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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE UBR-BOX OF UBR2 UBIQUITIN LIGASE
Keywords ZINC FINGER-LIKE, UBIQUITIN LIGASE, LIGASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3NY2     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   E3 UBIQUITIN-PROTEIN LIGASE UBR2  A 72 546 0
2  Protein   E3 UBIQUITIN-PROTEIN LIGASE UBR2  B 72 544 0
3  Protein   E3 UBIQUITIN-PROTEIN LIGASE UBR2  C 71 527 0
4  Protein   E3 UBIQUITIN-PROTEIN LIGASE UBR2  D 73 542 0
5  Protein   E3 UBIQUITIN-PROTEIN LIGASE UBR2  E 70 513 0
6  Protein   E3 UBIQUITIN-PROTEIN LIGASE UBR2  F 72 539 0
7  Protein   E3 UBIQUITIN-PROTEIN LIGASE UBR2  G 73 548 0
8  Protein   E3 UBIQUITIN-PROTEIN LIGASE UBR2  H 72 538 0
9  Ligand   E3 UBIQUITIN-PROTEIN LIGASE UBR2  A 3 0 3
10  Ligand   E3 UBIQUITIN-PROTEIN LIGASE UBR2  B 3 0 3
11  Ligand   E3 UBIQUITIN-PROTEIN LIGASE UBR2  C 3 0 3
12  Ligand   E3 UBIQUITIN-PROTEIN LIGASE UBR2  D 3 0 3
13  Ligand   E3 UBIQUITIN-PROTEIN LIGASE UBR2  E 3 0 3
14  Ligand   E3 UBIQUITIN-PROTEIN LIGASE UBR2  F 3 0 3
15  Ligand   E3 UBIQUITIN-PROTEIN LIGASE UBR2  G 3 0 3
16  Ligand   E3 UBIQUITIN-PROTEIN LIGASE UBR2  H 3 0 3
17 Water     36 0 36
total       635 4297 60

Proteins
Unit 1 GLY96 SER97 LEU98 CYS99 GLY100 ARG101 VAL102 PHE103 LYS104 VAL105 GLY106 GLU107 PRO108 THR109 TYR110 SER111 CYS112 ARG113 ASP114 CYS115 ALA116 VAL117 ASP118 PRO119 THR120 CYS121 VAL122 LEU123 CYS124 MET125 GLU126 CYS127 PHE128 LEU129 GLY130 SER131 ILE132 HIS133 ARG134 ASP135 HIS136 ARG137 TYR138 ARG139 MET140 THR141 THR142 SER143 GLY144 GLY145 GLY146 GLY147 PHE148 CYS149 ASP150 CYS151 GLY152 ASP153 THR154 GLU155 ALA156 TRP157 LYS158 GLU159 GLY160 PRO161 TYR162 CYS163 GLN164 LYS165 HIS166 GLU167
Unit 2 GLY96 SER97 LEU98 CYS99 GLY100 ARG101 VAL102 PHE103 LYS104 VAL105 GLY106 GLU107 PRO108 THR109 TYR110 SER111 CYS112 ARG113 ASP114 CYS115 ALA116 VAL117 ASP118 PRO119 THR120 CYS121 VAL122 LEU123 CYS124 MET125 GLU126 CYS127 PHE128 LEU129 GLY130 SER131 ILE132 HIS133 ARG134 ASP135 HIS136 ARG137 TYR138 ARG139 MET140 THR141 THR142 SER143 GLY144 GLY145 GLY146 GLY147 PHE148 CYS149 ASP150 CYS151 GLY152 ASP153 THR154 GLU155 ALA156 TRP157 LYS158 GLU159 GLY160 PRO161 TYR162 CYS163 GLN164 LYS165 HIS166 GLU167
Unit 3 SER97 LEU98 CYS99 GLY100 ARG101 VAL102 PHE103 LYS104 VAL105 GLY106 GLU107 PRO108 THR109 TYR110 SER111 CYS112 ARG113 ASP114 CYS115 ALA116 VAL117 ASP118 PRO119 THR120 CYS121 VAL122 LEU123 CYS124 MET125 GLU126 CYS127 PHE128 LEU129 GLY130 SER131 ILE132 HIS133 ARG134 ASP135 HIS136 ARG137 TYR138 ARG139 MET140 THR141 THR142 SER143 GLY144 GLY145 GLY146 GLY147 PHE148 CYS149 ASP150 CYS151 GLY152 ASP153 THR154 GLU155 ALA156 TRP157 LYS158 GLU159 GLY160 PRO161 TYR162 CYS163 GLN164 LYS165 HIS166 GLU167
Unit 4 LEU95 GLY96 SER97 LEU98 CYS99 GLY100 ARG101 VAL102 PHE103 LYS104 VAL105 GLY106 GLU107 PRO108 THR109 TYR110 SER111 CYS112 ARG113 ASP114 CYS115 ALA116 VAL117 ASP118 PRO119 THR120 CYS121 VAL122 LEU123 CYS124 MET125 GLU126 CYS127 PHE128 LEU129 GLY130 SER131 ILE132 HIS133 ARG134 ASP135 HIS136 ARG137 TYR138 ARG139 MET140 THR141 THR142 SER143 GLY144 GLY145 GLY146 GLY147 PHE148 CYS149 ASP150 CYS151 GLY152 ASP153 THR154 GLU155 ALA156 TRP157 LYS158 GLU159 GLY160 PRO161 TYR162 CYS163 GLN164 LYS165 HIS166 GLU167
Unit 5 LEU98 CYS99 GLY100 ARG101 VAL102 PHE103 LYS104 VAL105 GLY106 GLU107 PRO108 THR109 TYR110 SER111 CYS112 ARG113 ASP114 CYS115 ALA116 VAL117 ASP118 PRO119 THR120 CYS121 VAL122 LEU123 CYS124 MET125 GLU126 CYS127 PHE128 LEU129 GLY130 SER131 ILE132 HIS133 ARG134 ASP135 HIS136 ARG137 TYR138 ARG139 MET140 THR141 THR142 SER143 GLY144 GLY145 GLY146 GLY147 PHE148 CYS149 ASP150 CYS151 GLY152 ASP153 THR154 GLU155 ALA156 TRP157 LYS158 GLU159 GLY160 PRO161 TYR162 CYS163 GLN164 LYS165 HIS166 GLU167
Unit 6 GLY96 SER97 LEU98 CYS99 GLY100 ARG101 VAL102 PHE103 LYS104 VAL105 GLY106 GLU107 PRO108 THR109 TYR110 SER111 CYS112 ARG113 ASP114 CYS115 ALA116 VAL117 ASP118 PRO119 THR120 CYS121 VAL122 LEU123 CYS124 MET125 GLU126 CYS127 PHE128 LEU129 GLY130 SER131 ILE132 HIS133 ARG134 ASP135 HIS136 ARG137 TYR138 ARG139 MET140 THR141 THR142 SER143 GLY144 GLY145 GLY146 GLY147 PHE148 CYS149 ASP150 CYS151 GLY152 ASP153 THR154 GLU155 ALA156 TRP157 LYS158 GLU159 GLY160 PRO161 TYR162 CYS163 GLN164 LYS165 HIS166 GLU167
Unit 7 LEU95 GLY96 SER97 LEU98 CYS99 GLY100 ARG101 VAL102 PHE103 LYS104 VAL105 GLY106 GLU107 PRO108 THR109 TYR110 SER111 CYS112 ARG113 ASP114 CYS115 ALA116 VAL117 ASP118 PRO119 THR120 CYS121 VAL122 LEU123 CYS124 MET125 GLU126 CYS127 PHE128 LEU129 GLY130 SER131 ILE132 HIS133 ARG134 ASP135 HIS136 ARG137 TYR138 ARG139 MET140 THR141 THR142 SER143 GLY144 GLY145 GLY146 GLY147 PHE148 CYS149 ASP150 CYS151 GLY152 ASP153 THR154 GLU155 ALA156 TRP157 LYS158 GLU159 GLY160 PRO161 TYR162 CYS163 GLN164 LYS165 HIS166 GLU167
Unit 8 GLY96 SER97 LEU98 CYS99 GLY100 ARG101 VAL102 PHE103 LYS104 VAL105 GLY106 GLU107 PRO108 THR109 TYR110 SER111 CYS112 ARG113 ASP114 CYS115 ALA116 VAL117 ASP118 PRO119 THR120 CYS121 VAL122 LEU123 CYS124 MET125 GLU126 CYS127 PHE128 LEU129 GLY130 SER131 ILE132 HIS133 ARG134 ASP135 HIS136 ARG137 TYR138 ARG139 MET140 THR141 THR142 SER143 GLY144 GLY145 GLY146 GLY147 PHE148 CYS149 ASP150 CYS151 GLY152 ASP153 THR154 GLU155 ALA156 TRP157 LYS158 GLU159 GLY160 PRO161 TYR162 CYS163 GLN164 LYS165 HIS166 GLU167

Ligands
Unit 9 ZN1 ZN2 ZN3
Unit 10 ZN4 ZN5 ZN6
Unit 11 ZN7 ZN8 ZN9
Unit 12 ZN10 ZN11 ZN12
Unit 13 ZN13 ZN14 ZN15
Unit 14 ZN16 ZN17 ZN18
Unit 15 ZN19 ZN20 ZN21
Unit 16 ZN22 ZN23 ZN24

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany