3O07 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF YEAST PYRIDOXAL 5-PHOSPHATE SYNTHASE SN COMPLEXED WITH SUBSTRATE G3P
• Keywords: (BETA/ALPHA)8-BARREL, PYRIDOXAL 5-PHOSPHATE SYNTHASE, PLP G3 SNO1, BIOSYNTHETIC PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3O07	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PYRIDOXINE BIOSYNTHESIS PROTEIN SNZ1	A	259	1941	0
2	Protein	PYRIDOXINE BIOSYNTHESIS PROTEIN SNZ1	B	257	1924	0
3	Protein	PYRIDOXINE BIOSYNTHESIS PROTEIN SNZ1	C	259	1941	0
4	Ligand	PYRIDOXINE BIOSYNTHESIS PROTEIN SNZ1	A	1	0	10
5	Ligand	PYRIDOXINE BIOSYNTHESIS PROTEIN SNZ1	B	1	0	10
6	Ligand	PYRIDOXINE BIOSYNTHESIS PROTEIN SNZ1	C	1	0	10
7	Water			753	0	753
total				1531	5806	783

Proteins

Unit 1	LEU 16 LYS 17 GLY 18 GLY 19 VAL 20 ILE 21 MET 22 ASP 23 VAL 24 VAL 25 THR 26 PRO 27 GLU 28 GLN 29 ALA 30 LYS 31 ILE 32 ALA 33 GLU 34 LYS 35 SER 36 GLY 37 ALA 38 CYS 39 ALA 40 VAL 41 MET 42 ALA 43 LEU 44 GLU 45 SER 46 ILE 47 PRO 48 ALA 49 ASP 50 MET 51 ARG 52 LYS 53 SER 54 GLY 55 LYS 56 VAL 57 CYS 58 ARG 59 MET 60 SER 61 ASP 62 PRO 63 LYS 64 MET 65 ILE 66 LYS 67 ASP 68 ILE 69 MET 70 ASN 71 SER 72 VAL 73 SER 74 ILE 75 PRO 76 VAL 77 MET 78 ALA 79 LYS 80 VAL 81 ARG 82 ILE 83 GLY 84 HIS 85 PHE 86 VAL 87 GLU 88 ALA 89 GLN 90 ILE 91 ILE 92 GLU 93 ALA 94 LEU 95 GLU 96 VAL 97 ASP 98 TYR 99 ILE 100 ASP 101 GLU 102 SER 103 GLU 104 VAL 105 LEU 106 THR 107 PRO 108 ALA 109 ASP 110 TRP 111 THR 112 HIS 113 HIS 114 ILE 115 GLU 116 LYS 117 ASP 118 LYS 119 PHE 120 LYS 121 VAL 122 PRO 123 PHE 124 VAL 125 CYS 126 GLY 127 ALA 128 LYS 129 ASP 130 LEU 131 GLY 132 GLU 133 ALA 134 LEU 135 ARG 136 ARG 137 ILE 138 ASN 139 GLU 140 GLY 141 ALA 142 ALA 143 MET 144 ILE 145 ARG 146 THR 147 LYS 148 GLY 149 GLU 150 ALA 151 GLY 152 THR 153 GLY 154 ASP 155 VAL 156 SER 157 GLU 158 ALA 159 VAL 160 LYS 161 HIS 162 ILE 163 ARG 164 ARG 165 ILE 166 THR 167 GLU 168 GLU 169 ILE 170 LYS 171 ALA 172 CYS 173 GLN 174 GLN 175 LEU 176 LYS 177 SER 178 GLU 179 ASP 180 ASP 181 ILE 182 ALA 183 LYS 184 VAL 185 ALA 186 GLU 187 GLU 188 MET 189 ARG 190 VAL 191 PRO 192 VAL 193 SER 194 LEU 195 LEU 196 LYS 197 ASP 198 VAL 199 LEU 200 GLU 201 LYS 202 GLY 203 LYS 204 LEU 205 PRO 206 VAL 207 VAL 208 ASN 209 PHE 210 ALA 211 ALA 212 GLY 213 GLY 214 VAL 215 ALA 216 THR 217 PRO 218 ALA 219 ASP 220 ALA 221 ALA 222 LEU 223 LEU 224 MET 225 GLN 226 LEU 227 GLY 228 CYS 229 ASP 230 GLY 231 VAL 232 PHE 233 VAL 234 GLY 235 SER 236 GLY 237 ILE 238 PHE 239 LYS 240 SER 241 SER 242 ASN 243 PRO 244 VAL 245 ARG 246 LEU 247 ALA 248 THR 249 ALA 250 VAL 251 VAL 252 GLU 253 ALA 254 THR 255 THR 256 HIS 257 PHE 258 ASP 259 ASN 260 PRO 261 SER 262 LYS 263 LEU 264 LEU 265 GLU 266 VAL 267 SER 268 SER 269 ASP 270 LEU 271 GLY 272 GLU 273 LEU 274
Unit 2	LEU 16 LYS 17 GLY 18 GLY 19 VAL 20 ILE 21 MET 22 ASP 23 VAL 24 VAL 25 THR 26 PRO 27 GLU 28 GLN 29 ALA 30 LYS 31 ILE 32 ALA 33 GLU 34 LYS 35 SER 36 GLY 37 ALA 38 CYS 39 ALA 40 VAL 41 MET 42 ALA 43 LEU 44 GLU 45 SER 46 ILE 47 PRO 48 ALA 49 ASP 50 MET 51 ARG 52 LYS 53 SER 54 GLY 55 LYS 56 VAL 57 CYS 58 ARG 59 MET 60 SER 61 ASP 62 PRO 63 LYS 64 MET 65 ILE 66 LYS 67 ASP 68 ILE 69 MET 70 ASN 71 SER 72 VAL 73 SER 74 ILE 75 PRO 76 VAL 77 MET 78 ALA 79 LYS 80 VAL 81 ARG 82 ILE 83 GLY 84 HIS 85 PHE 86 VAL 87 GLU 88 ALA 89 GLN 90 ILE 91 ILE 92 GLU 93 ALA 94 LEU 95 GLU 96 VAL 97 ASP 98 TYR 99 ILE 100 ASP 101 GLU 102 SER 103 GLU 104 VAL 105 LEU 106 THR 107 PRO 108 ALA 109 ASP 110 TRP 111 THR 112 HIS 113 HIS 114 ILE 115 GLU 116 LYS 117 ASP 118 LYS 119 PHE 120 LYS 121 VAL 122 PRO 123 PHE 124 VAL 125 CYS 126 GLY 127 ALA 128 LYS 129 ASP 130 LEU 131 GLY 132 GLU 133 ALA 134 LEU 135 ARG 136 ARG 137 ILE 138 ASN 139 GLU 140 GLY 141 ALA 142 ALA 143 MET 144 ILE 145 ARG 146 THR 147 LYS 148 GLY 149 GLU 150 ALA 151 GLY 152 THR 153 GLY 154 ASP 155 VAL 156 SER 157 GLU 158 ALA 159 VAL 160 LYS 161 HIS 162 ILE 163 ARG 164 ARG 165 ILE 166 THR 167 GLU 168 GLU 169 ILE 170 LYS 171 ALA 172 CYS 173 GLN 174 GLN 175 LEU 176 LYS 177 SER 178 GLU 179 ASP 180 ASP 181 ILE 182 ALA 183 LYS 184 VAL 185 ALA 186 GLU 187 GLU 188 MET 189 ARG 190 VAL 191 PRO 192 VAL 193 SER 194 LEU 195 LEU 196 LYS 197 ASP 198 VAL 199 LEU 200 GLU 201 LYS 202 GLY 203 LYS 204 LEU 205 PRO 206 VAL 207 VAL 208 ASN 209 PHE 210 ALA 211 ALA 212 GLY 213 GLY 214 VAL 215 ALA 216 THR 217 PRO 218 ALA 219 ASP 220 ALA 221 ALA 222 LEU 223 LEU 224 MET 225 GLN 226 LEU 227 GLY 228 CYS 229 ASP 230 GLY 231 VAL 232 PHE 233 VAL 234 GLY 235 SER 236 GLY 237 ILE 238 PHE 239 LYS 240 SER 241 SER 242 ASN 243 PRO 244 VAL 245 ARG 246 LEU 247 ALA 248 THR 249 ALA 250 VAL 251 VAL 252 GLU 253 ALA 254 THR 255 THR 256 HIS 257 PHE 258 ASP 259 ASN 260 PRO 261 SER 262 LYS 263 LEU 264 LEU 265 GLU 266 VAL 267 SER 268 SER 269 ASP 270 LEU 271 GLY 272
Unit 3	LEU 16 LYS 17 GLY 18 GLY 19 VAL 20 ILE 21 MET 22 ASP 23 VAL 24 VAL 25 THR 26 PRO 27 GLU 28 GLN 29 ALA 30 LYS 31 ILE 32 ALA 33 GLU 34 LYS 35 SER 36 GLY 37 ALA 38 CYS 39 ALA 40 VAL 41 MET 42 ALA 43 LEU 44 GLU 45 SER 46 ILE 47 PRO 48 ALA 49 ASP 50 MET 51 ARG 52 LYS 53 SER 54 GLY 55 LYS 56 VAL 57 CYS 58 ARG 59 MET 60 SER 61 ASP 62 PRO 63 LYS 64 MET 65 ILE 66 LYS 67 ASP 68 ILE 69 MET 70 ASN 71 SER 72 VAL 73 SER 74 ILE 75 PRO 76 VAL 77 MET 78 ALA 79 LYS 80 VAL 81 ARG 82 ILE 83 GLY 84 HIS 85 PHE 86 VAL 87 GLU 88 ALA 89 GLN 90 ILE 91 ILE 92 GLU 93 ALA 94 LEU 95 GLU 96 VAL 97 ASP 98 TYR 99 ILE 100 ASP 101 GLU 102 SER 103 GLU 104 VAL 105 LEU 106 THR 107 PRO 108 ALA 109 ASP 110 TRP 111 THR 112 HIS 113 HIS 114 ILE 115 GLU 116 LYS 117 ASP 118 LYS 119 PHE 120 LYS 121 VAL 122 PRO 123 PHE 124 VAL 125 CYS 126 GLY 127 ALA 128 LYS 129 ASP 130 LEU 131 GLY 132 GLU 133 ALA 134 LEU 135 ARG 136 ARG 137 ILE 138 ASN 139 GLU 140 GLY 141 ALA 142 ALA 143 MET 144 ILE 145 ARG 146 THR 147 LYS 148 GLY 149 GLU 150 ALA 151 GLY 152 THR 153 GLY 154 ASP 155 VAL 156 SER 157 GLU 158 ALA 159 VAL 160 LYS 161 HIS 162 ILE 163 ARG 164 ARG 165 ILE 166 THR 167 GLU 168 GLU 169 ILE 170 LYS 171 ALA 172 CYS 173 GLN 174 GLN 175 LEU 176 LYS 177 SER 178 GLU 179 ASP 180 ASP 181 ILE 182 ALA 183 LYS 184 VAL 185 ALA 186 GLU 187 GLU 188 MET 189 ARG 190 VAL 191 PRO 192 VAL 193 SER 194 LEU 195 LEU 196 LYS 197 ASP 198 VAL 199 LEU 200 GLU 201 LYS 202 GLY 203 LYS 204 LEU 205 PRO 206 VAL 207 VAL 208 ASN 209 PHE 210 ALA 211 ALA 212 GLY 213 GLY 214 VAL 215 ALA 216 THR 217 PRO 218 ALA 219 ASP 220 ALA 221 ALA 222 LEU 223 LEU 224 MET 225 GLN 226 LEU 227 GLY 228 CYS 229 ASP 230 GLY 231 VAL 232 PHE 233 VAL 234 GLY 235 SER 236 GLY 237 ILE 238 PHE 239 LYS 240 SER 241 SER 242 ASN 243 PRO 244 VAL 245 ARG 246 LEU 247 ALA 248 THR 249 ALA 250 VAL 251 VAL 252 GLU 253 ALA 254 THR 255 THR 256 HIS 257 PHE 258 ASP 259 ASN 260 PRO 261 SER 262 LYS 263 LEU 264 LEU 265 GLU 266 VAL 267 SER 268 SER 269 ASP 270 LEU 271 GLY 272 GLU 273 LEU 274

Ligands

Unit 4	G3H 1
Unit 5	G3H 1
Unit 6	G3H 1