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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE AND FUNCTION OF THE POLYMERASE CORE OF TRAMP, A RN SURVEILLANCE COMPLEX
Keywords POLYA RNA POLYMERASE, ZINC KNUCKLE PROTEIN, RNA SURVEILLANCE BINDS TO TRF4P/AIR2P HETERODIMER, TRANSFERASE-RNA BINDING P COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3NYB     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POLY(A) RNA POLYMERASE PROTEIN 2  A 323 2577 0
2  Protein   PROTEIN AIR2  B 64 502 0
3  Ligand   PROTEIN AIR2  B 2 0 2
4 Water     58 0 58
total       447 3079 60
Proteins
Unit 1 GLY159 SER160 TYR161 PRO162 TRP163 ILE164 LEU165 ASN166 HIS167 ASP168 HIS169 SER170 LYS171 GLN172 LYS173 GLU174 ILE175 SER176 ASP177 TRP178 LEU179 THR180 PHE181 GLU182 ILE183 LYS184 ASP185 PHE186 VAL187 ALA188 TYR189 ILE190 SER191 PRO192 SER193 ARG194 GLU195 GLU196 ILE197 GLU198 ILE199 ARG200 ASN201 GLN202 THR203 ILE204 SER205 THR206 ILE207 ARG208 GLU209 ALA210 VAL211 LYS212 GLN213 LEU214 TRP215 PRO216 ASP217 ALA218 ASP219 LEU220 HIS221 VAL222 PHE223 GLY224 SER225 TYR226 SER227 THR228 ASP229 LEU230 TYR231 LEU232 PRO233 GLY234 SER235 ASP236 ILE237 ASP238 CYS239 VAL240 VAL241 THR242 SER243 GLU244 LEU245 GLY246 GLY247 LYS248 GLU249 SER250 ARG251 ASN252 ASN253 LEU254 TYR255 SER256 LEU257 ALA258 SER259 HIS260 LEU261 LYS262 LYS263 LYS264 ASN265 LEU266 ALA267 THR268 GLU269 VAL270 GLU271 VAL272 VAL273 ALA274 LYS275 ALA276 ARG277 VAL278 PRO279 ILE280 ILE281 LYS282 PHE283 VAL284 GLU285 PRO286 HIS287 SER288 GLY289 ILE290 HIS291 ILE292 ALA293 VAL294 SER295 PHE296 GLU297 ARG298 THR299 ASN300 GLY301 ILE302 GLU303 ALA304 ALA305 LYS306 LEU307 ILE308 ARG309 GLU310 TRP311 LEU312 ASP313 ASP314 THR315 PRO316 GLY317 LEU318 ARG319 GLU320 LEU321 VAL322 LEU323 ILE324 VAL325 LYS326 GLN327 PHE328 LEU329 HIS330 ALA331 ARG332 ARG333 LEU334 ASN335 ASN336 VAL337 HIS338 THR339 GLY340 GLY341 LEU342 GLY343 GLY344 PHE345 SER346 ILE347 ILE348 CYS349 LEU350 VAL351 PHE352 SER353 PHE354 LEU355 HIS356 MET357 HIS358 PRO359 ARG360 ILE361 ILE362 THR363 ASN364 GLU365 ILE366 ASP367 PRO368 LYS369 ASP370 ASN371 LEU372 GLY373 VAL374 LEU375 LEU376 ILE377 GLU378 PHE379 PHE380 GLU381 LEU382 TYR383 GLY384 LYS385 ASN386 PHE387 GLY388 TYR389 ASP390 ASP391 VAL392 ALA393 LEU394 GLY395 SER396 SER397 ASP398 GLY399 TYR400 PRO401 VAL402 TYR403 PHE404 PRO405 LYS406 SER407 THR408 TRP409 SER410 ALA411 ILE412 GLN413 PRO414 ILE415 LYS416 ASN417 PRO418 PHE419 SER420 LEU421 ALA422 ILE423 GLN424 ASP425 PRO426 GLY427 ASP428 GLU429 SER430 ASN431 ASN432 ILE433 SER434 ARG435 GLY436 SER437 PHE438 ASN439 ILE440 ARG441 ASP442 ILE443 LYS444 LYS445 ALA446 PHE447 ALA448 GLY449 ALA450 PHE451 ASP452 LEU453 LEU454 THR455 ASN456 ARG457 CYS458 PHE459 GLU460 LEU461 HIS462 SER463 ALA464 THR465 PHE466 LYS467 ASP468 ARG469 LEU470 GLY471 LYS472 SER473 ILE474 LEU475 GLY476 ASN477 VAL478 ILE479 LYS480 TYR481
Unit 2 GLN122 CYS123 THR124 LEU125 CYS126 LYS127 SER128 LYS129 LYS130 HIS131 SER132 LYS133 GLU134 ARG135 CYS136 PRO137 SER138 ILE139 TRP140 ARG141 ALA142 TYR143 ILE144 LEU145 VAL146 HIS160 THR161 ILE162 TYR163 CYS164 TYR165 ASN166 CYS167 GLY168 GLY169 LYS170 GLY171 HIS172 PHE173 GLY174 ASP175 ASP176 CYS177 LYS178 GLU179 LYS180 ARG181 SER182 SER183 ARG184 VAL185 PRO186 ASN187 GLU188 ASP189 GLY190 SER191 ALA192 PHE193 THR194 GLY195 SER196 ASN197 LEU198
Ligands
Unit 3 ZN2147 ZN2148
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany