE979 ASN980 GLU981 PRO982 ASP983 SER984 GLU985 VAL986 ALA987 ASN988 ALA989 GLY990 ILE991 LYS992 LEU993 GLU994 ASN995 TYR996 PHE997 GLU998 GLU999 LEU1000 LEU1001 LYS1002 ASN1003 LEU1004 TYR1005 PRO1006
Unit 4 ASN825 GLU826 ASP827 TRP828 CYS829 ALA830 VAL831 CYS832 GLN833 ASN834 GLY835 GLY836 GLU837 LEU838 LEU839 CYS840 CYS841 GLU842 LYS843 CYS844 PRO845 LYS846 VAL847 PHE848 HIS849 LEU850 SER851 CYS852 HIS853 VAL854 PRO855 THR856 LEU857 THR858 ASN859 PHE860 PRO861 SER862 GLY863 GLU864 TRP865 ILE866 CYS867 THR868 PHE869 CYS870 ARG871 ASP872 LEU873 SER874 LYS875 PRO876 GLU877 VAL878 GLU879 TYR880 ASP881 CYS882 LYS891 LYS892 LYS893 THR894 GLU895 GLY896 LEU897 VAL898 LYS899 LEU900 THR901 PRO902 ILE903 ASP904 LYS905 ARG906 LYS907 CYS908 GLU909 ARG910 LEU911 LEU912 LEU913 PHE914 LEU915 TYR916 CYS917 HIS918 GLU919 MET920 SER921 LEU922 ALA923 PHE924 GLN925 ASP926 PRO927 VAL928 PRO929 LEU930 THR931 VAL932 PRO933 ASP934 TYR935 TYR936 LYS937 ILE938 ILE939 LYS940 ASN941 PRO942 MET943 ASP944 LEU945 SER946 THR947 ILE948 LYS949 LYS950 ARG951 LEU952 GLN953 GLU954 ASP955 TYR956 SER957 MET958 TYR959 SER960 LYS961 PRO962 GLU963 ASP964 PHE965 VAL966 ALA967 ASP968 PHE969 ARG970 LEU971 ILE972 PHE973 GLN974 ASN975 CYS976 ALA977 GLU978 PHE979 ASN980 GLU981 PRO982 ASP983 SER984 GLU985 VAL986 ALA987 ASN988 ALA989 GLY990 ILE991 LYS992 LEU993 GLU994 ASN995 TYR996 PHE997 GLU998 GLU999 LEU1000 LEU1001 LYS1002 ASN1003 LEU1004 TYR1005 PRO1006
Unit 5 ALA1 ARG2 THR3 LYS4 GLN5 THR6 ALA7 ARG8 LYS9 SER10
Unit 6 ALA1 ARG2 THR3 LYS4 GLN5 THR6 ALA7 ARG8 LYS9 SER10
Unit 7 ALA1 ARG2 THR3 LYS4 GLN5 THR6 ALA7 ARG8 LYS9 SER10
Unit 8 ALA1 ARG2 THR3 LYS4 GLN5 THR6 ALA7 ARG8 LYS9 SER10

Ligands
Unit 9 ZN1 ZN2
Unit 10 ZN1 ZN2
Unit 11 ZN1 ZN2
Unit 12 ZN1 ZN2

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany