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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE AND ALLOSTERIC REGULATION OF THE URIDINE MONOPHOSP KINASE FROM MYCOBACTERIUM TUBERCULOSIS
Keywords ALLOSTERICALLY ACTIVATED FORM, AAK FOLD, UMP KINASE, TRANSFE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3NWY     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   URIDYLATE KINASE  A 227 1666 0
2  Protein   URIDYLATE KINASE  B 231 1695 0
3  Protein   URIDYLATE KINASE  C 230 1685 0
4  Protein   URIDYLATE KINASE  D 230 1703 0
5  Protein   URIDYLATE KINASE  E 220 1601 0
6  Protein   URIDYLATE KINASE  F 226 1637 0
7  Ligand   URIDYLATE KINASE  A 1 0 32
8  Ligand   URIDYLATE KINASE  B 2 0 57
9  Ligand   URIDYLATE KINASE  C 1 0 32
10  Ligand   URIDYLATE KINASE  D 1 0 32
11  Ligand   URIDYLATE KINASE  E 1 0 32
12  Ligand   URIDYLATE KINASE  F 1 0 32
13 Water     142 0 142
total       1513 9987 359
Proteins
Unit 1 LEU27 SER28 GLY29 TYR30 SER31 ARG32 VAL33 LEU34 LEU35 LYS36 LEU37 GLY38 GLY39 GLU40 MET41 PHE42 GLY43 GLY44 GLY45 GLN46 VAL47 GLY48 LEU49 ASP50 PRO51 ASP52 VAL53 VAL54 ALA55 GLN56 VAL57 ALA58 ARG59 GLN60 ILE61 ALA62 ASP63 VAL64 VAL65 ARG66 GLY67 GLY68 VAL69 GLN70 ILE71 ALA72 VAL73 VAL74 ILE75 GLY76 GLY77 GLY78 ASN79 PHE80 ALA84 GLN85 LEU86 GLN87 GLN88 LEU89 GLY90 MET91 GLU92 ARG93 THR94 ARG95 SER96 ASP97 TYR98 MET99 GLY100 MET101 LEU102 GLY103 THR104 VAL105 MET106 ASN107 SER108 LEU109 ALA110 LEU111 GLN112 ASP113 PHE114 LEU115 GLU116 LYS117 GLU118 GLY119 ILE120 VAL121 THR122 ARG123 VAL124 GLN125 THR126 ALA127 ILE128 THR129 MET130 GLY131 GLN132 VAL133 ALA134 GLU135 PRO136 TYR137 LEU138 PRO139 LEU140 ARG141 ALA142 VAL143 ARG144 HIS145 LEU146 GLU147 LYS148 GLY149 ARG150 VAL151 VAL152 ILE153 PHE154 GLY155 ALA156 GLY157 MET158 GLY159 LEU160 PRO161 TYR162 PHE163 SER164 THR165 ASP166 THR167 THR168 ALA169 ALA170 GLN171 ARG172 ALA173 LEU174 GLU175 ILE176 GLY177 ALA178 ASP179 VAL180 VAL181 LEU182 MET183 ALA184 LYS185 ALA186 VAL187 ASP188 GLY189 VAL190 PHE191 ALA192 GLU193 PRO199 GLU200 ALA201 GLU202 LEU203 LEU204 THR205 ALA206 VAL207 SER208 HIS209 ARG210 GLU211 VAL212 LEU213 ASP214 ARG215 GLY216 LEU217 ARG218 VAL219 ALA220 ASP221 ALA222 THR223 ALA224 PHE225 SER226 LEU227 CYS228 MET229 ASP230 ASN231 GLY232 MET233 PRO234 ILE235 LEU236 VAL237 PHE238 ASN239 LEU240 LEU241 THR242 ASP243 GLY244 ASN245 ILE246 ALA247 ARG248 ALA249 VAL250 ARG251 GLY252 GLU253 LYS254 ILE255 GLY256 THR257 LEU258 VAL259 THR260 THR261
Unit 2 GLN26 LEU27 SER28 GLY29 TYR30 SER31 ARG32 VAL33 LEU34 LEU35 LYS36 LEU37 GLY38 GLY39 GLU40 MET41 PHE42 GLY43 GLY44 GLY45 GLN46 VAL47 GLY48 LEU49 ASP50 PRO51 ASP52 VAL53 VAL54 ALA55 GLN56 VAL57 ALA58 ARG59 GLN60 ILE61 ALA62 ASP63 VAL64 VAL65 ARG66 GLY67 GLY68 VAL69 GLN70 ILE71 ALA72 VAL73 VAL74 ILE75 GLY76 GLY77 GLY78 ASN79 PHE80 PHE81 ARG82 GLY83 ALA84 GLN85 LEU86 GLN87 GLN88 LEU89 GLY90 MET91 GLU92 ARG93 THR94 ARG95 SER96 ASP97 TYR98 MET99 GLY100 MET101 LEU102 GLY103 THR104 VAL105 MET106 ASN107 SER108 LEU109 ALA110 LEU111 GLN112 ASP113 PHE114 LEU115 GLU116 LYS117 GLU118 GLY119 ILE120 VAL121 THR122 ARG123 VAL124 GLN125 THR126 ALA127 ILE128 THR129 MET130 GLY131 GLN132 VAL133 ALA134 GLU135 PRO136 TYR137 LEU138 PRO139 LEU140 ARG141 ALA142 VAL143 ARG144 HIS145 LEU146 GLU147 LYS148 GLY149 ARG150 VAL151 VAL152 ILE153 PHE154 GLY155 ALA156 GLY157 MET158 GLY159 LEU160 PRO161 TYR162 PHE163 SER164 THR165 ASP166 THR167 THR168 ALA169 ALA170 GLN171 ARG172 ALA173 LEU174 GLU175 ILE176 GLY177 ALA178 ASP179 VAL180 VAL181 LEU182 MET183 ALA184 LYS185 ALA186 VAL187 ASP188 GLY189 VAL190 PHE191 ALA192 GLU193 ASP194 PRO195 ALA201 GLU202 LEU203 LEU204 THR205 ALA206 VAL207 SER208 HIS209 ARG210 GLU211 VAL212 LEU213 ASP214 ARG215 GLY216 LEU217 ARG218 VAL219 ALA220 ASP221 ALA222 THR223 ALA224 PHE225 SER226 LEU227 CYS228 MET229 ASP230 ASN231 GLY232 MET233 PRO234 ILE235 LEU236 VAL237 PHE238 ASN239 LEU240 LEU241 THR242 ASP243 GLY244 ASN245 ILE246 ALA247 ARG248 ALA249 VAL250 ARG251 GLY252 GLU253 LYS254 ILE255 GLY256 THR257 LEU258 VAL259 THR260 THR261
Unit 3 SER28 GLY29 TYR30 SER31 ARG32 VAL33 LEU34 LEU35 LYS36 LEU37 GLY38 GLY39 GLU40 MET41 PHE42 GLY43 GLY44 GLY45 GLN46 VAL47 GLY48 LEU49 ASP50 PRO51 ASP52 VAL53 VAL54 ALA55 GLN56 VAL57 ALA58 ARG59 GLN60 ILE61 ALA62 ASP63 VAL64 VAL65 ARG66 GLY67 GLY68 VAL69 GLN70 ILE71 ALA72 VAL73 VAL74 ILE75 GLY76 GLY77 GLY78 ASN79 PHE80 PHE81 ARG82 GLY83 ALA84 GLN85 LEU86 GLN87 GLN88 LEU89 GLY90 MET91 GLU92 ARG93 THR94 ARG95 SER96 ASP97 TYR98 MET99 GLY100 MET101 LEU102 GLY103 THR104 VAL105 MET106 ASN107 SER108 LEU109 ALA110 LEU111 GLN112 ASP113 PHE114 LEU115 GLU116 LYS117 GLU118 GLY119 ILE120 VAL121 THR122 ARG123 VAL124 GLN125 THR126 ALA127 ILE128 THR129 MET130 GLY131 GLN132 VAL133 ALA134 GLU135 PRO136 TYR137 LEU138 PRO139 LEU140 ARG141 ALA142 VAL143 ARG144 HIS145 LEU146 GLU147 LYS148 GLY149 ARG150 VAL151 VAL152 ILE153 PHE154 GLY155 ALA156 GLY157 MET158 GLY159 LEU160 PRO161 TYR162 PHE163 SER164 THR165 ASP166 THR167 THR168 ALA169 ALA170 GLN171 ARG172 ALA173 LEU174 GLU175 ILE176 GLY177 ALA178 ASP179 VAL180 VAL181 LEU182 MET183 ALA184 LYS185 ALA186 VAL187 ASP188 GLY189 VAL190 PHE191 ALA192 GLU193 ASP194 PRO195 ARG196 ALA201 GLU202 LEU203 LEU204 THR205 ALA206 VAL207 SER208 HIS209 ARG210 GLU211 VAL212 LEU213 ASP214 ARG215 GLY216 LEU217 ARG218 VAL219 ALA220 ASP221 ALA222 THR223 ALA224 PHE225 SER226 LEU227 CYS228 MET229 ASP230 ASN231 GLY232 MET233 PRO234 ILE235 LEU236 VAL237 PHE238 ASN239 LEU240 LEU241 THR242 ASP243 GLY244 ASN245 ILE246 ALA247 ARG248 ALA249 VAL250 ARG251 GLY252 GLU253 LYS254 ILE255 GLY256 THR257 LEU258 VAL259 THR260 THR261
Unit 4 SER28 GLY29 TYR30 SER31 ARG32 VAL33 LEU34 LEU35 LYS36 LEU37 GLY38 GLY39 GLU40 MET41 PHE42 GLY43 GLY44 GLY45 GLN46 VAL47 GLY48 LEU49 ASP50 PRO51 ASP52 VAL53 VAL54 ALA55 GLN56 VAL57 ALA58 ARG59 GLN60 ILE61 ALA62 ASP63 VAL64 VAL65 ARG66 GLY67 GLY68 VAL69 GLN70 ILE71 ALA72 VAL73 VAL74 ILE75 GLY76 GLY77 GLY78 ASN79 PHE80 GLN85 LEU86 GLN87 GLN88 LEU89 GLY90 MET91 GLU92 ARG93 THR94 ARG95 SER96 ASP97 TYR98 MET99 GLY100 MET101 LEU102 GLY103 THR104 VAL105 MET106 ASN107 SER108 LEU109 ALA110 LEU111 GLN112 ASP113 PHE114 LEU115 GLU116 LYS117 GLU118 GLY119 ILE120 VAL121 THR122 ARG123 VAL124 GLN125 THR126 ALA127 ILE128 THR129 MET130 GLY131 GLN132 VAL133 ALA134 GLU135 PRO136 TYR137 LEU138 PRO139 LEU140 ARG141 ALA142 VAL143 ARG144 HIS145 LEU146 GLU147 LYS148 GLY149 ARG150 VAL151 VAL152 ILE153 PHE154 GLY155 ALA156 GLY157 MET158 GLY159 LEU160 PRO161 TYR162 PHE163 SER164 THR165 ASP166 THR167 THR168 ALA169 ALA170 GLN171 ARG172 ALA173 LEU174 GLU175 ILE176 GLY177 ALA178 ASP179 VAL180 VAL181 LEU182 MET183 ALA184 LYS185 ALA186 VAL187 ASP188 GLY189 VAL190 PHE191 ALA192 GLU193 ASP194 PRO195 ARG196 VAL197 ASN198 PRO199 GLU200 ALA201 GLU202 LEU203 LEU204 THR205 ALA206 VAL207 SER208 HIS209 ARG210 GLU211 VAL212 LEU213 ASP214 ARG215 GLY216 LEU217 ARG218 VAL219 ALA220 ASP221 ALA222 THR223 ALA224 PHE225 SER226 LEU227 CYS228 MET229 ASP230 ASN231 GLY232 MET233 PRO234 ILE235 LEU236 VAL237 PHE238 ASN239 LEU240 LEU241 THR242 ASP243 GLY244 ASN245 ILE246 ALA247 ARG248 ALA249 VAL250 ARG251 GLY252 GLU253 LYS254 ILE255 GLY256 THR257 LEU258 VAL259 THR260 THR261
Unit 5 SER28 GLY29 TYR30 SER31 ARG32 VAL33 LEU34 LEU35 LYS36 LEU37 GLY38 GLY39 GLU40 MET41 PHE42 GLY43 GLY44 GLY45 GLN46 VAL47 GLY48 LEU49 ASP50 PRO51 ASP52 VAL53 VAL54 ALA55 GLN56 VAL57 ALA58 ARG59 GLN60 ILE61 ALA62 ASP63 VAL64 VAL65 ARG66 GLY67 GLY68 VAL69 GLN70 ILE71 ALA72 VAL73 VAL74 ILE75 GLY76 GLY77 GLY78 ASN79 PHE80 PHE81 ARG82 GLY83 ALA84 GLN85 LEU86 GLN87 GLN88 LEU89 GLY90 MET91 GLU92 ARG93 THR94 ARG95 SER96 ASP97 TYR98 MET99 GLY100 MET101 LEU102 GLY103 THR104 VAL105 MET106 ASN107 SER108 LEU109 ALA110 LEU111 GLN112 ASP113 PHE114 LEU115 GLU116 LYS117 GLU118 GLY119 ILE120 VAL121 THR122 ARG123 VAL124 GLN125 THR126 ALA127 ILE128 THR129 MET130 GLY131 GLN132 VAL133 ALA134 GLU135 PRO136 TYR137 LEU138 PRO139 LEU140 ARG141 ALA142 VAL143 ARG144 HIS145 LEU146 GLU147 LYS148 GLY149 ARG150 VAL151 VAL152 ILE153 PHE154 GLY155 ALA156 GLY157 MET158 GLY159 LEU160 PRO161 TYR162 PHE163 SER164 THR165 ASP166 THR167 THR168 ALA169 ALA170 GLN171 ARG172 ALA173 LEU174 GLU175 ILE176 GLY177 ALA178 ASP179 VAL180 VAL181 LEU182 MET183 ALA184 LYS185 ALA186 VAL187 ASP188 GLY189 VAL190 LEU204 THR205 ALA206 VAL207 SER208 HIS209 ARG210 GLU211 VAL212 LEU213 ASP214 ARG215 GLY216 LEU217 ARG218 ALA220 ASP221 ALA222 THR223 ALA224 PHE225 SER226 LEU227 CYS228 MET229 ASP230 ASN231 GLY232 MET233 PRO234 ILE235 LEU236 VAL237 PHE238 ASN239 LEU240 LEU241 THR242 ASP243 GLY244 ASN245 ILE246 ALA247 ARG248 ALA249 VAL250 ARG251 GLY252 GLU253 LYS254 ILE255 GLY256 THR257 LEU258 VAL259 THR260 THR261
Unit 6 GLY29 TYR30 SER31 ARG32 VAL33 LEU34 LEU35 LYS36 LEU37 GLY38 GLY39 GLU40 MET41 PHE42 GLY43 GLY44 GLY45 GLN46 VAL47 GLY48 LEU49 ASP50 PRO51 ASP52 VAL53 VAL54 ALA55 GLN56 VAL57 ALA58 ARG59 GLN60 ILE61 ALA62 ASP63 VAL64 VAL65 ARG66 GLY67 GLY68 VAL69 GLN70 ILE71 ALA72 VAL73 VAL74 ILE75 GLY76 GLY77 GLY78 ASN79 PHE80 PHE81 ARG82 GLY83 ALA84 GLN85 LEU86 GLN87 GLN88 LEU89 GLY90 MET91 GLU92 ARG93 THR94 ARG95 SER96 ASP97 TYR98 MET99 GLY100 MET101 LEU102 GLY103 THR104 VAL105 MET106 ASN107 SER108 LEU109 ALA110 LEU111 GLN112 ASP113 PHE114 LEU115 GLU116 LYS117 GLU118 GLY119 ILE120 VAL121 THR122 ARG123 VAL124 GLN125 THR126 ALA127 ILE128 THR129 MET130 GLY131 GLN132 VAL133 ALA134 GLU135 PRO136 TYR137 LEU138 PRO139 LEU140 ARG141 ALA142 VAL143 ARG144 HIS145 LEU146 GLU147 LYS148 GLY149 ARG150 VAL151 VAL152 ILE153 PHE154 GLY155 ALA156 GLY157 MET158 GLY159 LEU160 PRO161 TYR162 PHE163 SER164 THR165 ASP166 THR167 THR168 ALA169 ALA170 GLN171 ARG172 ALA173 LEU174 GLU175 ILE176 GLY177 ALA178 ASP179 VAL180 VAL181 LEU182 MET183 ALA184 LYS185 ALA186 VAL187 ASP188 GLY189 VAL190 PHE191 ALA192 GLU193 ASP194 GLU202 LEU203 LEU204 THR205 ALA206 VAL207 SER208 HIS209 ARG210 GLU211 VAL212 LEU213 ASP214 ARG215 GLY216 LEU217 ARG218 VAL219 ALA220 ASP221 ALA222 THR223 ALA224 PHE225 SER226 LEU227 CYS228 MET229 ASP230 ASN231 GLY232 MET233 PRO234 ILE235 LEU236 VAL237 PHE238 ASN239 LEU240 LEU241 THR242 ASP243 GLY244 ASN245 ILE246 ALA247 ARG248 ALA249 VAL250 ARG251 GLY252 GLU253 LYS254 ILE255 GLY256 THR257 LEU258 VAL259 THR260 THR261
Ligands
Unit 7 GTP262
Unit 8 GTP262 UDP263
Unit 9 GTP262
Unit 10 GTP262
Unit 11 GTP262
Unit 12 GTP262
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany